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NC_009237.1__YP_001111205.1__BTHphiE255_0005__00005
Bact-VirNC_009237.1__YP_001111205.1__BTHphiE255_0005__00005
Identity
- Accession:
- NC_009237 ↗
- Kingdom:
- phage
Quality
93.1
mean pLDDT
Taxonomy
TaxID: 2883942
Cluster
View cluster (26 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 30-57_92-173
Domain cluster:
representative
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF05069.19 best | Phage_tail_S | 48.6 | 1.10e-12 | 96.4% | 58.8% |
CATH (11)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5cvrA02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.68 | 29.0 | 3.27e-01 | 95.5% | 51.2% |
| 7l9pK01 | 3.30.900.10 | Alpha Beta › 2-Layer Sandwich › Cell Cycle, Spindle Assembly Checkpoint Protein; Chain A › HORMA domain | 0.61 | 34.0 | 3.39e-01 | 98.2% | 50.4% |
| 3u1nB01 | 1.10.3210.10 | Mainly Alpha › Orthogonal Bundle › Hypothetical protein af1432 › Hypothetical protein af1432 | 0.60 | 51.0 | 3.72e-01 | 96.4% | 51.8% |
| 1xexB00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.58 | 40.0 | 3.49e-01 | 86.4% | 47.8% |
| 7sz8A02 | 2.60.40.60 | Mainly Beta › Sandwich › Immunoglobulin-like › Cadherins | 0.58 | 30.0 | 3.24e-01 | 94.5% | 54.7% |
| 2debA03 | 3.30.559.70 | Alpha Beta › 2-Layer Sandwich › Chloramphenicol Acetyltransferase › Choline/Carnitine o-acyltransferase, domain 2 | 0.56 | 49.0 | 3.63e-01 | 96.4% | 77.3% |
| 1b8aA02 | 3.30.930.10 | Alpha Beta › 2-Layer Sandwich › BirA Bifunctional Protein; domain 2 › Bira Bifunctional Protein; Domain 2 | 0.56 | 38.0 | 2.73e-01 | 70.9% | 57.1% |
| 2jugA01 | 1.10.10.1830 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Non-ribosomal peptide synthase, adenylation domain | 0.52 | 24.0 | 3.06e-01 | 70.0% | 78.2% |
| 1dkqA02 | 3.40.50.1240 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Phosphoglycerate mutase-like | 0.51 | 39.0 | 3.84e-01 | 84.5% | 96.8% |
| 1zcdA00 | 1.20.1530.10 | Mainly Alpha › Up-down Bundle › Na+/H+ antiporter like fold › Na+/H+ antiporter like domain | 0.50 | 45.0 | 3.12e-01 | 99.1% | 59.0% |
| 5kshB01 | 3.90.1310.10 | Alpha Beta › Alpha-Beta Complex › Penicillin-binding protein 2a (Domain 2) › Penicillin-binding protein 2a (Domain 2) | 0.50 | 35.0 | 3.67e-01 | 99.1% | 78.2% |
ECOD (6)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3474634 | 389.1.1.0 ↗ | few secondary structure elements › EGF-like › EGF-related › EGF/Laminin | 0.59 | 24.0 | 3.51e-01 | 74.5% | 97.5% |
| 3927940 | 304.36.1.2 ↗ | a+b two layers › Alpha-beta plaits › YajQ-like › YajQ-like › RVT_1 | 0.58 | 37.0 | 3.81e-01 | 85.5% | 66.7% |
| 5026112 | 3457.1.1.0 ↗ | alpha bundles › GxGD membrane protease › GxGD membrane protease › GxGD membrane protease | 0.54 | 38.0 | 3.05e-01 | 72.7% | 71.8% |
| 1833953 | 3702.1.1.2 ↗ | beta complex topology › Penicillin binding protein dimerisation domain › Penicillin binding protein dimerisation domain › Penicillin binding protein dimerisation domain › PBP_dimer_2 | 0.53 | 30.0 | 3.67e-01 | 87.3% | 100.0% |
| 3712299 | 4106.1.1.1 ↗ | few secondary structure elements › Zinc hairpin stack › Zinc hairpin stack › Zinc hairpin stack › DHHC | 0.52 | 39.0 | 3.21e-01 | 80.0% | 84.2% |
| 4521030 | 3236.1.1.5 ↗ | alpha complex topology › Cation-proton antiporter › Cation-proton antiporter (CPA) › Cation-proton antiporter (CPA) › Na_H_antiport_1 | 0.51 | 43.0 | 3.02e-01 | 95.5% | 59.7% |