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NC_008562.1__YP_851019.1__MaLMM01_gp005__00005

Bact-Vir

NC_008562.1__YP_851019.1__MaLMM01_gp005__00005

Identity

Accession:
NC_008562 ↗
Kingdom:
phage

Quality

79.3 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 20-69
PDB
Domain cluster: representative
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF04485.18 best NblA 52.9 5.50e-14 98.0% 96.0%
CATH (2)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2kz5A00 1.10.880.10 Mainly Alpha › Orthogonal Bundle › Transcription Factor Skn-1; Chain P › Transcription factor, Skn-1-like, DNA-binding domain 0.59 47.0 3.85e-01 86.0% 69.2%
2vx2G02 1.10.12.10 Mainly Alpha › Orthogonal Bundle › Lyase 2-enoyl-coa Hydratase; Chain A, domain 2 › Lyase 2-enoyl-coa Hydratase, Chain A, domain 2 0.58 44.0 4.32e-01 86.0% 74.5%
ECOD (2)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3705474 109.4.1.0 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.79 65.0 4.03e-01 92.0% 16.9%
4028213 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.68 56.0 4.22e-01 98.0% 65.2%