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NC_007902.1__YP_516220.1__SGPHI_0042__00042

Bact-Vir

NC_007902.1__YP_516220.1__SGPHI_0042__00042

Identity

Accession:
NC_007902 ↗
Kingdom:
phage

Quality

77.5 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 195-309
PDB
CATH (49)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2pm6D01 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.76 62.0 4.63e-01 94.8% 35.7%
8f5pE01 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.76 56.0 3.79e-01 92.2% 22.6%
4g56D00 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.76 59.0 4.24e-01 94.8% 30.7%
3ow8C00 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.76 57.0 4.13e-01 93.9% 30.0%
3mmyA00 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.74 56.0 3.89e-01 93.9% 25.4%
4nsxA02 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.74 58.0 4.16e-01 94.8% 30.7%
4aezA00 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.73 56.0 3.97e-01 94.8% 28.2%
1ijqA01 2.120.10.30 Mainly Beta › 6 Propeller › Neuraminidase › TolB, C-terminal domain 0.73 56.0 4.24e-01 93.9% 36.2%
3jamg01 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.73 55.0 4.00e-01 93.9% 29.7%
1u4cB00 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.71 55.0 3.91e-01 95.7% 28.5%
3vsfC01 2.115.10.20 Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 0.70 61.0 4.33e-01 94.8% 37.7%
1ms9A01 2.120.10.10 Mainly Beta › 6 Propeller › Neuraminidase › 0.70 61.0 4.23e-01 94.8% 39.0%
6fcvB00 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.70 58.0 4.08e-01 93.9% 28.5%
4csdB00 2.120.10.70 Mainly Beta › 6 Propeller › Neuraminidase › Fucose-specific lectin 0.69 53.0 4.05e-01 95.7% 35.2%
2bs6A01 2.40.128.190 Mainly Beta › Beta Barrel › Lipocalin › 0.69 47.0 5.39e-01 74.8% 95.2%
7bwcA01 2.115.10.20 Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 0.69 56.0 4.00e-01 86.1% 32.8%
2xzmR01 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.68 55.0 3.90e-01 93.9% 30.0%
4ci8A01 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.68 56.0 3.97e-01 100.0% 30.9%
5hy7B02 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.67 62.0 4.47e-01 100.0% 47.1%
4i79A00 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.67 55.0 4.02e-01 100.0% 32.3%
7c38B01 2.120.10.70 Mainly Beta › 6 Propeller › Neuraminidase › Fucose-specific lectin 0.67 57.0 4.17e-01 95.7% 34.2%
6x05A01 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.66 58.0 4.01e-01 94.8% 29.7%
3ei3A02 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.66 60.0 4.25e-01 100.0% 33.9%
2b5nB00 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.66 61.0 4.33e-01 100.0% 43.0%
4fwwA01 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.66 59.0 3.93e-01 100.0% 48.4%
2w20B01 2.120.10.10 Mainly Beta › 6 Propeller › Neuraminidase › 0.65 56.0 3.89e-01 95.7% 29.8%
2xe4A02 2.130.10.120 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › Prolyl oligopeptidase, N-terminal domain 0.64 56.0 3.94e-01 94.8% 31.5%
3sreA00 2.120.10.30 Mainly Beta › 6 Propeller › Neuraminidase › TolB, C-terminal domain 0.64 56.0 4.03e-01 95.7% 42.2%
6igbA00 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.64 58.0 4.06e-01 100.0% 43.5%
1r5mA00 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.64 56.0 3.93e-01 94.8% 42.5%
4j0xA00 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.64 55.0 3.85e-01 94.8% 31.2%
2xzhA00 2.130.10.110 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › Clathrin heavy-chain terminal domain 0.63 58.0 4.06e-01 100.0% 32.1%
3ei3B02 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.63 55.0 4.00e-01 94.8% 38.6%
2rkcA00 2.120.10.10 Mainly Beta › 6 Propeller › Neuraminidase › 0.63 53.0 3.71e-01 93.9% 31.8%
3nqhA01 2.115.10.20 Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 0.62 54.0 3.97e-01 94.8% 39.6%
1e8uA00 2.120.10.10 Mainly Beta › 6 Propeller › Neuraminidase › 0.62 57.0 3.79e-01 100.0% 61.0%
4j87A00 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.62 56.0 4.06e-01 99.1% 49.1%
2hesX00 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.62 57.0 4.12e-01 100.0% 45.1%
2jkbA02 2.120.10.10 Mainly Beta › 6 Propeller › Neuraminidase › 0.61 55.0 3.87e-01 100.0% 46.1%
2p4oA01 2.120.10.30 Mainly Beta › 6 Propeller › Neuraminidase › TolB, C-terminal domain 0.61 52.0 3.89e-01 93.9% 39.0%
1s1dA00 2.120.10.100 Mainly Beta › 6 Propeller › Neuraminidase › Apyrase 0.61 53.0 3.83e-01 94.8% 39.1%
3al9A01 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.60 52.0 3.45e-01 93.9% 32.7%
6ctzA01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.56 30.0 3.29e-01 73.9% 62.4%
5j3tA00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.56 39.0 3.84e-01 73.0% 92.9%
1dfvA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.53 39.0 3.35e-01 76.5% 79.2%
1e5pA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.52 35.0 3.21e-01 73.0% 53.0%
1v2bB00 3.40.1000.10 Alpha Beta › 3-Layer(aba) Sandwich › Protein Transport Mog1p; Chain A › Mog1/PsbP, alpha/beta/alpha sandwich 0.52 40.0 3.64e-01 87.0% 60.9%
4u13A00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.51 35.0 3.61e-01 70.4% 95.4%
2jkbA01 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.51 38.0 3.23e-01 79.1% 71.9%
ECOD (88)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
None 0.81 61.0 4.19e-01 95.7% 25.4%
None 0.80 60.0 4.13e-01 95.7% 25.4%
3935890 5.1.4.1 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 0.78 57.0 4.01e-01 94.8% 26.1%
3662235 5.1.4.1 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 0.77 58.0 4.05e-01 89.6% 26.6%
None 0.77 58.0 4.09e-01 95.7% 26.4%
3580666 5.1.4.442 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40, ANAPC4_WD40, KNTC1_N 0.77 56.0 4.19e-01 94.8% 32.6%
3731260 5.1.4.1 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 0.76 58.0 4.05e-01 94.8% 26.4%
3792453 5.1.4.442 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40, ANAPC4_WD40, KNTC1_N 0.76 56.0 4.11e-01 93.9% 30.4%
3259865 5.1.4.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.76 58.0 4.14e-01 94.8% 28.5%
4888953 5.1.5.1 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › WD40 0.76 57.0 3.87e-01 93.9% 23.3%
3739225 5.1.5.1 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › WD40 0.76 58.0 3.97e-01 94.8% 24.5%
3610350 5.1.4.1 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 0.75 54.0 3.88e-01 94.8% 26.5%
3620195 5.1.4.289 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40, eIF2A, ANAPC4_WD40 0.75 56.0 4.04e-01 93.9% 29.3%
3867932 5.1.4.464 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40, ANAPC4_WD40, WD40_MABP1-WDR62_2nd 0.75 59.0 3.90e-01 95.7% 22.1%
3997304 5.1.4.1 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 0.74 57.0 3.95e-01 94.8% 24.9%
4583471 5.1.4.6 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40,ANAPC4_WD40 0.74 55.0 4.05e-01 95.7% 30.8%
3166720 5.1.4.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.74 59.0 3.73e-01 96.5% 18.5%
4002773 5.1.5.1 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › WD40 0.73 60.0 4.04e-01 95.7% 24.5%
3834385 5.1.4.1 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 0.73 58.0 4.09e-01 94.8% 28.5%
5070134 5.1.4.43 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › FG-GAP_3 0.72 62.0 4.25e-01 94.8% 28.0%
3578843 5.1.5.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed 0.72 56.0 4.18e-01 94.8% 33.3%
3739945 5.1.4.164 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Beta-prop_VPS8 0.72 64.0 4.37e-01 94.8% 30.7%
3593071 5.1.4.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.72 56.0 3.80e-01 98.3% 23.5%
4861416 5.1.1.2 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 4-bladed › WD40 0.71 64.0 4.43e-01 100.0% 31.0%
3784210 5.1.4.1 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 0.71 57.0 3.94e-01 89.6% 26.8%
5034173 5.1.4.43 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › FG-GAP_3 0.70 61.0 4.28e-01 95.7% 30.8%
2336349 5.1.3.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed 0.70 47.0 5.24e-01 73.0% 87.6%
3526472 5.1.5.104 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › WD40, ANAPC4_WD40, WD40_MABP1-WDR62_2nd 0.70 59.0 3.98e-01 100.0% 25.7%
3537640 5.1.4.1 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 0.70 63.0 4.31e-01 100.0% 29.9%
3652988 5.1.4.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.70 62.0 4.33e-01 95.7% 33.7%
4223255 5.1.4.169 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Beta-prop_RSE1_2nd 0.69 64.0 4.51e-01 100.0% 45.7%
3738172 5.1.4.172 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Beta-prop_CAF1B_HIR1 0.69 55.0 3.65e-01 93.0% 21.3%
3784138 5.1.5.1 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › WD40 0.69 57.0 4.13e-01 93.9% 32.4%
3274015 5.1.4.6 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40,ANAPC4_WD40 0.69 62.0 4.24e-01 100.0% 29.0%
3770073 5.1.5.1 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › WD40 0.69 60.0 4.15e-01 94.8% 42.8%
3645846 5.1.4.383 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › VPS11_N 0.69 60.0 4.27e-01 95.7% 34.5%
3440727 5.1.4.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.69 60.0 3.61e-01 95.7% 14.6%
4030047 5.1.4.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.69 60.0 4.19e-01 94.8% 31.4%
3371576 5.1.4.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.68 63.0 4.17e-01 100.0% 26.5%
3523657 5.1.4.18 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › EPTP 0.68 60.0 4.11e-01 95.7% 34.5%
3637283 5.1.4.441 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Clathrin-link 0.68 56.0 3.86e-01 95.7% 27.0%
3393981 5.1.4.1 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 0.68 63.0 4.31e-01 100.0% 35.0%
3063046 5.1.4.1 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 0.68 60.0 4.39e-01 100.0% 37.3%
None 0.68 56.0 3.98e-01 100.0% 29.4%
3741661 5.1.4.1 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 0.68 62.0 4.30e-01 100.0% 33.0%
3208422 5.1.4.1 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 0.68 60.0 3.92e-01 94.8% 29.2%
3727239 5.1.4.169 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Beta-prop_RSE1_2nd 0.68 63.0 4.44e-01 100.0% 44.9%
3172580 5.1.4.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.68 57.0 3.94e-01 93.9% 26.8%
3781730 5.1.11.3 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 9-bladed › Utp8_b_propeller 0.67 57.0 3.93e-01 94.8% 28.1%
3514491 5.1.4.242 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › PEP5_VPS11_N 0.67 59.0 4.04e-01 100.0% 27.9%
5006845 295.1.1.27 a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain › PF25991 0.67 33.0 4.59e-01 71.3% 98.2%
3910825 5.1.3.6 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › Kelch_1 0.67 54.0 3.94e-01 95.7% 31.7%
3381414 5.1.2.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 5-bladed 0.67 58.0 5.24e-01 93.9% 78.1%
4014300 5.1.4.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.66 61.0 3.98e-01 100.0% 24.8%
3477547 5.1.4.1 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 0.66 61.0 4.20e-01 100.0% 40.9%
4889001 5.1.4.280 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › ANAPC4_WD40, Beta-prop_WDR36-Utp21_1st 0.66 59.0 4.13e-01 96.5% 32.8%
4888761 5.1.4.1 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 0.66 58.0 4.85e-01 94.8% 63.2%
3782550 5.1.7.2 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 10-bladed › Sortilin-Vps10 0.66 57.0 3.42e-01 94.8% 21.7%
4890945 5.1.4.267 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40, PF28639 0.66 57.0 3.75e-01 93.9% 24.1%
5047051 5.1.4.663 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › SBBP 0.66 58.0 4.06e-01 97.4% 30.0%
3671367 5.1.4.11 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Clathrin_propel 0.66 60.0 4.22e-01 100.0% 37.5%
3644862 109.4.1.0 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.66 60.0 4.16e-01 100.0% 35.5%
4912784 5.1.4.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.65 57.0 4.29e-01 94.8% 39.9%
3999197 5.1.4.164 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Beta-prop_VPS8 0.65 60.0 4.15e-01 100.0% 41.9%
3609794 5.1.4.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.65 60.0 4.13e-01 100.0% 43.3%
3448363 5.1.3.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed 0.65 55.0 4.39e-01 100.0% 46.1%
3932732 5.1.4.277 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40, Beta-prop_EIPR1 0.65 57.0 4.02e-01 100.0% 31.1%
3607171 5.1.4.277 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40, Beta-prop_EIPR1 0.65 57.0 4.04e-01 95.7% 45.2%
3200223 5.1.4.31 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Lgl_C 0.65 57.0 3.35e-01 95.7% 69.9%
3691378 5.1.4.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.65 57.0 3.90e-01 95.7% 29.4%
3615236 5.1.4.1 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 0.64 55.0 3.76e-01 94.8% 33.6%
3593349 5.1.3.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed 0.64 56.0 4.21e-01 100.0% 38.5%
3698121 5.1.4.52 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Sortilin-Vps10 0.64 53.0 3.09e-01 91.3% 12.9%
3227422 5.1.4.313 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Beta-prop_BBS7 0.63 58.0 4.12e-01 100.0% 37.6%
3994733 5.1.3.209 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › Beta-prop_BBS7 0.62 56.0 4.05e-01 100.0% 37.0%
3882656 5.1.4.1 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 0.62 54.0 3.81e-01 95.7% 36.1%
3810743 5.1.3.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed 0.62 56.0 4.39e-01 100.0% 65.3%
3537300 5.1.4.313 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Beta-prop_BBS7 0.62 56.0 4.04e-01 100.0% 38.2%
3615785 5.1.4.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.61 56.0 3.38e-01 100.0% 26.5%
3301602 5.1.2.41 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 5-bladed › WD40_RFWD3 0.61 53.0 4.55e-01 94.8% 62.8%
3285008 5.1.4.15 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › RPE65 0.60 52.0 3.52e-01 94.8% 29.7%
3601982 5.1.4.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.60 51.0 3.61e-01 94.8% 36.6%
3617734 5.1.4.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.60 54.0 3.97e-01 100.0% 47.1%
3480575 5.1.4.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.60 53.0 3.44e-01 100.0% 49.9%
3591236 5.1.4.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.59 53.0 3.32e-01 100.0% 33.3%
4598563 5.1.7.2 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 10-bladed › Sortilin-Vps10 0.59 53.0 3.46e-01 100.0% 34.0%
4888728 5.1.2.14 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 5-bladed › Phage_RBD_prop 0.58 51.0 3.83e-01 95.7% 45.5%
3455400 5.1.3.142 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › Beta-prop_AT5G49610-like 0.57 49.0 3.61e-01 94.8% 38.4%
D2 medium residues 121-174
PDB
Domain cluster: representative
CATH (19)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4ar9A02 1.10.390.20 Mainly Alpha › Orthogonal Bundle › Neutral Protease; domain 2 › 0.64 53.0 4.02e-01 96.3% 52.1%
3phuA01 3.90.70.80 Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › 0.61 51.0 3.79e-01 100.0% 47.2%
1lp1A00 1.20.5.420 Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › Immunoglobulin FC, subunit C 0.60 43.0 4.36e-01 75.9% 78.2%
5z62E00 1.25.40.40 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Cytochrome c oxidase, subunit Va/VI 0.60 41.0 3.36e-01 74.1% 37.6%
4ms4B01 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.59 48.0 3.29e-01 98.1% 56.6%
2vxdA00 1.10.10.2100 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Nucleophosmin, C-terminal domain 0.59 39.0 3.92e-01 70.4% 68.5%
3bg2A01 1.10.3210.10 Mainly Alpha › Orthogonal Bundle › Hypothetical protein af1432 › Hypothetical protein af1432 0.58 43.0 3.02e-01 81.5% 64.6%
3psfA05 1.10.10.2740 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Spt6, Death-like domain 0.58 49.0 4.14e-01 100.0% 57.0%
1zx3A01 1.10.287.1020 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › NE0241-like 0.57 38.0 3.25e-01 98.1% 43.5%
2lrdA00 1.10.10.1840 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › 0.55 38.0 3.67e-01 92.6% 63.9%
1oaiA00 1.10.8.10 Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Ubiquitin-associated (UBA) domain 0.55 35.0 3.46e-01 72.2% 59.3%
3r72A00 1.10.238.20 Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › Pheromone/general odorant binding protein domain 0.55 44.0 3.49e-01 92.6% 73.8%
4jocA00 3.40.50.1240 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Phosphoglycerate mutase-like 0.55 44.0 2.80e-01 98.1% 85.4%
2iylD01 1.20.120.140 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › SRP54, nucleotide-binding domain 0.54 38.0 3.68e-01 77.8% 70.8%
1ll1A01 1.20.1370.10 Mainly Alpha › Up-down Bundle › Hemocyanin, N-terminal domain › Hemocyanin, N-terminal domain 0.54 37.0 3.16e-01 74.1% 47.5%
1fcqA00 3.20.20.70 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I 0.54 41.0 2.61e-01 90.7% 15.0%
2dzlA00 1.10.8.10 Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Ubiquitin-associated (UBA) domain 0.53 38.0 3.59e-01 83.3% 63.6%
2jp7A00 1.10.8.10 Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Ubiquitin-associated (UBA) domain 0.52 36.0 3.55e-01 100.0% 68.4%
7vhqU01 3.30.479.30 Alpha Beta › 2-Layer Sandwich › Tetrahydropterin Synthase; Chain A › Band 7 domain 0.52 40.0 3.28e-01 88.9% 75.5%
ECOD (16)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4167193 101.35.1.1 alpha arrays › HTH › DNA repair regulatory protein RecX › DNA repair regulatory protein RecX › RecX_HTH2 0.64 33.0 3.67e-01 87.0% 62.2%
4020971 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.63 45.0 2.96e-01 77.8% 69.4%
3673509 4048.1.1.1 alpha bundles › Second alpha-helical domain in heme-dependent catalases › Second alpha-helical domain in heme-dependent catalases › Second alpha-helical domain in heme-dependent catalases › Catalase-rel 0.62 44.0 4.18e-01 75.9% 64.6%
4081821 103.1.1.0 alpha arrays › RuvA-C › RuvA-C, UBA, CRAL/TRIO-N, HBS1 › UBA-like domain 0.62 42.0 4.12e-01 72.2% 66.7%
3737617 103.1.1.0 alpha arrays › RuvA-C › RuvA-C, UBA, CRAL/TRIO-N, HBS1 › UBA-like domain 0.61 45.0 4.35e-01 100.0% 71.7%
4051059 101.1.1.76 alpha arrays › HTH › HTH › Three-helical HTH › Integrase_H2C2 0.60 38.0 3.79e-01 81.5% 61.8%
3489734 197.1.1.0 alpha bundles › Acyl-CoA binding protein-like › Acyl-CoA binding protein-like › Acyl-CoA binding protein-like 0.59 48.0 4.34e-01 96.3% 100.0%
4028116 101.1.2.82 alpha arrays › HTH › HTH › winged helix domain › TBPIP 0.56 37.0 3.30e-01 81.5% 43.5%
5001590 101.35.1.0 alpha arrays › HTH › DNA repair regulatory protein RecX › DNA repair regulatory protein RecX 0.56 38.0 3.82e-01 70.4% 70.9%
4065433 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.56 46.0 2.98e-01 96.3% 20.0%
4856249 151.1.1.1 alpha bundles › Hemocyanin-N › Hemocyanin-N › Hemocyanin-N › Hemocyanin_N 0.55 35.0 3.32e-01 72.2% 50.0%
3472935 614.1.1.1 alpha duplicates or obligate multimers › L27 domain › L27 domain › L27 domain › L27 0.55 38.0 3.81e-01 72.2% 74.5%
163972 103.1.1.28 alpha arrays › RuvA-C › RuvA-C, UBA, CRAL/TRIO-N, HBS1 › UBA-like domain › UBA_8 0.53 38.0 3.59e-01 83.3% 63.6%
3968075 2006.1.1.44 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like › Hydrolase, Hydrolase_like 0.53 41.0 2.83e-01 92.6% 29.5%
3368577 103.1.1.0 alpha arrays › RuvA-C › RuvA-C, UBA, CRAL/TRIO-N, HBS1 › UBA-like domain 0.51 35.0 3.41e-01 75.9% 61.5%
5016239 102.2.1.0 alpha arrays › HhH/H2TH › H2TH › H2TH 0.51 42.0 3.43e-01 96.3% 68.2%
D3 medium residues 310-320_418-466_487-507
PDB
CATH (37)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2waoA01 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.67 47.0 4.24e-01 72.8% 73.9%
3hn3D01 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.65 46.0 3.50e-01 74.1% 97.0%
4madA03 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.65 44.0 3.74e-01 70.4% 91.8%
6ec6A01 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.65 45.0 3.53e-01 74.1% 96.2%
5z1bA01 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.64 45.0 3.44e-01 74.1% 98.5%
3thdA03 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.63 43.0 3.68e-01 71.6% 92.7%
4fgmA01 2.60.40.3650 Mainly Beta › Sandwich › Immunoglobulin-like › 0.62 43.0 3.39e-01 71.6% 47.7%
4devD01 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.62 43.0 3.76e-01 72.8% 68.0%
5jipA02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.62 42.0 4.07e-01 70.4% 87.8%
3obaA01 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.61 42.0 3.20e-01 72.8% 58.8%
7sf2D01 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.60 42.0 3.32e-01 74.1% 92.7%
3arxA01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.60 40.0 3.70e-01 70.4% 89.2%
7vqmA01 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.60 41.0 3.26e-01 72.8% 100.0%
6mvfA01 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.59 41.0 3.40e-01 71.6% 69.6%
3fn9A01 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.59 40.0 3.26e-01 71.6% 62.3%
4a3zA00 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.58 40.0 3.41e-01 70.4% 99.3%
1edqA01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.58 39.0 3.63e-01 70.4% 88.8%
3pddA02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.58 39.0 3.71e-01 70.4% 77.2%
5aa7A00 2.70.50.50 Mainly Beta › Distorted Sandwich › Coagulation Factor XIII; Chain A, domain 1 › chitin-binding protein cbp21 0.58 40.0 3.37e-01 72.8% 66.2%
3zo9B03 2.60.40.1180 Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II 0.57 40.0 3.84e-01 72.8% 78.9%
1kiuB01 2.60.40.1090 Mainly Beta › Sandwich › Immunoglobulin-like › Fimbrial-type adhesion domain 0.57 39.0 3.14e-01 70.4% 50.3%
3kq4B04 2.60.120.290 Mainly Beta › Sandwich › Jelly Rolls › Spermadhesin, CUB domain 0.57 39.0 3.59e-01 72.8% 83.8%
4jklA01 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.56 39.0 3.09e-01 72.8% 54.7%
3gm8A01 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.55 39.0 3.21e-01 74.1% 68.8%
3fjsC00 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.55 38.0 3.53e-01 72.8% 83.2%
3kt4A02 3.60.130.20 Alpha Beta › 4-Layer Sandwich › Double-stranded beta-helix › Oxoglutarate/iron-dependent oxygenase, C-terminal degradation domain 0.55 38.0 2.63e-01 74.1% 41.8%
6b9tF01 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.54 37.0 3.28e-01 71.6% 77.6%
1f97A02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.54 37.0 3.43e-01 70.4% 81.0%
3i7dA00 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.54 38.0 3.05e-01 72.8% 54.1%
2bnmA02 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.54 37.0 3.29e-01 71.6% 75.8%
4o9gA00 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.53 37.0 3.18e-01 72.8% 67.4%
1vj2A00 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.53 37.0 3.33e-01 71.6% 89.5%
2xvlA02 2.60.120.380 Mainly Beta › Sandwich › Jelly Rolls › 0.53 37.0 3.09e-01 72.8% 83.0%
2fqpA00 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.53 36.0 3.51e-01 72.8% 85.3%
4hslA01 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.51 36.0 2.89e-01 72.8% 61.4%
3ffjA04 2.60.40.4040 Mainly Beta › Sandwich › Immunoglobulin-like › 0.51 41.0 3.62e-01 90.1% 66.9%
3abgA02 2.60.40.420 Mainly Beta › Sandwich › Immunoglobulin-like › Cupredoxins - blue copper proteins 0.51 35.0 2.93e-01 71.6% 73.9%
ECOD (43)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
5022484 1.1.7.0 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C 0.70 49.0 5.16e-01 72.8% 100.0%
4952405 10.1.2.194 beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) › Lectin_like 0.67 46.0 4.45e-01 72.8% 87.4%
3307787 207.1.1.43 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_3 0.65 46.0 2.80e-01 74.1% 22.9%
1841871 10.32.1.9 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › Glyco_hydro_2_N 0.65 45.0 3.49e-01 72.8% 94.0%
4980591 11.1.5.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f 0.63 44.0 3.68e-01 72.8% 65.0%
4327422 12.1.1.31 beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain › Glyco_hydro_59M 0.62 49.0 4.06e-01 85.2% 70.3%
5067883 11.1.5.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f 0.62 43.0 3.70e-01 72.8% 65.9%
4981541 11.1.5.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f 0.62 43.0 3.65e-01 72.8% 62.9%
3842927 10.32.1.73 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › BetaGal_ABD_1 0.62 42.0 3.55e-01 71.6% 88.3%
3879285 10.4.1.23 beta sandwiches › jelly-roll › Spermadhesin, CUB domain › Spermadhesin, CUB domain › CDCP1_CUB_6 0.62 42.0 3.69e-01 70.4% 79.2%
5067672 12.1.1.0 beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain 0.61 43.0 4.33e-01 72.8% 86.3%
3806757 10.32.1.76 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › BetaGal_gal-bd 0.61 43.0 3.54e-01 74.1% 96.0%
2796403 10.32.1.88 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › Glyco_hydro_2_N2 0.60 41.0 3.48e-01 70.4% 100.0%
4945557 4081.1.1.0 beta sandwiches › Baculovirus p35 protein-related › Baculovirus p35 protein-related › Baculovirus p35 protein-related 0.60 41.0 3.30e-01 71.6% 40.6%
5036963 10.1.2.0 beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) 0.60 41.0 3.70e-01 70.4% 69.6%
3215715 10.12.1.5 beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › PMI_typeI_C 0.60 42.0 3.78e-01 71.6% 75.5%
4616725 10.4.1.1 beta sandwiches › jelly-roll › Spermadhesin, CUB domain › Spermadhesin, CUB domain › CUB 0.59 40.0 3.61e-01 70.4% 60.9%
3940463 10.32.1.73 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › BetaGal_ABD_1 0.59 47.0 3.97e-01 90.1% 99.3%
2448635 10.32.1.88 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › Glyco_hydro_2_N2 0.58 40.0 3.25e-01 71.6% 58.7%
5016339 210.1.3.4 a+b four layers › Ntn/PP2C › Ntn › Class II glutamine amidotransferases › GATase_6 0.58 46.0 3.36e-01 86.4% 51.3%
2048188 10.32.1.88 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › Glyco_hydro_2_N2 0.57 40.0 3.29e-01 72.8% 64.1%
3769321 10.32.1.73 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › BetaGal_ABD_1 0.57 43.0 3.58e-01 81.5% 97.3%
3794468 10.4.1.1 beta sandwiches › jelly-roll › Spermadhesin, CUB domain › Spermadhesin, CUB domain › CUB 0.57 39.0 3.60e-01 72.8% 82.7%
3901334 10.32.1.73 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › BetaGal_ABD_1 0.57 40.0 3.41e-01 74.1% 67.1%
1682636 10.4.1.1 beta sandwiches › jelly-roll › Spermadhesin, CUB domain › Spermadhesin, CUB domain › CUB 0.57 39.0 3.60e-01 72.8% 84.5%
3731316 10.32.1.0 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like 0.56 38.0 3.55e-01 71.6% 79.1%
4330140 11.1.1.577 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › PFF1_C 0.56 38.0 3.02e-01 71.6% 40.6%
5056666 1.1.7.34 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › GTP_EFTU_D4 0.56 42.0 3.66e-01 81.5% 94.5%
4962891 3127.1.1.1 beta sandwiches › Putative transcription regulator R01717-related › Putative transcription regulator R01717-related › Putative transcription regulator R01717-related › DUF192 0.56 44.0 3.99e-01 87.7% 95.7%
3892773 10.4.1.1 beta sandwiches › jelly-roll › Spermadhesin, CUB domain › Spermadhesin, CUB domain › CUB 0.56 39.0 3.50e-01 72.8% 80.0%
3263574 12.1.1.0 beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain 0.56 39.0 3.82e-01 72.8% 100.0%
3480678 10.4.1.1 beta sandwiches › jelly-roll › Spermadhesin, CUB domain › Spermadhesin, CUB domain › CUB 0.56 39.0 3.01e-01 74.1% 73.5%
4373864 10.32.1.73 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › BetaGal_ABD_1 0.56 43.0 3.60e-01 85.2% 98.0%
3617798 10.32.1.229 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › PF27640 0.56 39.0 3.40e-01 72.8% 64.8%
3576905 11.1.1.1009 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › PF26432 0.55 45.0 2.80e-01 92.6% 32.8%
3911617 10.4.1.1 beta sandwiches › jelly-roll › Spermadhesin, CUB domain › Spermadhesin, CUB domain › CUB 0.55 39.0 3.46e-01 72.8% 80.9%
4512235 1.1.7.34 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › GTP_EFTU_D4 0.55 42.0 3.57e-01 82.7% 93.3%
4955926 1.1.7.34 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › GTP_EFTU_D4 0.55 41.0 3.57e-01 82.7% 92.6%
4983428 210.1.3.5 a+b four layers › Ntn/PP2C › Ntn › Class II glutamine amidotransferases › GATase_7 0.55 41.0 3.15e-01 81.5% 37.9%
3999221 10.32.1.0 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like 0.54 38.0 3.55e-01 74.1% 79.0%
5035413 1.1.7.34 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › GTP_EFTU_D4 0.53 40.0 3.48e-01 82.7% 98.5%
3598676 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.52 36.0 2.88e-01 74.1% 92.1%
5007680 70.2.1.6 beta barrels › beta-clip › dUTPase-like › dUTPase-like › DUF22 0.51 39.0 3.45e-01 84.0% 85.6%
D4 medium residues 321-417
PDB
Domain cluster: representative
CATH (25)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
6tdyD01 2.40.10.170 Mainly Beta › Beta Barrel › Thrombin, subunit H › 0.80 57.0 6.43e-01 97.9% 96.0%
3vhxF00 2.60.40.4330 Mainly Beta › Sandwich › Immunoglobulin-like › Kinesin-like protein Kif23, Arf6-interacting domain 0.66 38.0 3.80e-01 83.5% 53.9%
2r6hA01 2.40.30.10 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors 0.66 58.0 5.17e-01 100.0% 98.6%
1cqxA02 2.40.30.10 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors 0.66 58.0 5.62e-01 100.0% 94.6%
2m5sA00 2.40.30.240 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › 0.66 59.0 5.48e-01 100.0% 96.0%
4tkoB01 2.40.30.170 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Efflux pump adaptor protein, beta barrel domain 0.65 53.0 5.46e-01 100.0% 93.5%
2gk6A02 2.40.30.230 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › 0.63 50.0 5.33e-01 99.0% 100.0%
2wzpR01 2.30.300.20 Mainly Beta › Roll › Phage tail proteins - horseshoe like beta roll fold › Phage tail base-plate attachment protein, domain D1/D2 0.62 53.0 4.18e-01 92.8% 74.5%
3w1eA03 2.40.10.410 Mainly Beta › Beta Barrel › Thrombin, subunit H › FlgT, C-terminal domain 0.62 51.0 5.28e-01 97.9% 96.6%
2ok7A01 2.40.30.10 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors 0.61 54.0 5.22e-01 100.0% 97.3%
1fuiA03 3.20.14.10 Alpha Beta › Alpha-Beta Barrel › L-fucose Isomerase; Chain A, domain 3 › L-fucose/L-arabinose isomerase, C-terminal 0.60 54.0 3.99e-01 100.0% 75.3%
5c86A02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.60 51.0 5.03e-01 92.8% 92.1%
1wznA02 2.20.25.110 Mainly Beta › Single Sheet › N-terminal domain of TfIIb › S-adenosyl-L-methionine-dependent methyltransferases 0.55 28.0 3.51e-01 83.5% 82.1%
4rt0A00 2.40.10.220 Mainly Beta › Beta Barrel › Thrombin, subunit H › predicted glycosyltransferase like domains 0.55 43.0 4.16e-01 85.6% 75.2%
2wliA02 2.60.40.1400 Mainly Beta › Sandwich › Immunoglobulin-like › G protein-activated inward rectifier potassium channel 1 0.54 46.0 3.92e-01 93.8% 62.1%
1x5xA00 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.53 40.0 3.94e-01 100.0% 74.3%
4p02A03 2.40.10.220 Mainly Beta › Beta Barrel › Thrombin, subunit H › predicted glycosyltransferase like domains 0.53 44.0 4.10e-01 91.8% 77.0%
1x5lA01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.52 37.0 3.81e-01 89.7% 81.8%
7y8sB01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.51 36.0 3.76e-01 92.8% 82.8%
2ee2A01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.51 36.0 3.75e-01 90.7% 82.8%
2dleA01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.51 36.0 3.77e-01 97.9% 84.9%
7u7nA01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.51 37.0 3.75e-01 91.8% 79.4%
1wfoA01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.50 38.0 3.73e-01 100.0% 76.0%
2ijzA02 2.30.250.10 Mainly Beta › Roll › Aminopeptidase i, Domain 2 › Aminopeptidase i, Domain 2 0.50 43.0 4.23e-01 97.9% 99.1%
2ibgA02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.50 39.0 3.86e-01 100.0% 81.4%
ECOD (40)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
5051220 1.1.7.0 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C 0.68 56.0 5.84e-01 99.0% 96.7%
4011994 1.1.7.0 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C 0.68 61.0 5.84e-01 100.0% 94.5%
3728657 1.1.7.0 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C 0.67 57.0 5.90e-01 92.8% 100.0%
4181458 1.1.7.7 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › FAD_binding_6 0.65 57.0 5.55e-01 100.0% 90.9%
4942656 1.1.7.7 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › FAD_binding_6 0.64 58.0 5.74e-01 100.0% 98.0%
3186464 1.1.7.7 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › FAD_binding_6 0.64 56.0 5.09e-01 100.0% 94.1%
5038245 1.1.7.4 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › FAD_binding_1 0.63 55.0 5.26e-01 99.0% 97.4%
4012802 1.1.7.0 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C 0.63 56.0 5.38e-01 100.0% 93.6%
4537757 1.1.7.7 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › FAD_binding_6 0.63 56.0 5.22e-01 100.0% 85.8%
3548451 1.1.7.4 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › FAD_binding_1 0.63 56.0 4.86e-01 100.0% 87.3%
3284021 1.1.7.0 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C 0.62 55.0 5.32e-01 100.0% 94.5%
3267872 1.1.7.0 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C 0.62 52.0 4.79e-01 100.0% 70.0%
2048195 3734.1.1.1 beta barrels › P22 coat protein insertion domain › P22 coat protein insertion domain › P22 coat protein insertion domain › P22_CoatProtein 0.62 56.0 5.13e-01 100.0% 95.3%
3708173 1.1.7.7 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › FAD_binding_6 0.62 54.0 4.81e-01 100.0% 70.3%
3751462 1.1.7.0 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C 0.61 56.0 5.06e-01 100.0% 87.7%
2770405 1.1.7.23 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › FAD_binding_9 0.61 55.0 5.37e-01 100.0% 96.2%
4864011 1.1.7.41 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › UPF1_1B_dom 0.59 51.0 5.05e-01 100.0% 89.5%
3931783 1.1.7.41 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › UPF1_1B_dom 0.59 51.0 5.22e-01 99.0% 98.9%
3324420 11.1.1.122 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › GO-like_E_set 0.59 50.0 4.85e-01 93.8% 95.5%
3264977 11.1.1.843 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › DUF7034 0.56 47.0 4.44e-01 95.9% 81.7%
3220829 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.55 46.0 4.22e-01 93.8% 76.2%
4350617 11.1.1.122 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › GO-like_E_set 0.55 46.0 4.52e-01 93.8% 95.2%
5059338 11.1.1.33 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Arch_flagellin 0.54 45.0 4.11e-01 95.9% 75.0%
5069591 223.1.1.2 a+b three layers › Profilin-like › sensor domains › sensor domains › PAS 0.54 37.0 3.19e-01 70.1% 76.1%
3883257 11.1.1.896 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › fn3, I-set 0.53 39.0 3.09e-01 96.9% 34.5%
4017098 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.53 43.0 4.17e-01 95.9% 80.0%
3185811 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.53 43.0 4.12e-01 95.9% 76.5%
4025617 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.53 44.0 3.85e-01 95.9% 84.4%
3413761 11.1.1.2 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › fn3 0.52 45.0 4.03e-01 100.0% 83.4%
3433672 11.10.1.5 beta sandwiches › Immunoglobulin-like beta-sandwich › TRAF domain-like › TRAF domain-like › MATH_2 0.51 45.0 3.95e-01 100.0% 89.3%
3398518 11.1.1.2 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › fn3 0.51 38.0 3.84e-01 100.0% 82.1%
4969129 223.1.1.0 a+b three layers › Profilin-like › sensor domains › sensor domains 0.51 36.0 3.53e-01 72.2% 87.6%
4986976 223.1.1.25 a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_9 0.51 36.0 3.41e-01 74.2% 78.3%
3273083 11.1.5.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f 0.51 43.0 4.37e-01 97.9% 100.0%
3250384 12.5.1.0 beta sandwiches › Glycosyl hydrolase domain-like › ZU5/Nup98-C/GAIN-B autoproteolytic domain-related › ZU5/Nup98-C/GAIN-B autoproteolytic domain-related 0.51 41.0 3.45e-01 100.0% 49.4%
3231376 11.10.1.6 beta sandwiches › Immunoglobulin-like beta-sandwich › TRAF domain-like › TRAF domain-like › MATH 0.51 44.0 4.03e-01 100.0% 91.5%
3903752 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.51 39.0 3.86e-01 97.9% 79.0%
5048718 223.1.1.13 a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_3 0.51 34.0 2.32e-01 70.1% 26.6%
3971184 223.1.1.14 a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_4 0.50 35.0 3.08e-01 71.1% 65.0%
5063921 223.1.1.2 a+b three layers › Profilin-like › sensor domains › sensor domains › PAS 0.50 34.0 3.32e-01 70.1% 96.4%