NC_007917.1__YP_529567.1__CDBPCV119_gp16__00016

Bact-Vir

Identity

84.0 mean pLDDT

Heunggongvirae› Uroviricota› Caudoviricetes› Lubbockvirus› Clostridium_phage_phi_CD119

TaxID: 2883936

View cluster (26 members)

Download PDB Download Scores JSON

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 38-137

PDB

Domain cluster: rep: IMGVR_UViG_3300005298_000040-3300005298-Ga0071330_107091546__D3-94

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF08890.18 best	Phage_TAC_5	90.0	1.70e-25	100.0%	77.4%

CATH (4)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
3kluA01	3.30.2220.30	Alpha Beta › 2-Layer Sandwich › rbstp2171 ›	0.73	67.0	6.47e-01	100.0%	90.0%
5xbfA02	1.20.80.10	Mainly Alpha › Up-down Bundle › Acyl-CoA Binding Protein ›	0.54	33.0	3.33e-01	87.0%	59.6%
4xt1A00	1.20.1070.10	Mainly Alpha › Up-down Bundle › Rhopdopsin 7-helix transmembrane proteins › Rhodopsin 7-helix transmembrane proteins	0.51	35.0	2.61e-01	71.0%	40.5%
2digA00	2.30.30.140	Mainly Beta › Roll › SH3 type barrels. ›	0.51	27.0	3.09e-01	95.0%	70.6%

ECOD (5)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
4957561	6050.1.1.0 ↗	a+b two layers › Phage tail assembly chaperone › Phage tail assembly chaperone › Phage tail assembly chaperone	0.72	63.0	6.18e-01	100.0%	87.6%
3788555	190.1.1.0 ↗	alpha arrays › HMG-box-like › HMG-box › HMG-box	0.55	41.0	3.66e-01	79.0%	61.4%
3995563	375.1.1.89 ↗	few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › zf-LITAF-like	0.54	26.0	3.39e-01	97.0%	88.0%
3593545	206.1.1.1 ↗	a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase	0.52	40.0	3.00e-01	81.0%	65.9%
3285819	101.1.2.92 ↗	alpha arrays › HTH › HTH › winged helix domain › HTH_11	0.50	29.0	2.65e-01	91.0%	43.1%