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NC_007808.1__YP_001294647.1__PP11_gp054__00054
Bact-VirNC_007808.1__YP_001294647.1__PP11_gp054__00054
Identity
- Accession:
- NC_007808 ↗
- Kingdom:
- phage
Quality
83.9
mean pLDDT
Taxonomy
TaxID: 347327
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 12-72
Domain cluster:
representative
CATH (14)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2vxgA01 | 6.10.140.270 | Special › Helix non-globular › Helix Hairpins › | 0.75 | 46.0 | 5.18e-01 | 83.6% | 82.6% |
| 1rqgA04 | 1.10.730.10 | Mainly Alpha › Orthogonal Bundle › Isoleucyl-tRNA Synthetase; Domain 1 › Isoleucyl-tRNA Synthetase; Domain 1 | 0.74 | 43.0 | 3.16e-01 | 90.2% | 23.2% |
| 6k93A00 | 3.90.176.10 | Alpha Beta › Alpha-Beta Complex › Toxin ADP-ribosyltransferase; Chain A, domain 1 › Toxin ADP-ribosyltransferase; Chain A, domain 1 | 0.67 | 49.0 | 3.31e-01 | 78.7% | 72.0% |
| 1iqpA03 | 1.20.272.10 | Mainly Alpha › Up-down Bundle › Zinc Finger, Delta Prime; domain 3 › | 0.67 | 53.0 | 4.53e-01 | 85.2% | 91.5% |
| 1tjcA00 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.65 | 45.0 | 3.97e-01 | 73.8% | 84.2% |
| 1j5wA02 | 1.20.58.180 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Class II aaRS and biotin synthetases; domain 2 | 0.61 | 46.0 | 4.25e-01 | 80.3% | 75.3% |
| 1wcrA00 | 1.20.58.80 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphotransferase system, lactose/cellobiose-type IIA subunit | 0.59 | 48.0 | 3.98e-01 | 86.9% | 75.7% |
| 3zc0D00 | 1.20.58.2140 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.59 | 49.0 | 3.46e-01 | 91.8% | 49.7% |
| 2kj8A00 | 1.10.150.130 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Tyrosine recombinase, N-terminal domain | 0.57 | 45.0 | 3.65e-01 | 86.9% | 58.5% |
| 2d5bA03 | 1.10.730.10 | Mainly Alpha › Orthogonal Bundle › Isoleucyl-tRNA Synthetase; Domain 1 › Isoleucyl-tRNA Synthetase; Domain 1 | 0.55 | 45.0 | 3.30e-01 | 90.2% | 55.5% |
| 1w8iA00 | 3.40.50.1010 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 5'-nuclease | 0.55 | 44.0 | 3.37e-01 | 91.8% | 81.8% |
| 2mjmA00 | 1.10.533.20 | Mainly Alpha › Orthogonal Bundle › Death Domain, Fas › | 0.55 | 39.0 | 3.43e-01 | 78.7% | 74.3% |
| 3bg1B03 | 1.25.40.690 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › | 0.54 | 46.0 | 4.00e-01 | 93.4% | 77.2% |
| 1ax4A02 | 3.40.640.10 | Alpha Beta › 3-Layer(aba) Sandwich › Aspartate Aminotransferase; domain 2 › Type I PLP-dependent aspartate aminotransferase-like (Major domain) | 0.51 | 43.0 | 2.83e-01 | 95.1% | 100.0% |
ECOD (8)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3739663 | 109.4.1.72 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Vps16_C | 0.73 | 48.0 | 3.64e-01 | 91.8% | 30.0% |
| 3517560 | 558.1.1.0 ↗ | alpha duplicates or obligate multimers › Lis-homology dimerization domain › Lis-homology dimerization domain › Lis-homology dimerization domain | 0.72 | 50.0 | 5.11e-01 | 96.7% | 73.3% |
| 3739678 | 5.1.4.74 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Vps16_N | 0.64 | 46.0 | 2.83e-01 | 78.7% | 14.1% |
| 4985440 | 604.10.1.0 ↗ | alpha bundles › Spectrin repeat-like › Enzyme IIa from lactose specific PTS, IIa-lac › Enzyme IIa from lactose specific PTS, IIa-lac | 0.61 | 47.0 | 4.40e-01 | 82.0% | 82.7% |
| 3264315 | 604.12.1.0 ↗ | alpha bundles › Spectrin repeat-like › MIT domain › MIT domain | 0.60 | 53.0 | 4.25e-01 | 96.7% | 88.7% |
| 4985507 | 604.10.1.0 ↗ | alpha bundles › Spectrin repeat-like › Enzyme IIa from lactose specific PTS, IIa-lac › Enzyme IIa from lactose specific PTS, IIa-lac | 0.59 | 47.0 | 4.08e-01 | 85.2% | 76.7% |
| 3586234 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.58 | 52.0 | 3.52e-01 | 98.4% | 84.5% |
| 3988387 | 604.10.1.1 ↗ | alpha bundles › Spectrin repeat-like › Enzyme IIa from lactose specific PTS, IIa-lac › Enzyme IIa from lactose specific PTS, IIa-lac › PTS_IIA | 0.57 | 46.0 | 3.86e-01 | 86.9% | 78.0% |