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NC_009232.2__YP_001110803.2__SPSV3_gp31__00031

Bact-Vir

NC_009232.2__YP_001110803.2__SPSV3_gp31__00031

Identity

Accession:
NC_009232 ↗
Kingdom:
phage

Quality

89.1 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Sarkviridae› Jerseyvirus› Salmonella_phage_SETP3

TaxID: 424944

Cluster

Singleton — not in a non-trivial cluster

3D Structure

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Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 4-67
PDB
Domain cluster: representative
CATH (2)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1vwxM01 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.59 42.0 3.90e-01 100.0% 58.8%
6ahuH01 3.30.70.3250 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Ribonuclease P, Pop5 subunit 0.54 40.0 3.63e-01 84.4% 63.2%
D2 high residues 71-191
PDB
Domain cluster: rep: OR396896.1__WOZ53333.1__X__00027__D1-85
CATH (74)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1nlqE00 2.60.120.340 Mainly Beta › Sandwich › Jelly Rolls › Nucleoplasmin core domain 0.69 48.0 5.21e-01 96.7% 87.8%
1pm4A00 2.60.120.510 Mainly Beta › Sandwich › Jelly Rolls › Mitogen Ypm 0.69 49.0 4.99e-01 96.7% 76.1%
4mgqA01 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.68 50.0 4.73e-01 100.0% 63.1%
1fi2A00 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.67 41.0 3.49e-01 96.7% 36.3%
4l9bA02 2.60.120.1400 Mainly Beta › Sandwich › Jelly Rolls › Viral head domain of polysaccharide receptor-binding protein-like 0.66 58.0 4.91e-01 100.0% 83.6%
2vvdA00 2.60.120.720 Mainly Beta › Sandwich › Jelly Rolls › 0.65 59.0 5.35e-01 100.0% 88.3%
4w6yA00 2.60.120.1210 Mainly Beta › Sandwich › Jelly Rolls › 0.64 55.0 5.21e-01 99.2% 78.8%
1wmdA02 2.60.120.380 Mainly Beta › Sandwich › Jelly Rolls › 0.63 50.0 5.14e-01 96.7% 88.9%
4xuoA00 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.63 51.0 4.69e-01 100.0% 67.3%
8a28A02 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.62 55.0 5.25e-01 95.9% 90.1%
2e26A02 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.62 51.0 4.76e-01 100.0% 70.3%
3km5A00 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.62 56.0 4.88e-01 99.2% 85.5%
2gu9A01 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.62 37.0 3.94e-01 98.3% 68.0%
2xomA00 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.61 56.0 5.28e-01 99.2% 85.5%
3nkgA00 2.60.120.790 Mainly Beta › Sandwich › Jelly Rolls › 0.61 54.0 4.89e-01 99.2% 91.8%
1uyjA02 2.170.15.10 Mainly Beta › Beta Complex › Proaerolysin; Chain A, domain 3 › Proaerolysin, chain A, domain 3 0.61 53.0 4.60e-01 95.9% 73.8%
2qqkA01 2.60.120.290 Mainly Beta › Sandwich › Jelly Rolls › Spermadhesin, CUB domain 0.61 43.0 4.43e-01 100.0% 76.9%
2c9aA01 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.61 55.0 5.00e-01 100.0% 85.8%
4hsaF02 2.60.40.2150 Mainly Beta › Sandwich › Immunoglobulin-like › Interleukin-17 receptor A/B, fibronectin-III-like domain 2 0.61 45.0 4.82e-01 91.7% 90.5%
3qs2A00 2.60.40.3290 Mainly Beta › Sandwich › Immunoglobulin-like › Fimbrial protein EcpA 0.60 47.0 4.25e-01 85.1% 94.8%
2x29A00 2.60.120.40 Mainly Beta › Sandwich › Jelly Rolls › 0.60 54.0 5.02e-01 100.0% 81.4%
5hbaA00 2.60.120.40 Mainly Beta › Sandwich › Jelly Rolls › 0.60 52.0 5.11e-01 100.0% 86.5%
2w5fB01 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.60 54.0 5.03e-01 100.0% 85.5%
1l9nA03 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.60 47.0 4.88e-01 90.1% 89.5%
3m5gA02 3.90.209.20 Alpha Beta › Alpha-Beta Complex › Hemagglutinin (Ha1 Chain); Chain: A; domain 1 › Haemagglutinin, alpha/beta domain, HA1 chain 0.60 44.0 3.73e-01 100.0% 45.2%
4kkpA02 2.60.40.3880 Mainly Beta › Sandwich › Immunoglobulin-like › 0.60 45.0 4.62e-01 90.9% 85.0%
7ui8A01 2.60.40.3930 Mainly Beta › Sandwich › Immunoglobulin-like › 0.60 43.0 4.68e-01 75.2% 95.1%
5yotA03 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.59 48.0 4.94e-01 89.3% 90.6%
1ex0A03 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.59 48.0 4.92e-01 93.4% 92.1%
1sfpA00 2.60.120.290 Mainly Beta › Sandwich › Jelly Rolls › Spermadhesin, CUB domain 0.59 40.0 4.18e-01 98.3% 75.7%
4zchA01 2.60.120.40 Mainly Beta › Sandwich › Jelly Rolls › 0.59 53.0 5.16e-01 98.3% 90.8%
1dg6A00 2.60.120.40 Mainly Beta › Sandwich › Jelly Rolls › 0.59 53.0 4.99e-01 100.0% 88.6%
3cewA01 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.59 36.0 3.75e-01 100.0% 65.5%
2wnvD00 2.60.120.40 Mainly Beta › Sandwich › Jelly Rolls › 0.59 51.0 5.02e-01 100.0% 87.2%
2crmA01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.59 36.0 4.34e-01 76.0% 94.9%
1sppB00 2.60.120.290 Mainly Beta › Sandwich › Jelly Rolls › Spermadhesin, CUB domain 0.58 40.0 4.18e-01 100.0% 76.8%
4qawH03 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.58 52.0 5.09e-01 100.0% 88.8%
7uzsX03 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.58 46.0 4.77e-01 92.6% 90.4%
3jqwC00 2.60.120.380 Mainly Beta › Sandwich › Jelly Rolls › 0.58 48.0 4.81e-01 98.3% 88.4%
1kv3A03 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.58 46.0 4.72e-01 90.1% 88.9%
3o0lA00 2.60.40.3230 Mainly Beta › Sandwich › Immunoglobulin-like › 0.58 44.0 4.66e-01 80.2% 90.8%
1g0dA03 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.58 45.0 4.73e-01 90.9% 90.9%
1cov100 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.58 53.0 4.07e-01 100.0% 58.7%
2re9A01 2.60.120.40 Mainly Beta › Sandwich › Jelly Rolls › 0.58 52.0 4.80e-01 99.2% 88.5%
3kt7A01 2.60.120.620 Mainly Beta › Sandwich › Jelly Rolls › q2cbj1_9rhob like domain 0.58 42.0 3.38e-01 95.9% 37.8%
1xvsA00 2.60.40.1470 Mainly Beta › Sandwich › Immunoglobulin-like › ApaG domain 0.58 45.0 4.49e-01 89.3% 81.3%
2hr0B02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.57 42.0 4.41e-01 90.1% 86.2%
4es8B01 2.60.120.1240 Mainly Beta › Sandwich › Jelly Rolls › 0.57 51.0 4.35e-01 98.3% 88.8%
3zyzA03 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.57 47.0 4.65e-01 90.1% 91.7%
3h7jA01 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.57 33.0 3.44e-01 99.2% 58.8%
1lb6A00 2.60.210.10 Mainly Beta › Sandwich › Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A › Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A 0.57 43.0 3.97e-01 79.3% 98.1%
2je8A04 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.56 42.0 4.49e-01 91.7% 92.2%
8hhvA01 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.56 50.0 4.99e-01 96.7% 98.4%
5tf0B03 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.56 44.0 4.57e-01 90.1% 91.0%
3k4zA01 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.56 49.0 4.48e-01 96.7% 86.4%
6sk6A00 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.56 50.0 3.88e-01 100.0% 57.5%
2qngA01 2.60.60.30 Mainly Beta › Sandwich › Lipoxygenase-1 › sav2460 like domains 0.56 46.0 4.19e-01 90.1% 83.6%
5jp0A03 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.56 44.0 4.42e-01 93.4% 83.1%
4i0nA00 2.70.240.10 Mainly Beta › Distorted Sandwich › Leukocidin-like › Leukocidin/porin MspA 0.56 46.0 3.65e-01 90.9% 84.8%
5z9sA03 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.55 46.0 4.64e-01 90.9% 90.2%
1alyA00 2.60.120.40 Mainly Beta › Sandwich › Jelly Rolls › 0.55 49.0 4.66e-01 100.0% 87.7%
5u8rA03 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.55 45.0 4.77e-01 97.5% 100.0%
1qg3A02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.54 42.0 4.44e-01 98.3% 94.2%
1bev100 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.54 49.0 3.80e-01 100.0% 57.5%
2wmpB00 2.60.40.1090 Mainly Beta › Sandwich › Immunoglobulin-like › Fimbrial-type adhesion domain 0.54 42.0 4.19e-01 82.6% 91.1%
4ypjA02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.54 45.0 4.53e-01 91.7% 90.8%
2f1eA00 2.60.40.1470 Mainly Beta › Sandwich › Immunoglobulin-like › ApaG domain 0.53 43.0 4.36e-01 90.9% 92.2%
4cu7A02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.52 44.0 4.43e-01 93.4% 91.7%
3anzC00 2.70.240.10 Mainly Beta › Distorted Sandwich › Leukocidin-like › Leukocidin/porin MspA 0.52 46.0 3.51e-01 100.0% 78.9%
1kkeA02 2.60.90.20 Mainly Beta › Sandwich › Adenovirus Type 5 Fiber Protein (Receptor Binding Domain) › Virus attachment protein , globular domain 0.52 41.0 3.98e-01 87.6% 82.3%
2wliA02 2.60.40.1400 Mainly Beta › Sandwich › Immunoglobulin-like › G protein-activated inward rectifier potassium channel 1 0.50 42.0 3.90e-01 92.6% 75.8%
1xjaB00 2.60.120.280 Mainly Beta › Sandwich › Jelly Rolls › Regulatory protein AraC 0.50 35.0 3.26e-01 82.6% 55.8%
8b38A01 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.50 44.0 3.65e-01 99.2% 80.1%
5j7mA00 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.50 34.0 3.48e-01 83.5% 69.7%
ECOD (94)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3972098 10.32.1.239 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › FNIII-A_GpJ 0.82 73.0 7.00e-01 99.2% 83.7%
3978761 10.32.1.239 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › FNIII-A_GpJ 0.80 70.0 6.96e-01 100.0% 89.6%
3945527 10.32.1.239 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › FNIII-A_GpJ 0.79 74.0 7.14e-01 100.0% 90.4%
4971701 10.1.2.0 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) 0.73 50.0 5.42e-01 100.0% 85.0%
5048013 10.1.2.0 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) 0.71 49.0 5.37e-01 97.5% 88.4%
5047474 10.1.2.0 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) 0.71 47.0 5.24e-01 96.7% 86.3%
3211451 10.32.1.172 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › DDR1-2_DS-like 0.70 55.0 4.98e-01 96.7% 61.2%
5043304 10.1.2.0 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) 0.69 58.0 5.82e-01 100.0% 90.8%
3889465 10.32.1.0 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like 0.69 52.0 5.37e-01 98.3% 83.5%
4426314 10.32.1.0 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like 0.68 54.0 5.14e-01 97.5% 71.0%
5060440 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.68 50.0 5.20e-01 89.3% 82.7%
5064648 10.1.2.0 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) 0.68 47.0 5.10e-01 100.0% 86.0%
5005735 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.68 46.0 5.20e-01 79.3% 92.2%
5001041 10.1.2.0 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) 0.68 52.0 5.43e-01 96.7% 90.0%
3919527 10.32.1.0 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like 0.67 47.0 4.97e-01 100.0% 81.9%
5038655 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.67 44.0 5.21e-01 70.2% 100.0%
4025604 10.32.1.4 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › EMP24_GP25L 0.67 46.0 4.82e-01 96.7% 77.3%
3914225 10.32.1.283 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › TGFb_propeptide 0.67 61.0 5.91e-01 100.0% 94.8%
3514837 10.32.1.0 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like 0.67 50.0 5.17e-01 100.0% 83.5%
5002193 10.1.2.0 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) 0.67 50.0 5.19e-01 95.9% 86.4%
5083851 10.1.2.0 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) 0.66 51.0 5.22e-01 100.0% 86.0%
5035593 10.1.2.0 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) 0.66 51.0 5.45e-01 96.7% 94.3%
3783891 10.32.1.4 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › EMP24_GP25L 0.66 46.0 4.75e-01 100.0% 76.5%
5039010 10.1.2.0 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) 0.65 49.0 4.87e-01 99.2% 74.6%
3910447 10.32.1.4 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › EMP24_GP25L 0.65 48.0 4.72e-01 100.0% 71.5%
4945026 10.1.2.0 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) 0.65 49.0 5.07e-01 98.3% 86.4%
3837828 10.32.1.192 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › C-JID 0.65 55.0 5.32e-01 98.3% 82.2%
3822377 207.1.1.0 ↗ beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats 0.65 55.0 3.51e-01 97.5% 19.0%
1948618 10.32.1.4 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › EMP24_GP25L 0.65 45.0 4.71e-01 98.3% 79.6%
5050550 10.1.2.0 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) 0.65 55.0 5.57e-01 98.3% 93.3%
4028847 10.32.1.4 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › EMP24_GP25L 0.65 44.0 4.76e-01 96.7% 84.0%
3889464 10.32.1.0 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like 0.65 59.0 5.51e-01 100.0% 86.7%
4928383 10.1.2.0 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) 0.64 41.0 4.63e-01 96.7% 85.6%
3886059 10.32.1.3 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › Calpain_III 0.64 52.0 4.78e-01 97.5% 66.3%
4615128 10.32.1.0 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like 0.64 58.0 5.40e-01 98.3% 86.7%
3882832 10.32.1.0 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like 0.64 56.0 5.47e-01 100.0% 88.5%
5038684 10.1.2.0 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) 0.64 44.0 4.62e-01 98.3% 78.2%
3825274 10.32.1.4 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › EMP24_GP25L 0.63 47.0 4.30e-01 100.0% 57.0%
3529423 10.32.1.0 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like 0.63 56.0 5.49e-01 100.0% 90.0%
3708492 10.32.1.0 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like 0.63 44.0 4.64e-01 95.9% 82.9%
4148939 10.32.1.0 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like 0.63 41.0 4.65e-01 98.3% 90.0%
4063161 10.32.1.0 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like 0.63 40.0 4.38e-01 96.7% 81.1%
3563711 10.32.1.4 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › EMP24_GP25L 0.62 45.0 3.99e-01 100.0% 49.7%
3519565 10.32.1.0 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like 0.61 42.0 4.54e-01 99.2% 81.9%
5014960 10.1.2.0 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) 0.61 55.0 4.90e-01 100.0% 80.0%
3580968 10.40.1.1 ↗ beta sandwiches › jelly-roll › PHR domain › PHR domain › PHR 0.61 54.0 4.92e-01 98.3% 90.3%
3897855 10.3.1.1 ↗ beta sandwiches › jelly-roll › TNF-like › TNF-like › TNF 0.61 56.0 4.91e-01 99.2% 81.6%
1228433 11.1.1.17 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Transglut_C 0.60 48.0 4.93e-01 90.9% 90.3%
3622545 10.40.1.1 ↗ beta sandwiches › jelly-roll › PHR domain › PHR domain › PHR 0.60 51.0 4.69e-01 100.0% 70.6%
138644 10.3.1.1 ↗ beta sandwiches › jelly-roll › TNF-like › TNF-like › TNF 0.60 54.0 5.02e-01 100.0% 81.4%
3099995 11.1.1.17 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Transglut_C 0.60 47.0 4.79e-01 90.1% 84.3%
4411709 11.1.1.17 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Transglut_C 0.60 49.0 5.01e-01 93.4% 92.2%
5064146 10.1.2.0 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) 0.59 52.0 4.70e-01 95.9% 100.0%
3895339 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.59 46.0 4.76e-01 90.1% 87.8%
3897413 11.1.1.17 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Transglut_C 0.59 47.0 4.79e-01 90.1% 88.7%
5081704 10.1.2.0 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) 0.59 49.0 3.99e-01 100.0% 47.4%
4019026 10.12.1.29 ↗ beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › CDO_I 0.59 39.0 3.15e-01 99.2% 34.3%
3905727 11.1.1.17 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Transglut_C 0.59 48.0 4.69e-01 91.7% 80.8%
2523954 10.3.1.1 ↗ beta sandwiches › jelly-roll › TNF-like › TNF-like › TNF 0.59 54.0 4.93e-01 100.0% 82.2%
5010985 10.1.1.117 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Thermopsin 0.59 54.0 4.05e-01 100.0% 80.3%
3522414 11.1.1.17 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Transglut_C 0.59 46.0 4.60e-01 89.3% 80.8%
3903731 11.1.1.17 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Transglut_C 0.59 46.0 4.69e-01 90.1% 87.0%
4517189 10.3.1.1 ↗ beta sandwiches › jelly-roll › TNF-like › TNF-like › TNF 0.59 52.0 4.75e-01 96.7% 80.0%
3573045 11.1.1.17 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Transglut_C 0.59 46.0 4.63e-01 90.1% 81.6%
3530114 11.1.1.17 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Transglut_C 0.59 47.0 4.82e-01 91.7% 90.4%
5070101 10.1.2.0 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) 0.59 48.0 4.89e-01 99.2% 89.2%
4238325 11.1.1.17 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Transglut_C 0.59 48.0 4.90e-01 92.6% 92.2%
3758040 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.58 47.0 4.78e-01 89.3% 88.3%
140125 11.1.1.93 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › DUF1425 0.58 44.0 4.66e-01 80.2% 90.8%
3584645 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.58 46.0 4.71e-01 90.1% 88.7%
3893718 10.3.1.1 ↗ beta sandwiches › jelly-roll › TNF-like › TNF-like › TNF 0.58 53.0 4.86e-01 100.0% 87.7%
3528111 10.21.1.0 ↗ beta sandwiches › jelly-roll › Jelly-roll domain in ADAMTS13 › Jelly-roll domain in ADAMTS13 0.58 43.0 4.34e-01 97.5% 76.8%
151167 10.3.1.1 ↗ beta sandwiches › jelly-roll › TNF-like › TNF-like › TNF 0.58 52.0 4.79e-01 100.0% 89.1%
1884973 10.3.1.1 ↗ beta sandwiches › jelly-roll › TNF-like › TNF-like › TNF 0.58 52.0 4.84e-01 99.2% 83.3%
3939165 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.58 46.0 4.76e-01 90.9% 91.3%
2866716 11.1.1.17 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Transglut_C 0.58 46.0 4.71e-01 91.7% 91.2%
3945526 10.32.1.8 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › CBM_4_9 0.57 51.0 4.82e-01 100.0% 86.0%
3904967 11.1.1.17 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Transglut_C 0.57 46.0 4.73e-01 90.9% 91.3%
4327245 12.1.1.0 ↗ beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain 0.57 40.0 3.86e-01 77.7% 62.9%
3788140 10.32.1.4 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › EMP24_GP25L 0.57 49.0 4.66e-01 100.0% 78.6%
5025925 10.1.2.0 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) 0.57 51.0 4.60e-01 100.0% 91.8%
3609758 11.2.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain 0.57 47.0 4.34e-01 90.9% 98.1%
3748702 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.57 50.0 3.42e-01 97.5% 63.0%
3916306 10.32.1.179 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › NDNF_C 0.56 43.0 4.59e-01 95.9% 94.3%
3600143 11.2.1.1 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain › C2 0.56 47.0 4.36e-01 90.1% 100.0%
5014955 10.1.2.0 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) 0.55 47.0 4.81e-01 96.7% 95.8%
5034749 10.1.2.194 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) › Lectin_like 0.54 48.0 4.30e-01 97.5% 88.2%
3525299 219.1.1.13 ↗ a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Transglut_core 0.54 47.0 3.24e-01 97.5% 62.6%
4970162 10.1.2.0 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) 0.54 48.0 4.32e-01 97.5% 89.1%
3178885 10.1.1.16 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Peptidase_A4 0.53 48.0 4.00e-01 100.0% 81.3%
3243463 10.32.1.0 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like 0.53 47.0 4.24e-01 98.3% 73.3%
3581667 11.1.4.7 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like › TTR-52 0.52 42.0 4.21e-01 88.4% 84.0%
3281522 10.1.1.16 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Peptidase_A4 0.52 45.0 3.87e-01 98.3% 80.0%
3236909 10.32.1.0 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like 0.52 41.0 4.24e-01 95.9% 90.4%
D3 high residues 227-329
PDB
Domain cluster: rep: NC_047887.1__YP_009795317.1__HOS40_gp059__00110__D440-564
CATH (9)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1wruA02 3.55.50.10 Alpha Beta › 3-Layer(bab) Sandwich › Phage tail protein beta-alpha-beta fold › Baseplate protein-like domains 0.79 53.0 5.73e-01 84.5% 80.7%
3gr5A01 3.55.50.30 Alpha Beta › 3-Layer(bab) Sandwich › Phage tail protein beta-alpha-beta fold › 0.79 49.0 5.36e-01 84.5% 76.5%
4m0nA02 3.55.50.30 Alpha Beta › 3-Layer(bab) Sandwich › Phage tail protein beta-alpha-beta fold › 0.78 50.0 5.73e-01 84.5% 87.0%
3d37A02 3.55.50.10 Alpha Beta › 3-Layer(bab) Sandwich › Phage tail protein beta-alpha-beta fold › Baseplate protein-like domains 0.76 51.0 5.54e-01 83.5% 82.4%
2a02A01 3.55.50.30 Alpha Beta › 3-Layer(bab) Sandwich › Phage tail protein beta-alpha-beta fold › 0.76 49.0 5.58e-01 84.5% 89.3%
7pmpA01 3.55.50.30 Alpha Beta › 3-Layer(bab) Sandwich › Phage tail protein beta-alpha-beta fold › 0.74 48.0 5.54e-01 83.5% 91.9%
3gs9A02 3.55.50.40 Alpha Beta › 3-Layer(bab) Sandwich › Phage tail protein beta-alpha-beta fold › 0.74 49.0 5.17e-01 84.5% 76.1%
4g08A01 3.55.50.30 Alpha Beta › 3-Layer(bab) Sandwich › Phage tail protein beta-alpha-beta fold › 0.73 47.0 5.46e-01 84.5% 94.3%
2vlaA03 1.10.10.2090 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › 0.54 32.0 3.04e-01 94.2% 48.3%
ECOD (16)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3948879 3070.1.1.0 ↗ a+b complex topology › N0 domain in phage tail proteins and secretins-like › N0 domain in phage tail proteins and secretins › N0 domain in phage tail proteins and secretins 0.84 52.0 6.08e-01 84.5% 86.7%
3964700 3070.1.1.0 ↗ a+b complex topology › N0 domain in phage tail proteins and secretins-like › N0 domain in phage tail proteins and secretins › N0 domain in phage tail proteins and secretins 0.83 61.0 6.83e-01 82.5% 97.5%
4008875 3070.1.1.4 ↗ a+b complex topology › N0 domain in phage tail proteins and secretins-like › N0 domain in phage tail proteins and secretins › N0 domain in phage tail proteins and secretins › STN 0.82 51.0 5.95e-01 84.5% 86.7%
3966286 3070.1.1.0 ↗ a+b complex topology › N0 domain in phage tail proteins and secretins-like › N0 domain in phage tail proteins and secretins › N0 domain in phage tail proteins and secretins 0.82 51.0 5.91e-01 84.5% 86.7%
3981376 3070.1.1.0 ↗ a+b complex topology › N0 domain in phage tail proteins and secretins-like › N0 domain in phage tail proteins and secretins › N0 domain in phage tail proteins and secretins 0.81 51.0 5.83e-01 84.5% 86.7%
3163777 3070.1.1.0 ↗ a+b complex topology › N0 domain in phage tail proteins and secretins-like › N0 domain in phage tail proteins and secretins › N0 domain in phage tail proteins and secretins 0.79 49.0 5.54e-01 83.5% 81.2%
185652 3070.1.1.4 ↗ a+b complex topology › N0 domain in phage tail proteins and secretins-like › N0 domain in phage tail proteins and secretins › N0 domain in phage tail proteins and secretins › STN 0.78 49.0 4.53e-01 84.5% 50.8%
4339226 3070.1.1.0 ↗ a+b complex topology › N0 domain in phage tail proteins and secretins-like › N0 domain in phage tail proteins and secretins › N0 domain in phage tail proteins and secretins 0.78 49.0 5.38e-01 84.5% 77.6%
4087530 3070.1.1.0 ↗ a+b complex topology › N0 domain in phage tail proteins and secretins-like › N0 domain in phage tail proteins and secretins › N0 domain in phage tail proteins and secretins 0.78 48.0 5.50e-01 84.5% 85.3%
4048982 3070.1.1.0 ↗ a+b complex topology › N0 domain in phage tail proteins and secretins-like › N0 domain in phage tail proteins and secretins › N0 domain in phage tail proteins and secretins 0.77 48.0 5.41e-01 84.5% 81.2%
3967139 3070.1.1.11 ↗ a+b complex topology › N0 domain in phage tail proteins and secretins-like › N0 domain in phage tail proteins and secretins › N0 domain in phage tail proteins and secretins › type_II_gspD_N0 0.76 49.0 5.51e-01 83.5% 85.0%
5002751 3070.1.1.0 ↗ a+b complex topology › N0 domain in phage tail proteins and secretins-like › N0 domain in phage tail proteins and secretins › N0 domain in phage tail proteins and secretins 0.75 50.0 5.48e-01 100.0% 83.5%
3388174 3070.1.1.0 ↗ a+b complex topology › N0 domain in phage tail proteins and secretins-like › N0 domain in phage tail proteins and secretins › N0 domain in phage tail proteins and secretins 0.73 49.0 5.49e-01 84.5% 88.7%
3941987 3070.1.1.0 ↗ a+b complex topology › N0 domain in phage tail proteins and secretins-like › N0 domain in phage tail proteins and secretins › N0 domain in phage tail proteins and secretins 0.69 46.0 4.97e-01 85.4% 82.4%
1108144 3070.1.1.7 ↗ a+b complex topology › N0 domain in phage tail proteins and secretins-like › N0 domain in phage tail proteins and secretins › N0 domain in phage tail proteins and secretins › FecR_C 0.68 50.0 5.46e-01 100.0% 92.9%
3932953 109.1.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › Glutathione S-transferase (GST)-C › Glutathione S-transferase (GST)-C 0.51 38.0 3.12e-01 80.6% 86.3%
D4 high residues 338-353_419-560
PDB
Domain cluster: rep: KJ534580.1__AHX01182.1__M316_0117__00117__D554-561_649-693_720-800
CATH (11)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4rt0A00 2.40.10.220 Mainly Beta › Beta Barrel › Thrombin, subunit H › predicted glycosyltransferase like domains 0.65 32.0 3.84e-01 98.1% 67.9%
2piaA01 2.40.30.10 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors 0.61 40.0 4.79e-01 79.7% 100.0%
5ejlA02 2.40.10.220 Mainly Beta › Beta Barrel › Thrombin, subunit H › predicted glycosyltransferase like domains 0.60 34.0 3.84e-01 96.8% 71.0%
8gz3B01 2.40.30.10 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors 0.59 35.0 4.35e-01 75.9% 98.9%
2xk0A00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.58 25.0 3.73e-01 78.5% 91.3%
2p5zX01 2.30.110.50 Mainly Beta › Roll › Pnp Oxidase; Chain A › 0.57 31.0 3.11e-01 96.2% 48.8%
2zxqA03 2.60.40.1180 Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II 0.57 33.0 3.24e-01 83.5% 49.4%
2dpyA00 3.40.50.12240 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.56 37.0 2.66e-01 74.1% 24.6%
7ylrA01 2.40.30.10 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors 0.55 36.0 4.38e-01 76.6% 100.0%
2htdB00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.52 31.0 3.52e-01 98.1% 75.8%
4z85A00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.52 39.0 3.60e-01 97.5% 61.4%
ECOD (12)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4319764 1.1.7.17 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › ATP-synt_ab_N 0.71 40.0 4.69e-01 73.4% 78.2%
4943366 1.1.7.0 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C 0.68 37.0 4.93e-01 70.3% 98.8%
4883586 1.1.7.0 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C 0.67 37.0 4.83e-01 70.9% 97.7%
5035362 1.1.7.0 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C 0.63 36.0 4.54e-01 77.8% 96.7%
4946423 1.1.7.138 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › NAD_binding_1 0.62 39.0 4.75e-01 70.9% 98.0%
3976133 1.1.7.0 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C 0.61 37.0 4.62e-01 72.2% 100.0%
5030523 1.1.7.0 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C 0.61 37.0 4.53e-01 70.9% 98.9%
4108039 1.1.8.5 ↗ beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain › tRNA_Me_trans_C 0.60 30.0 3.86e-01 74.7% 84.7%
3291549 1.1.7.0 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C 0.59 39.0 4.67e-01 70.9% 99.0%
3970514 11.1.1.1065 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › PF25971 0.52 31.0 3.64e-01 81.0% 89.0%
4389184 11.1.1.1065 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › PF25971 0.52 31.0 3.65e-01 80.4% 87.6%
4899978 11.1.1.203 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › LacZ_4 0.51 33.0 3.87e-01 75.9% 96.2%