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NC_007902.1__YP_516225.1__SGPHI_0047__00047

Bact-Vir

NC_007902.1__YP_516225.1__SGPHI_0047__00047

Identity

Accession:
NC_007902 ↗
Kingdom:
phage

Quality

79.7 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Sodalis_phage_phiSG1

TaxID: 373126

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 47-108
PDB
Domain cluster: representative
CATH (3)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1u9pA00 1.10.1220.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant › Met repressor-like 0.84 61.0 5.17e-01 100.0% 49.0%
1b01A00 1.10.1220.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant › Met repressor-like 0.82 55.0 6.37e-01 96.8% 100.0%
1k8wA01 3.30.2350.10 Alpha Beta › 2-Layer Sandwich › Pseudouridine synthase › Pseudouridine synthase 0.51 39.0 2.68e-01 85.5% 44.4%
ECOD (11)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
5033202 101.1.11.0 ↗ alpha arrays › HTH › HTH › Ribbon-helix-helix 0.87 65.0 5.59e-01 96.8% 53.3%
4980865 101.1.11.0 ↗ alpha arrays › HTH › HTH › Ribbon-helix-helix 0.80 60.0 5.45e-01 88.7% 61.3%
5012232 101.1.11.0 ↗ alpha arrays › HTH › HTH › Ribbon-helix-helix 0.79 55.0 5.82e-01 100.0% 83.6%
5050855 101.1.11.0 ↗ alpha arrays › HTH › HTH › Ribbon-helix-helix 0.78 54.0 5.68e-01 72.6% 98.2%
4946063 101.1.11.0 ↗ alpha arrays › HTH › HTH › Ribbon-helix-helix 0.73 52.0 5.43e-01 98.4% 83.6%
3985544 101.1.11.65 ↗ alpha arrays › HTH › HTH › Ribbon-helix-helix › RepB-RCR_reg 0.73 56.0 5.85e-01 83.9% 100.0%
4946062 101.1.11.0 ↗ alpha arrays › HTH › HTH › Ribbon-helix-helix 0.71 50.0 5.39e-01 100.0% 92.0%
2625223 101.1.11.0 ↗ alpha arrays › HTH › HTH › Ribbon-helix-helix 0.71 50.0 5.27e-01 100.0% 83.6%
5011906 101.1.11.0 ↗ alpha arrays › HTH › HTH › Ribbon-helix-helix 0.70 47.0 4.98e-01 95.2% 80.0%
4887254 5001.1.1.1 ↗ alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › 7tm_1 0.52 35.0 2.48e-01 71.0% 66.4%
3722543 2003.1.3.1 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › Nucleotide-binding domain › DAO 0.50 39.0 2.44e-01 88.7% 65.6%