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NC_008206.2__YP_655894.1__Wildcat_29__00029

Bact-Vir

NC_008206.2__YP_655894.1__Wildcat_29__00029

Identity

Accession:
NC_008206 ↗
Kingdom:
phage

Quality

70.8 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 93-158
PDB
Domain cluster: representative
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF14265.12 best DUF4355 27.0 6.10e-06 98.5% 45.2%
CATH (3)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3b8bA01 3.30.540.10 Alpha Beta › 2-Layer Sandwich › Fructose-1,6-Bisphosphatase; Chain A, domain 1 › Fructose-1,6-Bisphosphatase, subunit A, domain 1 0.72 50.0 3.71e-01 72.7% 32.1%
1rp3A01 1.10.1740.10 Mainly Alpha › Orthogonal Bundle › Rna Polymerase Sigma Factor; Chain: A › RNA polymerase sigma factor, region 2, helix turn helix motif 0.68 53.0 4.97e-01 87.9% 97.6%
1fdyB00 3.20.20.70 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I 0.60 40.0 2.64e-01 92.4% 15.8%
ECOD (1)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4204515 101.8.1.2 alpha arrays › HTH › An anticodon-binding domain of class I aminoacyl-tRNA synthetases › An anticodon-binding domain of class I aminoacyl-tRNA synthetases › Anticodon_2 0.67 45.0 3.61e-01 71.2% 88.6%