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NC_007623.1__YP_418231.1__PPEV_gp198__00198

Bact-Vir

NC_007623.1__YP_418231.1__PPEV_gp198__00198

Identity

Accession:
NC_007623 ↗
Kingdom:
phage

Quality

86.9 mean pLDDT

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 36-49_72-117_147-270
PDB
CATH (43)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4dywA00 3.90.79.10 Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › Nucleoside Triphosphate Pyrophosphohydrolase 0.82 56.0 6.70e-01 89.1% 98.4%
2fkbC00 3.90.79.10 Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › Nucleoside Triphosphate Pyrophosphohydrolase 0.82 58.0 6.15e-01 90.2% 79.6%
3grnA00 3.90.79.10 Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › Nucleoside Triphosphate Pyrophosphohydrolase 0.82 58.0 6.67e-01 90.2% 96.4%
1ktgA00 3.90.79.10 Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › Nucleoside Triphosphate Pyrophosphohydrolase 0.81 59.0 6.83e-01 92.4% 100.0%
5zrcA00 3.90.79.10 Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › Nucleoside Triphosphate Pyrophosphohydrolase 0.81 54.0 6.58e-01 89.7% 100.0%
4nfwF00 3.90.79.10 Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › Nucleoside Triphosphate Pyrophosphohydrolase 0.80 57.0 6.22e-01 91.3% 86.3%
3hhjB00 3.90.79.10 Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › Nucleoside Triphosphate Pyrophosphohydrolase 0.80 56.0 6.63e-01 89.1% 99.2%
3eesA00 3.90.79.10 Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › Nucleoside Triphosphate Pyrophosphohydrolase 0.80 56.0 6.54e-01 90.2% 98.5%
1vc9A01 3.90.79.10 Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › Nucleoside Triphosphate Pyrophosphohydrolase 0.80 52.0 6.42e-01 89.7% 100.0%
2o5fB00 3.90.79.10 Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › Nucleoside Triphosphate Pyrophosphohydrolase 0.80 58.0 6.18e-01 88.0% 84.0%
3gz8C01 3.90.79.10 Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › Nucleoside Triphosphate Pyrophosphohydrolase 0.80 58.0 6.68e-01 91.3% 100.0%
4k6eA00 3.90.79.10 Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › Nucleoside Triphosphate Pyrophosphohydrolase 0.79 59.0 6.68e-01 92.4% 97.9%
6uufA01 3.90.79.10 Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › Nucleoside Triphosphate Pyrophosphohydrolase 0.79 59.0 6.46e-01 90.2% 92.1%
2yyhA00 3.90.79.10 Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › Nucleoside Triphosphate Pyrophosphohydrolase 0.78 55.0 6.33e-01 90.2% 95.7%
2qjoB02 3.90.79.10 Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › Nucleoside Triphosphate Pyrophosphohydrolase 0.78 58.0 6.49e-01 90.8% 96.6%
1x51A01 3.90.79.10 Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › Nucleoside Triphosphate Pyrophosphohydrolase 0.77 57.0 6.41e-01 92.4% 96.5%
5deqA01 3.90.79.10 Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › Nucleoside Triphosphate Pyrophosphohydrolase 0.77 54.0 6.17e-01 89.7% 93.5%
2b0vA00 3.90.79.10 Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › Nucleoside Triphosphate Pyrophosphohydrolase 0.77 55.0 6.13e-01 91.3% 91.2%
4kyxA00 3.90.79.10 Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › Nucleoside Triphosphate Pyrophosphohydrolase 0.76 55.0 6.35e-01 89.1% 97.8%
3a6sA00 3.90.79.10 Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › Nucleoside Triphosphate Pyrophosphohydrolase 0.76 50.0 6.07e-01 89.7% 98.4%
1sjyA00 3.90.79.10 Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › Nucleoside Triphosphate Pyrophosphohydrolase 0.76 56.0 6.15e-01 91.8% 90.9%
1v8wA00 3.90.79.10 Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › Nucleoside Triphosphate Pyrophosphohydrolase 0.76 53.0 5.83e-01 89.7% 85.7%
3gg6A00 3.90.79.10 Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › Nucleoside Triphosphate Pyrophosphohydrolase 0.75 53.0 5.99e-01 92.4% 91.7%
3fk9A00 3.90.79.10 Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › Nucleoside Triphosphate Pyrophosphohydrolase 0.75 52.0 5.73e-01 90.8% 85.0%
2w4eA00 3.90.79.10 Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › Nucleoside Triphosphate Pyrophosphohydrolase 0.75 53.0 6.10e-01 91.8% 97.1%
2b06A00 3.90.79.10 Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › Nucleoside Triphosphate Pyrophosphohydrolase 0.74 50.0 5.48e-01 88.6% 82.7%
3i9xA00 3.90.79.10 Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › Nucleoside Triphosphate Pyrophosphohydrolase 0.74 60.0 6.54e-01 92.4% 98.7%
6scxA02 3.90.79.10 Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › Nucleoside Triphosphate Pyrophosphohydrolase 0.74 53.0 6.11e-01 88.6% 100.0%
1vhzA01 3.90.79.10 Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › Nucleoside Triphosphate Pyrophosphohydrolase 0.74 55.0 5.60e-01 91.8% 78.7%
4ktbA00 3.90.79.10 Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › Nucleoside Triphosphate Pyrophosphohydrolase 0.73 58.0 6.25e-01 90.2% 95.0%
3rh7A02 3.90.79.10 Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › Nucleoside Triphosphate Pyrophosphohydrolase 0.73 49.0 5.84e-01 93.5% 98.4%
2kdvA00 3.90.79.10 Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › Nucleoside Triphosphate Pyrophosphohydrolase 0.72 58.0 6.11e-01 92.4% 92.7%
3id9B00 3.90.79.10 Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › Nucleoside Triphosphate Pyrophosphohydrolase 0.72 46.0 5.49e-01 91.8% 92.9%
3qsjA00 3.90.79.10 Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › Nucleoside Triphosphate Pyrophosphohydrolase 0.72 64.0 5.94e-01 92.4% 95.5%
1nqzA00 3.90.79.10 Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › Nucleoside Triphosphate Pyrophosphohydrolase 0.72 59.0 6.14e-01 95.7% 91.2%
2fmlA02 3.90.79.10 Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › Nucleoside Triphosphate Pyrophosphohydrolase 0.72 61.0 6.44e-01 90.2% 98.8%
3bm4A00 3.90.79.10 Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › Nucleoside Triphosphate Pyrophosphohydrolase 0.71 56.0 5.53e-01 89.1% 76.6%
3e57A00 3.90.79.10 Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › Nucleoside Triphosphate Pyrophosphohydrolase 0.71 60.0 6.16e-01 96.7% 90.0%
1ryaA00 3.90.79.10 Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › Nucleoside Triphosphate Pyrophosphohydrolase 0.68 52.0 5.58e-01 92.4% 90.6%
3f6aA00 3.90.79.10 Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › Nucleoside Triphosphate Pyrophosphohydrolase 0.67 53.0 5.81e-01 91.3% 98.7%
2a8pA00 3.90.79.10 Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › Nucleoside Triphosphate Pyrophosphohydrolase 0.67 61.0 6.07e-01 97.8% 92.2%
3fcmA00 3.90.79.10 Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › Nucleoside Triphosphate Pyrophosphohydrolase 0.61 54.0 5.51e-01 96.7% 96.7%
5r4qA01 3.90.79.10 Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › Nucleoside Triphosphate Pyrophosphohydrolase 0.61 55.0 5.48e-01 96.2% 99.0%
ECOD (62)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
365187 221.4.1.1 a+b two layers › beta-Grasp › Nudix › Nudix › NUDIX 0.80 58.0 6.34e-01 91.3% 89.0%
5041586 221.4.1.1 a+b two layers › beta-Grasp › Nudix › Nudix › NUDIX 0.77 57.0 6.54e-01 92.4% 99.3%
3886741 221.4.1.9 a+b two layers › beta-Grasp › Nudix › Nudix › NUDIX_4 0.77 58.0 6.45e-01 92.4% 95.3%
4011356 221.4.1.0 a+b two layers › beta-Grasp › Nudix › Nudix 0.77 60.0 6.47e-01 89.7% 93.1%
3655806 221.4.1.1 a+b two layers › beta-Grasp › Nudix › Nudix › NUDIX 0.77 55.0 6.22e-01 91.8% 93.8%
3623075 221.4.1.1 a+b two layers › beta-Grasp › Nudix › Nudix › NUDIX 0.77 57.0 5.84e-01 92.4% 79.4%
4027125 221.4.1.1 a+b two layers › beta-Grasp › Nudix › Nudix › NUDIX 0.77 61.0 6.47e-01 92.4% 92.1%
4926970 221.4.1.1 a+b two layers › beta-Grasp › Nudix › Nudix › NUDIX 0.77 56.0 6.26e-01 91.3% 94.4%
3191529 221.4.1.1 a+b two layers › beta-Grasp › Nudix › Nudix › NUDIX 0.76 61.0 6.52e-01 92.4% 95.0%
3972429 221.4.1.1 a+b two layers › beta-Grasp › Nudix › Nudix › NUDIX 0.76 58.0 6.42e-01 92.4% 96.7%
5029983 221.4.1.0 a+b two layers › beta-Grasp › Nudix › Nudix 0.75 70.0 6.83e-01 96.7% 91.5%
5057871 221.4.1.1 a+b two layers › beta-Grasp › Nudix › Nudix › NUDIX 0.74 69.0 6.71e-01 96.7% 91.5%
3692759 221.4.1.1 a+b two layers › beta-Grasp › Nudix › Nudix › NUDIX 0.74 66.0 5.52e-01 95.1% 72.6%
3599799 221.4.1.21 a+b two layers › beta-Grasp › Nudix › Nudix › PF30669 0.73 64.0 6.10e-01 92.4% 97.7%
4441844 221.4.1.0 a+b two layers › beta-Grasp › Nudix › Nudix 0.73 66.0 6.45e-01 94.6% 90.5%
3613249 221.4.1.0 a+b two layers › beta-Grasp › Nudix › Nudix 0.73 64.0 5.45e-01 92.4% 81.6%
3902239 221.4.1.1 a+b two layers › beta-Grasp › Nudix › Nudix › NUDIX 0.73 55.0 5.66e-01 92.4% 81.1%
4031114 221.4.1.1 a+b two layers › beta-Grasp › Nudix › Nudix › NUDIX 0.73 66.0 6.44e-01 93.5% 90.3%
5048750 221.4.1.1 a+b two layers › beta-Grasp › Nudix › Nudix › NUDIX 0.72 66.0 6.21e-01 95.7% 87.9%
3303285 221.4.1.24 a+b two layers › beta-Grasp › Nudix › Nudix › NUDIX, DUF4743 0.72 68.0 5.48e-01 97.8% 85.1%
3282294 221.4.1.0 a+b two layers › beta-Grasp › Nudix › Nudix 0.72 65.0 5.23e-01 94.6% 81.5%
5048622 221.4.1.1 a+b two layers › beta-Grasp › Nudix › Nudix › NUDIX 0.71 65.0 6.45e-01 94.6% 92.6%
3818481 221.4.1.1 a+b two layers › beta-Grasp › Nudix › Nudix › NUDIX 0.71 64.0 5.95e-01 95.1% 93.4%
3895419 221.4.1.24 a+b two layers › beta-Grasp › Nudix › Nudix › NUDIX, DUF4743 0.71 67.0 5.60e-01 97.8% 91.7%
4929722 221.4.1.1 a+b two layers › beta-Grasp › Nudix › Nudix › NUDIX 0.71 64.0 6.44e-01 94.6% 95.7%
3563172 221.4.1.1 a+b two layers › beta-Grasp › Nudix › Nudix › NUDIX 0.71 55.0 6.10e-01 89.1% 98.7%
3722180 221.4.1.1 a+b two layers › beta-Grasp › Nudix › Nudix › NUDIX 0.71 61.0 6.23e-01 90.8% 93.1%
3281278 221.4.1.0 a+b two layers › beta-Grasp › Nudix › Nudix 0.71 64.0 5.28e-01 94.6% 100.0%
3390675 221.4.1.24 a+b two layers › beta-Grasp › Nudix › Nudix › NUDIX, DUF4743 0.71 67.0 5.54e-01 97.8% 90.5%
162532 221.4.1.1 a+b two layers › beta-Grasp › Nudix › Nudix › NUDIX 0.71 56.0 5.40e-01 89.1% 73.3%
2987839 221.4.1.1 a+b two layers › beta-Grasp › Nudix › Nudix › NUDIX 0.71 51.0 5.78e-01 89.1% 96.4%
3963568 221.4.1.1 a+b two layers › beta-Grasp › Nudix › Nudix › NUDIX 0.71 66.0 5.66e-01 97.8% 90.9%
168843 221.4.1.10 a+b two layers › beta-Grasp › Nudix › Nudix › DUF4743 0.70 66.0 5.59e-01 97.8% 91.5%
3815358 221.4.1.0 a+b two layers › beta-Grasp › Nudix › Nudix 0.70 67.0 5.54e-01 100.0% 96.7%
3782124 221.4.1.1 a+b two layers › beta-Grasp › Nudix › Nudix › NUDIX 0.70 64.0 5.42e-01 97.3% 74.2%
3240161 221.4.1.1 a+b two layers › beta-Grasp › Nudix › Nudix › NUDIX 0.70 65.0 6.07e-01 97.3% 90.9%
3722325 221.4.1.1 a+b two layers › beta-Grasp › Nudix › Nudix › NUDIX 0.69 58.0 6.02e-01 92.4% 92.6%
3200127 221.4.1.1 a+b two layers › beta-Grasp › Nudix › Nudix › NUDIX 0.69 63.0 5.45e-01 95.7% 80.0%
3421793 221.4.1.1 a+b two layers › beta-Grasp › Nudix › Nudix › NUDIX 0.69 57.0 5.86e-01 92.4% 89.7%
3176458 221.4.1.1 a+b two layers › beta-Grasp › Nudix › Nudix › NUDIX 0.68 57.0 5.83e-01 91.8% 91.4%
3334359 221.4.1.1 a+b two layers › beta-Grasp › Nudix › Nudix › NUDIX 0.68 60.0 6.11e-01 96.2% 94.4%
3839072 221.4.1.0 a+b two layers › beta-Grasp › Nudix › Nudix 0.68 57.0 5.41e-01 89.7% 76.2%
3278000 221.4.1.1 a+b two layers › beta-Grasp › Nudix › Nudix › NUDIX 0.68 61.0 5.71e-01 95.1% 88.6%
3288973 221.4.1.1 a+b two layers › beta-Grasp › Nudix › Nudix › NUDIX 0.67 59.0 5.60e-01 92.4% 93.0%
3194169 221.4.1.9 a+b two layers › beta-Grasp › Nudix › Nudix › NUDIX_4 0.67 57.0 5.90e-01 88.0% 99.4%
4867507 221.4.1.18 a+b two layers › beta-Grasp › Nudix › Nudix › NUDT9_N 0.66 58.0 5.01e-01 92.4% 73.5%
4029242 221.4.1.0 a+b two layers › beta-Grasp › Nudix › Nudix 0.66 57.0 5.13e-01 90.8% 95.9%
3503169 221.4.1.18 a+b two layers › beta-Grasp › Nudix › Nudix › NUDT9_N 0.65 45.0 4.19e-01 70.7% 72.2%
3221723 221.4.1.23 a+b two layers › beta-Grasp › Nudix › Nudix › NUDIX, PF25969 0.62 58.0 5.13e-01 99.5% 98.5%
5041122 221.4.1.1 a+b two layers › beta-Grasp › Nudix › Nudix › NUDIX 0.61 56.0 5.68e-01 96.7% 97.3%
3516342 221.4.1.18 a+b two layers › beta-Grasp › Nudix › Nudix › NUDT9_N 0.61 51.0 4.51e-01 88.0% 73.8%
3239293 221.4.1.18 a+b two layers › beta-Grasp › Nudix › Nudix › NUDT9_N 0.60 53.0 4.69e-01 92.9% 71.3%
4549677 221.4.1.1 a+b two layers › beta-Grasp › Nudix › Nudix › NUDIX 0.59 47.0 5.09e-01 92.9% 95.6%
3792841 221.4.1.0 a+b two layers › beta-Grasp › Nudix › Nudix 0.59 52.0 4.57e-01 92.9% 66.5%
3629357 221.4.1.18 a+b two layers › beta-Grasp › Nudix › Nudix › NUDT9_N 0.59 52.0 4.63e-01 94.0% 69.4%
3911909 221.4.1.0 a+b two layers › beta-Grasp › Nudix › Nudix 0.57 53.0 5.02e-01 99.5% 99.1%
3517105 221.4.1.0 a+b two layers › beta-Grasp › Nudix › Nudix 0.57 47.0 4.10e-01 90.2% 58.5%
3503682 221.4.1.18 a+b two layers › beta-Grasp › Nudix › Nudix › NUDT9_N 0.56 47.0 4.24e-01 88.0% 97.6%
3730850 221.4.1.0 a+b two layers › beta-Grasp › Nudix › Nudix 0.55 48.0 4.96e-01 91.8% 96.6%
3519224 221.4.1.0 a+b two layers › beta-Grasp › Nudix › Nudix 0.55 39.0 4.01e-01 72.3% 91.1%
3509103 221.4.1.18 a+b two layers › beta-Grasp › Nudix › Nudix › NUDT9_N 0.52 44.0 3.95e-01 89.1% 70.0%
3511490 221.4.1.0 a+b two layers › beta-Grasp › Nudix › Nudix 0.51 42.0 3.75e-01 92.4% 61.2%
D2 medium residues 21-35_50-71_118-146
PDB
Domain cluster: representative
ECOD (3)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3962501 7527.1.1.2 a/b three-layered sandwiches › SurE-like/CoA-transferase family III (CaiB/BaiF) › SurE-like/CoA-transferase family III (CaiB/BaiF) › SurE-like/CoA-transferase family III (CaiB/BaiF) › CoA_transf_3 0.52 43.0 2.68e-01 93.9% 84.9%
3904818 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.50 40.0 4.08e-01 98.5% 92.3%
3613321 304.48.1.0 a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like 0.50 40.0 2.47e-01 93.9% 27.9%