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NC_008201.1__YP_655498.1__MhaA1p31__00030

Bact-Vir

NC_008201.1__YP_655498.1__MhaA1p31__00030

Identity

Accession:
NC_008201 ↗
Kingdom:
phage

Quality

90.2 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Peduoviridae› Baylorvirus› Mannheimia_phage_PHL101

TaxID: 2681596

Cluster

View cluster (18 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 17-249
PDB
Domain cluster: rep: NC_023703.1__YP_009013597.1__DORI_47__00047__D8-227
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF12686.13 best DUF3800 32.8 1.50e-07 76.4% 88.6%
CATH (5)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3wxmB02 3.30.420.60 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › eRF1 domain 2 0.66 30.0 4.14e-01 72.1% 82.0%
2qxlB01 3.30.420.40 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain 0.60 29.0 3.80e-01 71.2% 79.9%
4ktwA00 3.30.420.10 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H 0.56 35.0 4.14e-01 92.3% 88.7%
4rhaA00 3.30.1330.60 Alpha Beta › 2-Layer Sandwich › 60s Ribosomal Protein L30; Chain: A; › OmpA-like domain 0.51 26.0 3.34e-01 70.0% 82.4%
2k3iA01 3.30.70.860 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.51 18.0 3.09e-01 70.4% 90.6%
ECOD (17)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4342890 2484.1.1.264 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DUF3800 0.87 79.0 7.48e-01 93.6% 96.6%
4969420 2484.1.1.264 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DUF3800 0.82 67.0 7.13e-01 94.8% 94.6%
3286059 2484.1.1.0 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like 0.82 58.0 6.68e-01 95.7% 95.4%
4943926 2484.1.1.0 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like 0.81 75.0 7.26e-01 95.7% 95.7%
3830251 2484.1.1.67 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › RVT_3 0.73 42.0 4.85e-01 92.7% 77.1%
3818469 2484.1.1.67 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › RVT_3 0.70 38.0 5.13e-01 77.7% 97.6%
5032514 2484.1.1.0 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like 0.65 59.0 5.76e-01 96.1% 90.2%
3603179 4143.1.1.1 ↗ a+b two layers › THUMP domain-like › THUMP domain-like › THUMP domain-like › THUMP 0.61 23.0 3.51e-01 70.0% 82.1%
4306325 2484.1.1.40 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › RuvX 0.57 30.0 3.59e-01 81.5% 74.7%
1088701 2484.1.1.54 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DUF3882 0.56 35.0 4.14e-01 92.3% 88.7%
4118739 2484.1.1.40 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › RuvX 0.56 29.0 3.58e-01 91.0% 77.2%
4108976 2484.1.1.40 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › RuvX 0.55 28.0 3.43e-01 72.1% 72.3%
4292358 2484.1.1.25 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › RuvC 0.54 31.0 3.69e-01 73.0% 79.4%
4126066 2484.1.1.40 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › RuvX 0.54 28.0 3.46e-01 89.7% 77.2%
4162179 2484.1.1.25 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › RuvC 0.53 30.0 3.66e-01 85.4% 82.6%
4943545 4143.1.1.11 ↗ a+b two layers › THUMP domain-like › THUMP domain-like › THUMP domain-like › UPF0020 0.52 26.0 3.66e-01 89.7% 99.1%
None — 0.50 37.0 3.88e-01 76.0% 87.9%