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NC_009237.1__YP_001111232.1__BTHphiE255_0032__00032

Bact-Vir

NC_009237.1__YP_001111232.1__BTHphiE255_0032__00032

Identity

Accession:
NC_009237 ↗
Kingdom:
phage

Quality

84.1 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 9-51
PDB
Domain cluster: representative
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF08765.18 best Mor 29.6 8.00e-07 100.0% 39.2%
CATH (69)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2x3mA00 1.25.40.670 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › 0.91 82.0 5.32e-01 97.7% 44.6%
4didB01 1.20.58.450 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Cell division control protein 42 homolog 0.84 73.0 5.35e-01 100.0% 36.8%
3ousA00 1.10.287.70 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.83 72.0 5.81e-01 97.7% 82.9%
5cbgA00 1.10.287.70 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.82 70.0 5.24e-01 95.3% 65.7%
1bi0A02 1.10.60.10 Mainly Alpha › Orthogonal Bundle › Diphtheria Toxin Repressor; domain 2 › Iron dependent repressor, metal binding and dimerisation domain 0.81 59.0 5.15e-01 79.1% 51.5%
8ctsB01 1.10.287.70 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.81 70.0 5.52e-01 97.7% 78.2%
2raeA02 1.10.357.10 Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 0.80 70.0 4.88e-01 100.0% 32.8%
1ufhA00 3.40.630.30 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) 0.80 67.0 4.64e-01 100.0% 31.6%
1ls1A01 1.20.120.140 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › SRP54, nucleotide-binding domain 0.79 70.0 5.48e-01 100.0% 48.3%
4m70B00 1.10.246.200 Mainly Alpha › Orthogonal Bundle › Serum Albumin; Chain A, Domain 1 › WPP domain 0.79 67.0 5.31e-01 100.0% 48.4%
1s8nA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.78 63.0 5.72e-01 90.7% 77.6%
6wshA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.77 62.0 5.76e-01 90.7% 81.8%
3d5lA03 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.77 59.0 5.66e-01 95.3% 73.1%
2gfhA02 1.20.120.710 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Haloacid dehalogenase hydrolase-like domain 0.75 66.0 5.26e-01 100.0% 58.1%
5ekcF01 3.40.605.10 Alpha Beta › 3-Layer(aba) Sandwich › Aldehyde Dehydrogenase; Chain A, domain 1 › Aldehyde Dehydrogenase; Chain A, domain 1 0.75 64.0 3.85e-01 97.7% 14.7%
3q1pA01 6.10.250.1120 Special › Helix non-globular › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › 0.75 54.0 5.71e-01 76.7% 94.9%
1ez0B01 3.40.605.10 Alpha Beta › 3-Layer(aba) Sandwich › Aldehyde Dehydrogenase; Chain A, domain 1 › Aldehyde Dehydrogenase; Chain A, domain 1 0.75 63.0 3.77e-01 97.7% 46.8%
5j6bD01 3.40.605.10 Alpha Beta › 3-Layer(aba) Sandwich › Aldehyde Dehydrogenase; Chain A, domain 1 › Aldehyde Dehydrogenase; Chain A, domain 1 0.74 64.0 3.91e-01 100.0% 15.0%
4i3vA01 3.40.605.10 Alpha Beta › 3-Layer(aba) Sandwich › Aldehyde Dehydrogenase; Chain A, domain 1 › Aldehyde Dehydrogenase; Chain A, domain 1 0.74 62.0 3.82e-01 97.7% 16.0%
3pqaB01 3.40.605.10 Alpha Beta › 3-Layer(aba) Sandwich › Aldehyde Dehydrogenase; Chain A, domain 1 › Aldehyde Dehydrogenase; Chain A, domain 1 0.74 64.0 3.88e-01 97.7% 15.8%
1t90A01 3.40.605.10 Alpha Beta › 3-Layer(aba) Sandwich › Aldehyde Dehydrogenase; Chain A, domain 1 › Aldehyde Dehydrogenase; Chain A, domain 1 0.74 64.0 3.89e-01 100.0% 15.7%
3r64A01 3.40.605.10 Alpha Beta › 3-Layer(aba) Sandwich › Aldehyde Dehydrogenase; Chain A, domain 1 › Aldehyde Dehydrogenase; Chain A, domain 1 0.74 63.0 3.84e-01 97.7% 15.1%
7w5lA01 3.40.605.10 Alpha Beta › 3-Layer(aba) Sandwich › Aldehyde Dehydrogenase; Chain A, domain 1 › Aldehyde Dehydrogenase; Chain A, domain 1 0.74 63.0 3.91e-01 97.7% 16.9%
2f4lA03 3.10.28.20 Alpha Beta › Roll › Endonuclease I-creI › Acetamidase/Formamidase-like domains 0.74 61.0 4.98e-01 100.0% 50.0%
1owfA00 4.10.520.10 Few Secondary Structures › Irregular › HU Protein; Chain A › IHF-like DNA-binding proteins 0.74 56.0 4.32e-01 83.7% 51.0%
3e3vA03 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.73 56.0 5.26e-01 95.3% 67.9%
2hg2A01 3.40.605.10 Alpha Beta › 3-Layer(aba) Sandwich › Aldehyde Dehydrogenase; Chain A, domain 1 › Aldehyde Dehydrogenase; Chain A, domain 1 0.73 61.0 3.73e-01 97.7% 15.0%
2w9mA02 1.10.150.20 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › 5' to 3' exonuclease, C-terminal subdomain 0.73 50.0 4.27e-01 72.1% 51.5%
1uxtA01 3.40.605.10 Alpha Beta › 3-Layer(aba) Sandwich › Aldehyde Dehydrogenase; Chain A, domain 1 › Aldehyde Dehydrogenase; Chain A, domain 1 0.72 61.0 3.76e-01 97.7% 34.8%
4i8qA01 3.40.605.10 Alpha Beta › 3-Layer(aba) Sandwich › Aldehyde Dehydrogenase; Chain A, domain 1 › Aldehyde Dehydrogenase; Chain A, domain 1 0.72 60.0 3.64e-01 97.7% 14.2%
2e62A01 6.10.140.420 Special › Helix non-globular › Helix Hairpins › 0.72 60.0 5.74e-01 100.0% 80.8%
5vbfA01 3.40.605.10 Alpha Beta › 3-Layer(aba) Sandwich › Aldehyde Dehydrogenase; Chain A, domain 1 › Aldehyde Dehydrogenase; Chain A, domain 1 0.71 59.0 3.61e-01 97.7% 14.9%
3rosA01 3.40.605.10 Alpha Beta › 3-Layer(aba) Sandwich › Aldehyde Dehydrogenase; Chain A, domain 1 › Aldehyde Dehydrogenase; Chain A, domain 1 0.71 59.0 3.65e-01 97.7% 16.0%
1kz7A01 1.20.900.10 Mainly Alpha › Up-down Bundle › Dbl Homology Domain; Chain A › Dbl homology (DH) domain 0.71 55.0 3.63e-01 88.4% 85.0%
1euhA01 3.40.605.10 Alpha Beta › 3-Layer(aba) Sandwich › Aldehyde Dehydrogenase; Chain A, domain 1 › Aldehyde Dehydrogenase; Chain A, domain 1 0.70 57.0 3.55e-01 97.7% 15.7%
3vz3A01 3.40.605.10 Alpha Beta › 3-Layer(aba) Sandwich › Aldehyde Dehydrogenase; Chain A, domain 1 › Aldehyde Dehydrogenase; Chain A, domain 1 0.70 57.0 3.58e-01 97.7% 16.3%
1rykA00 1.10.1470.10 Mainly Alpha › Orthogonal Bundle › Protein Yjbj; Chain: A; › YjbJ 0.70 59.0 5.05e-01 95.3% 97.1%
4nmyA01 3.40.190.10 Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II 0.69 55.0 3.61e-01 90.7% 20.3%
3nymA00 6.10.290.10 Special › Helix non-globular › Four Helix Bundle (Hemerythrin (Met), subunit A) › 0.69 54.0 3.81e-01 86.0% 29.0%
3ddhA02 1.10.150.240 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 0.69 55.0 4.66e-01 97.7% 51.9%
6ygiB01 1.10.4090.10 Mainly Alpha › Orthogonal Bundle › Hepatitis B viral capsid (hbcag) fold › Viral capsid, core domain supefamily, Hepatitis B virus 0.69 51.0 3.47e-01 79.1% 23.3%
4yt2A02 1.20.120.1300 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Hmd, C-terminal helical subdomain 0.68 57.0 4.39e-01 100.0% 78.3%
1lkoA01 1.20.1260.10 Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle 0.68 58.0 4.05e-01 100.0% 55.2%
8h72B01 1.10.600.10 Mainly Alpha › Orthogonal Bundle › Farnesyl Diphosphate Synthase › Farnesyl Diphosphate Synthase 0.68 57.0 3.44e-01 100.0% 63.3%
3rh9A01 3.40.605.10 Alpha Beta › 3-Layer(aba) Sandwich › Aldehyde Dehydrogenase; Chain A, domain 1 › Aldehyde Dehydrogenase; Chain A, domain 1 0.67 55.0 3.43e-01 100.0% 31.8%
7lb8B01 1.10.3470.10 Mainly Alpha › Orthogonal Bundle › ABC transporter involved in vitamin B12 uptake, BtuC › ABC transporter involved in vitamin B12 uptake, BtuC 0.67 55.0 3.34e-01 100.0% 13.6%
4cc9B00 1.20.5.4730 Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › 0.67 57.0 4.53e-01 100.0% 46.9%
3iieB03 1.10.1740.10 Mainly Alpha › Orthogonal Bundle › Rna Polymerase Sigma Factor; Chain: A › RNA polymerase sigma factor, region 2, helix turn helix motif 0.67 52.0 4.38e-01 100.0% 48.2%
6ldiF01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.67 54.0 4.38e-01 100.0% 59.4%
1qusA01 1.10.8.350 Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Bacterial muramidase 0.67 53.0 3.88e-01 86.0% 79.6%
3if8B02 1.20.58.730 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.67 56.0 4.43e-01 100.0% 43.0%
2y1eA03 1.10.1740.10 Mainly Alpha › Orthogonal Bundle › Rna Polymerase Sigma Factor; Chain: A › RNA polymerase sigma factor, region 2, helix turn helix motif 0.66 54.0 4.48e-01 100.0% 66.7%
1mjtB01 3.90.340.10 Alpha Beta › Alpha-Beta Complex › Nitric Oxide Synthase; Chain A, domain 1 › Nitric Oxide Synthase; Chain A, domain 1 0.66 52.0 3.79e-01 90.7% 31.0%
6mh4A03 1.10.1740.10 Mainly Alpha › Orthogonal Bundle › Rna Polymerase Sigma Factor; Chain: A › RNA polymerase sigma factor, region 2, helix turn helix motif 0.66 54.0 4.60e-01 100.0% 67.1%
3uorB02 3.40.190.10 Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II 0.65 53.0 3.48e-01 95.3% 19.9%
3c24A02 1.10.3640.10 Mainly Alpha › Orthogonal Bundle › putative oxidoreductase fold › Semialdehyde dehydrogenase-like, C-terminal 0.65 55.0 4.28e-01 100.0% 61.0%
4mfiA00 3.40.190.10 Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II 0.64 53.0 3.15e-01 100.0% 71.2%
4m70I00 1.20.5.4130 Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › 0.64 51.0 3.85e-01 90.7% 52.8%
3pwfA01 1.20.1260.10 Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle 0.64 54.0 3.78e-01 93.0% 32.1%
1pu6A01 1.10.1670.10 Mainly Alpha › Orthogonal Bundle › Endonuclease Iii, domain 2 › Helix-hairpin-Helix base-excision DNA repair enzymes (C-terminal) 0.63 56.0 4.32e-01 100.0% 63.8%
8igrI01 2.40.270.10 Mainly Beta › Beta Barrel › Dna-directed Rna Polymerase Ii 140kd Polypeptide; Chain: B; Domain 6 › DNA-directed RNA polymerase, subunit 2, domain 6 0.62 53.0 3.61e-01 100.0% 74.4%
1f5xA00 1.20.900.10 Mainly Alpha › Up-down Bundle › Dbl Homology Domain; Chain A › Dbl homology (DH) domain 0.62 47.0 3.10e-01 95.3% 18.3%
1j30A00 1.20.1260.10 Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle 0.62 52.0 3.55e-01 93.0% 29.8%
1lrzA03 1.20.58.90 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.60 48.0 4.30e-01 95.3% 62.9%
1ydxA02 1.10.287.1120 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Bipartite methylase S protein 0.60 46.0 3.64e-01 86.0% 43.3%
2rklF00 1.20.5.420 Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › Immunoglobulin FC, subunit C 0.59 51.0 4.78e-01 95.3% 82.7%
3rlfF01 1.20.58.370 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › MalF N-terminal region-like 0.59 50.0 4.01e-01 95.3% 61.6%
1m4rB00 1.20.1250.10 Mainly Alpha › Up-down Bundle › Growth Hormone; Chain: A; › 0.59 48.0 3.42e-01 95.3% 68.1%
2mpkA00 1.20.58.80 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphotransferase system, lactose/cellobiose-type IIA subunit 0.56 48.0 4.06e-01 100.0% 59.5%
ECOD (62)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3282323 7064.1.1.9 alpha bundles › Transmembrane domain of VIT1 › Transmembrane domain of VIT1 › Transmembrane domain of VIT1 › GtrA_DPMS_TM 0.94 85.0 5.69e-01 100.0% 29.7%
5036922 101.1.2.652 alpha arrays › HTH › HTH › winged helix domain › Fe_dep_repr_C 0.93 79.0 5.41e-01 93.0% 30.0%
4951422 5054.1.1.6 alpha complex topology › Voltage-gated ion channels › Voltage-gated ion channels › Voltage-gated ion channels › TrkH 0.93 85.0 6.29e-01 100.0% 68.0%
5042174 101.1.2.652 alpha arrays › HTH › HTH › winged helix domain › Fe_dep_repr_C 0.92 77.0 5.26e-01 93.0% 28.9%
5083432 3236.1.1.1 alpha complex topology › Cation-proton antiporter › Cation-proton antiporter (CPA) › Cation-proton antiporter (CPA) › Na_H_Exchanger 0.92 83.0 4.97e-01 100.0% 16.2%
4954814 7516.1.1.2 a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Glycos_transf_2 0.91 82.0 4.75e-01 100.0% 12.5%
3434185 7018.1.1.0 few secondary structure elements › gp76 helical domain › gp76 helical domain › gp76 helical domain 0.91 77.0 7.97e-01 93.0% 100.0%
5043111 3542.1.1.2 alpha arrays › Presenilin family intramembrane aspartate proteases › Presenilin family intramembrane aspartate proteases › Presenilin family intramembrane aspartate proteases › SPP 0.91 81.0 4.93e-01 100.0% 17.2%
3929290 614.1.1.0 alpha duplicates or obligate multimers › L27 domain › L27 domain › L27 domain 0.90 80.0 6.69e-01 97.7% 60.0%
3341345 6026.1.1.0 alpha duplicates or obligate multimers › cwf21 domain › cwf21 domain › cwf21 domain 0.90 80.0 5.57e-01 100.0% 33.1%
3663214 148.1.3.0 alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain 0.90 80.0 5.52e-01 100.0% 31.9%
4951198 101.1.2.652 alpha arrays › HTH › HTH › winged helix domain › Fe_dep_repr_C 0.90 77.0 5.42e-01 93.0% 33.3%
4956886 101.1.2.652 alpha arrays › HTH › HTH › winged helix domain › Fe_dep_repr_C 0.90 76.0 5.15e-01 93.0% 28.6%
3603679 183.1.1.0 alpha duplicates or obligate multimers › Iron-dependent repressor protein, dimerization domain › Iron-dependent repressor protein, dimerization domain › Iron-dependent repressor protein, dimerization domain 0.90 77.0 5.41e-01 93.0% 33.3%
3368905 103.4.1.0 alpha arrays › RuvA-C › Elongation factor TFIIS domain 2/ Kix domain of creb binding protein › Elongation factor TFIIS domain 2/ Kix domain of creb binding protein 0.89 80.0 6.31e-01 100.0% 50.6%
5012052 101.1.2.652 alpha arrays › HTH › HTH › winged helix domain › Fe_dep_repr_C 0.89 75.0 5.22e-01 97.7% 30.8%
4969962 5054.1.1.0 alpha complex topology › Voltage-gated ion channels › Voltage-gated ion channels › Voltage-gated ion channels 0.88 79.0 5.62e-01 100.0% 56.7%
4950752 7516.1.1.2 a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Glycos_transf_2 0.88 78.0 4.51e-01 100.0% 11.8%
4004120 1075.5.1.5 alpha bundles › Type II ABC exporter transmembrane domain fold › Multidrug and toxic compound extrusion (MATE) transporter › Multidrug and toxic compound extrusion (MATE) transporter › Rft-1 0.88 78.0 4.41e-01 100.0% 10.2%
3764818 4120.1.1.68 few secondary structure elements › Tim10/DDP › Tim10/DDP › Tim10/DDP › TMEM65 0.87 78.0 5.62e-01 100.0% 41.7%
3799156 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.87 72.0 5.94e-01 90.7% 56.8%
4937043 7516.1.1.2 a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Glycos_transf_2 0.87 75.0 4.36e-01 100.0% 11.8%
4984680 3962.1.1.1 alpha arrays › N-terminal helical domain in restriction-modification system methylation subunit-like › N-terminal helical domain in restriction-modification system methylation subunit › N-terminal helical domain in restriction-modification system methylation subunit › HsdM_N 0.87 73.0 4.76e-01 100.0% 23.5%
5043797 3542.1.1.1 alpha arrays › Presenilin family intramembrane aspartate proteases › Presenilin family intramembrane aspartate proteases › Presenilin family intramembrane aspartate proteases › Presenilin 0.87 75.0 4.55e-01 100.0% 15.6%
4936146 101.35.1.0 alpha arrays › HTH › DNA repair regulatory protein RecX › DNA repair regulatory protein RecX 0.86 74.0 6.81e-01 97.7% 74.5%
4985324 101.1.2.652 alpha arrays › HTH › HTH › winged helix domain › Fe_dep_repr_C 0.85 71.0 4.75e-01 93.0% 25.8%
4433737 5067.1.1.1 alpha bundles › Multidrug efflux transporter AcrB transmembrane domain › Multidrug efflux transporter AcrB transmembrane domain › Multidrug efflux transporter AcrB transmembrane domain › ACR_tran 0.85 75.0 4.68e-01 100.0% 18.7%
3700304 5076.1.1.1 alpha complex topology › Mitochondrial ADP/ATP carrier-like › Mitochondrial ADP/ATP carrier › Mitochondrial ADP/ATP carrier › Mito_carr 0.85 74.0 4.33e-01 100.0% 12.9%
5039496 101.1.2.914 alpha arrays › HTH › HTH › winged helix domain › DUF6015 0.85 76.0 5.83e-01 97.7% 47.8%
3972086 5067.1.1.1 alpha bundles › Multidrug efflux transporter AcrB transmembrane domain › Multidrug efflux transporter AcrB transmembrane domain › Multidrug efflux transporter AcrB transmembrane domain › ACR_tran 0.84 75.0 4.65e-01 100.0% 19.1%
5080068 186.1.1.0 alpha arrays › lambda integrase-N-like › lambda integrase-N › lambda integrase-N 0.84 71.0 5.42e-01 97.7% 41.0%
3503552 5054.1.1.0 alpha complex topology › Voltage-gated ion channels › Voltage-gated ion channels › Voltage-gated ion channels 0.83 72.0 5.05e-01 100.0% 40.3%
3497137 5076.1.1.1 alpha complex topology › Mitochondrial ADP/ATP carrier-like › Mitochondrial ADP/ATP carrier › Mitochondrial ADP/ATP carrier › Mito_carr 0.83 72.0 4.29e-01 100.0% 14.3%
3784553 592.1.1.6 alpha arrays › PWI domain-like › PWI domain › PWI domain › Nab2 0.83 72.0 5.77e-01 100.0% 55.3%
4984675 101.1.2.21 alpha arrays › HTH › HTH › winged helix domain › Fe_dep_repress 0.82 69.0 4.98e-01 93.0% 33.3%
3215052 198.1.1.0 alpha arrays › Saposin-like › Saposin-like › Saposin-like 0.82 72.0 5.75e-01 100.0% 50.6%
1866912 5054.1.1.8 alpha complex topology › Voltage-gated ion channels › Voltage-gated ion channels › Voltage-gated ion channels › Ion_trans_2 0.82 69.0 5.21e-01 95.3% 65.7%
3174987 5076.1.1.1 alpha complex topology › Mitochondrial ADP/ATP carrier-like › Mitochondrial ADP/ATP carrier › Mitochondrial ADP/ATP carrier › Mito_carr 0.82 70.0 4.19e-01 100.0% 14.2%
None 0.82 70.0 4.79e-01 100.0% 31.6%
5079060 5065.1.1.1 alpha bundles › Type II ABC importer transmembrane domain fold › Type II ABC importer transmembrane domain fold › Type II ABC importer transmembrane domain fold › ABC-3 0.81 68.0 4.19e-01 100.0% 15.6%
3552352 198.1.1.0 alpha arrays › Saposin-like › Saposin-like › Saposin-like 0.81 70.0 5.65e-01 100.0% 54.1%
4596871 5065.1.1.1 alpha bundles › Type II ABC importer transmembrane domain fold › Type II ABC importer transmembrane domain fold › Type II ABC importer transmembrane domain fold › ABC-3 0.81 69.0 4.07e-01 95.3% 14.1%
3923696 198.1.1.0 alpha arrays › Saposin-like › Saposin-like › Saposin-like 0.81 71.0 5.56e-01 100.0% 51.1%
3737750 109.4.1.255 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_22 0.80 66.0 4.51e-01 95.3% 26.5%
4150602 5065.1.1.1 alpha bundles › Type II ABC importer transmembrane domain fold › Type II ABC importer transmembrane domain fold › Type II ABC importer transmembrane domain fold › ABC-3 0.79 69.0 4.08e-01 100.0% 20.6%
3596071 198.1.1.0 alpha arrays › Saposin-like › Saposin-like › Saposin-like 0.79 65.0 5.05e-01 100.0% 42.0%
5022995 5067.1.1.4 alpha bundles › Multidrug efflux transporter AcrB transmembrane domain › Multidrug efflux transporter AcrB transmembrane domain › Multidrug efflux transporter AcrB transmembrane domain › MMPL 0.78 66.0 4.33e-01 100.0% 24.3%
4960441 5076.2.1.18 alpha complex topology › Mitochondrial ADP/ATP carrier-like › Putative sulfate permease CysZ › Putative sulfate permease CysZ › DUF6159 0.77 67.0 4.14e-01 100.0% 20.0%
5003091 103.1.1.0 alpha arrays › RuvA-C › RuvA-C, UBA, CRAL/TRIO-N, HBS1 › UBA-like domain 0.76 65.0 5.84e-01 95.3% 71.7%
4540106 3396.1.1.3 extended segments › HIG1 domain family member 1A › HIG1 domain family member 1A › HIG1 domain family member 1A › DUF4481 0.76 64.0 5.33e-01 100.0% 53.8%
3979831 148.1.3.0 alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain 0.76 59.0 5.25e-01 97.7% 58.5%
5065662 5058.1.1.0 alpha bundles › Mechanosensitive channel protein MscS (YggB), transmembrane region › Mechanosensitive channel protein MscS (YggB), transmembrane region › Mechanosensitive channel protein MscS (YggB), transmembrane region 0.76 65.0 5.54e-01 97.7% 61.4%
5055460 7516.1.1.2 a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Glycos_transf_2 0.76 58.0 3.47e-01 86.0% 13.0%
3167160 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.74 62.0 3.48e-01 100.0% 7.8%
5034715 5065.1.1.1 alpha bundles › Type II ABC importer transmembrane domain fold › Type II ABC importer transmembrane domain fold › Type II ABC importer transmembrane domain fold › ABC-3 0.74 62.0 3.81e-01 100.0% 16.1%
None 0.74 62.0 3.64e-01 95.3% 12.1%
1889963 7524.1.1.1 a/b three-layered sandwiches › ALDH-like › ALDH-like › ALDH-like › Aldedh 0.73 62.0 3.83e-01 97.7% 37.6%
3944665 605.1.1.168 alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase › Aldedh 0.73 61.0 4.55e-01 97.7% 37.4%
4103296 3646.1.1.1 alpha complex topology › T-component of energy-coupling factor (ECF) transporters › T-component of energy-coupling factor (ECF) transporters › T-component of energy-coupling factor (ECF) transporters › CbiQ 0.72 62.0 3.95e-01 100.0% 19.1%
4941824 2498.1.1.10 mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" › Peptidase_M48 0.71 59.0 3.62e-01 100.0% 14.4%
3995291 103.1.1.0 alpha arrays › RuvA-C › RuvA-C, UBA, CRAL/TRIO-N, HBS1 › UBA-like domain 0.64 50.0 4.61e-01 100.0% 64.6%
3255713 605.4.1.0 alpha duplicates or obligate multimers › ROP-like › ROP protein › ROP protein 0.57 49.0 4.84e-01 97.7% 97.8%
D2 high residues 68-111
PDB
Domain cluster: representative
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF08765.18 best Mor 65.3 6.50e-18 100.0% 40.2%
CATH (86)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1rr7A02 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.93 78.0 7.55e-01 95.5% 83.3%
2o8xA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.89 78.0 6.89e-01 95.5% 72.1%
2lfwA01 1.20.140.160 Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › PhyR, sigma-like (SL) domain 0.88 79.0 5.41e-01 100.0% 32.6%
3p7nA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.87 76.0 6.34e-01 95.5% 59.7%
3ulqB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.87 76.0 6.89e-01 95.5% 74.1%
6v7xB02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.86 76.0 6.93e-01 95.5% 76.8%
2f2cA02 1.10.472.10 Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like 0.86 78.0 5.79e-01 100.0% 52.8%
3t0yA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.86 77.0 6.85e-01 97.7% 75.0%
6uglB02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.86 74.0 6.67e-01 93.2% 72.4%
2oap202 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.86 69.0 4.13e-01 86.4% 80.1%
2w7nA00 1.10.10.2690 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › 0.86 76.0 5.88e-01 100.0% 48.9%
5y2vC01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.85 74.0 5.88e-01 95.5% 50.6%
3hugA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.85 76.0 6.17e-01 100.0% 57.5%
2rn7A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.85 74.0 6.47e-01 97.7% 77.3%
1g3nC01 1.10.472.10 Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like 0.84 75.0 5.41e-01 100.0% 43.3%
2w9zA01 1.10.472.10 Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like 0.84 75.0 5.23e-01 100.0% 77.4%
6cc0A02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.83 71.0 6.08e-01 95.5% 61.4%
1fc3B00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.83 73.0 5.56e-01 100.0% 58.4%
1j1vA00 1.10.1750.10 Mainly Alpha › Orthogonal Bundle › Chromosomal Replication Initiator Protein Dnaa; Chain: A; › DnaA protein, C-terminal DNA-binding domain 0.83 73.0 5.67e-01 100.0% 50.0%
2esnA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.82 70.0 5.46e-01 93.2% 47.2%
2lvsA01 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.82 68.0 6.30e-01 93.2% 75.0%
1x2nA01 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.82 73.0 6.59e-01 100.0% 90.0%
6g1dA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.82 70.0 5.68e-01 95.5% 52.4%
5y9sC01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.82 71.0 5.72e-01 95.5% 52.4%
1j5yA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.82 70.0 6.13e-01 93.2% 70.3%
2elhA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.82 67.0 5.85e-01 90.9% 62.1%
4go1A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.81 72.0 6.70e-01 97.7% 83.3%
6jqsA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.81 73.0 6.28e-01 100.0% 77.6%
2dbbB01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.81 68.0 6.36e-01 93.2% 80.0%
2e7xA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.81 68.0 6.46e-01 93.2% 84.6%
2q0oA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.81 72.0 6.22e-01 100.0% 77.6%
4jp0A03 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.80 57.0 6.16e-01 77.3% 100.0%
5z4zC00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.80 67.0 5.39e-01 95.5% 50.0%
2z99A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.80 71.0 5.64e-01 100.0% 55.2%
3hhgE01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.79 67.0 5.34e-01 95.5% 48.9%
1l3lA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.79 66.0 5.94e-01 95.5% 68.3%
4u7bA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.79 59.0 6.24e-01 81.8% 100.0%
4pcqA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.79 66.0 6.31e-01 90.9% 86.0%
3fxqB01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.79 67.0 5.28e-01 95.5% 47.8%
2ia0A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.78 65.0 6.14e-01 93.2% 81.5%
4rocA01 1.10.472.10 Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like 0.77 63.0 4.82e-01 93.2% 87.4%
1znnA00 3.20.20.70 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I 0.77 59.0 3.64e-01 84.1% 15.1%
3dv8A02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.77 65.0 5.34e-01 93.2% 62.8%
2h09A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.77 64.0 5.47e-01 93.2% 67.6%
3tgnB02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.76 63.0 5.64e-01 93.2% 68.3%
4kmfA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.76 63.0 5.66e-01 93.2% 71.0%
1s3jA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.76 63.0 5.60e-01 93.2% 68.8%
1on2A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.76 64.0 5.42e-01 93.2% 62.5%
2da7A00 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.76 66.0 5.67e-01 100.0% 71.8%
2mgqA00 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.76 62.0 5.54e-01 100.0% 75.0%
2da3A01 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.76 59.0 5.84e-01 88.6% 97.9%
5dukB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.76 63.0 5.46e-01 93.2% 61.2%
4ha8A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.76 68.0 6.01e-01 100.0% 98.4%
2ofyA01 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.75 52.0 4.42e-01 72.7% 48.6%
4wcgA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.75 62.0 5.60e-01 93.2% 72.1%
3bddD00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.75 62.0 4.41e-01 93.2% 33.3%
1zarA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.74 61.0 4.79e-01 90.9% 50.6%
4ijaA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.74 61.0 5.41e-01 93.2% 65.1%
2p0wA03 1.10.10.390 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › 0.73 61.0 5.76e-01 95.5% 92.6%
2vxzA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.73 60.0 5.31e-01 93.2% 65.2%
4fx0A00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.73 58.0 4.23e-01 90.9% 32.0%
7l1iA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.73 60.0 4.12e-01 93.2% 29.4%
2hr3D02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.72 59.0 5.32e-01 93.2% 67.7%
4o5vA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.72 63.0 5.39e-01 97.7% 83.1%
2p5vA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.72 59.0 5.65e-01 93.2% 86.5%
1z05A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.72 58.0 5.04e-01 93.2% 56.9%
2cfxA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.72 64.0 6.16e-01 100.0% 92.0%
3ecoB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.72 59.0 4.23e-01 93.2% 33.3%
3g3zA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.71 59.0 5.24e-01 93.2% 71.9%
2d1hB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.71 60.0 4.70e-01 97.7% 63.3%
1lj9B00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.71 60.0 4.25e-01 97.7% 43.0%
2ys9A00 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.71 63.0 5.32e-01 97.7% 71.4%
5y6iA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.71 60.0 5.14e-01 97.7% 78.1%
1sfxB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.71 62.0 4.70e-01 100.0% 67.3%
1u8bA02 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.70 53.0 4.90e-01 86.4% 68.9%
3cuqB03 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.70 57.0 4.95e-01 93.2% 59.4%
2qwwC00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.69 59.0 4.18e-01 97.7% 39.9%
3lmmB05 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.69 54.0 5.01e-01 93.2% 73.8%
3d0sA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.69 57.0 4.72e-01 93.2% 70.0%
3cuoD00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.69 55.0 4.41e-01 93.2% 43.6%
1lnwF01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.68 58.0 4.27e-01 100.0% 46.0%
2go7A02 1.10.150.240 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 0.68 55.0 4.91e-01 95.5% 83.6%
2xrnB01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.67 58.0 5.18e-01 100.0% 87.5%
1mkmB01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.66 55.0 4.76e-01 100.0% 81.6%
2fjrA01 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.65 51.0 4.20e-01 84.1% 52.6%
2k9lA00 1.10.10.1330 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › RNA polymerase sigma-54 factor, core-binding domain 0.64 55.0 4.68e-01 100.0% 76.3%
ECOD (96)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3165428 101.1.1.43 alpha arrays › HTH › HTH › Three-helical HTH › Mor 0.99 93.0 7.95e-01 100.0% 67.7%
3383758 101.1.1.201 alpha arrays › HTH › HTH › Three-helical HTH › Bot1p 0.96 90.0 6.53e-01 100.0% 45.7%
2556 101.1.1.43 alpha arrays › HTH › HTH › Three-helical HTH › Mor 0.93 78.0 7.55e-01 95.5% 83.3%
4370821 101.1.2.1 alpha arrays › HTH › HTH › winged helix domain › HTH_1 0.87 76.0 6.00e-01 95.5% 50.6%
3727217 101.1.2.384 alpha arrays › HTH › HTH › winged helix domain › Myb_DNA-bind_8 0.86 76.0 7.27e-01 97.7% 98.0%
3970951 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.86 65.0 6.22e-01 81.8% 74.0%
3466087 101.1.1.253 alpha arrays › HTH › HTH › Three-helical HTH › HTH_CLF_N 0.86 68.0 6.55e-01 88.6% 90.0%
3972217 101.1.2.1 alpha arrays › HTH › HTH › winged helix domain › HTH_1 0.85 74.0 5.78e-01 95.5% 47.8%
3589664 101.1.2.1 alpha arrays › HTH › HTH › winged helix domain › HTH_1 0.85 73.0 5.80e-01 95.5% 50.6%
4956290 101.1.2.141 alpha arrays › HTH › HTH › winged helix domain › HTH_24 0.85 72.0 6.29e-01 93.2% 67.7%
3509240 101.1.1.24 alpha arrays › HTH › HTH › Three-helical HTH › CENP-B_N 0.84 73.0 6.31e-01 93.2% 63.1%
3387117 101.1.2.1 alpha arrays › HTH › HTH › winged helix domain › HTH_1 0.84 73.0 5.92e-01 95.5% 53.8%
4009354 101.1.2.1 alpha arrays › HTH › HTH › winged helix domain › HTH_1 0.84 72.0 5.66e-01 95.5% 47.8%
4297810 101.1.2.1 alpha arrays › HTH › HTH › winged helix domain › HTH_1 0.83 72.0 5.64e-01 95.5% 47.8%
5028932 101.1.2.141 alpha arrays › HTH › HTH › winged helix domain › HTH_24 0.83 71.0 6.38e-01 93.2% 75.0%
4962128 101.1.2.141 alpha arrays › HTH › HTH › winged helix domain › HTH_24 0.83 71.0 6.04e-01 93.2% 62.9%
4032354 101.1.2.1 alpha arrays › HTH › HTH › winged helix domain › HTH_1 0.83 71.0 5.59e-01 95.5% 47.8%
4977106 101.1.2.141 alpha arrays › HTH › HTH › winged helix domain › HTH_24 0.83 71.0 6.17e-01 93.2% 67.7%
3511100 101.1.2.141 alpha arrays › HTH › HTH › winged helix domain › HTH_24 0.83 70.0 6.52e-01 93.2% 81.8%
3946548 101.1.2.1 alpha arrays › HTH › HTH › winged helix domain › HTH_1 0.83 71.0 5.59e-01 95.5% 47.8%
5074939 101.1.4.0 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like 0.83 69.0 6.39e-01 90.9% 74.5%
4985650 101.1.2.141 alpha arrays › HTH › HTH › winged helix domain › HTH_24 0.82 71.0 5.86e-01 93.2% 60.0%
5028998 101.1.2.140 alpha arrays › HTH › HTH › winged helix domain › HTH_AsnC-type 0.82 70.0 6.52e-01 93.2% 81.8%
4010472 101.1.2.141 alpha arrays › HTH › HTH › winged helix domain › HTH_24 0.82 69.0 6.67e-01 93.2% 88.0%
2572 101.1.2.140 alpha arrays › HTH › HTH › winged helix domain › HTH_AsnC-type 0.82 69.0 6.09e-01 93.2% 71.4%
5083248 101.1.2.140 alpha arrays › HTH › HTH › winged helix domain › HTH_AsnC-type 0.82 70.0 6.31e-01 93.2% 73.3%
3994952 104.1.1.0 alpha duplicates or obligate multimers › TFIIA, alpha-helical domain › TFIIA, alpha-helical domain › TFIIA, alpha-helical domain 0.82 64.0 5.17e-01 84.1% 80.0%
4978382 101.1.2.140 alpha arrays › HTH › HTH › winged helix domain › HTH_AsnC-type 0.82 70.0 6.47e-01 93.2% 80.0%
3978224 101.1.2.1 alpha arrays › HTH › HTH › winged helix domain › HTH_1 0.82 70.0 5.52e-01 95.5% 47.8%
4941943 101.1.2.140 alpha arrays › HTH › HTH › winged helix domain › HTH_AsnC-type 0.82 70.0 6.29e-01 93.2% 73.3%
5052610 101.1.2.141 alpha arrays › HTH › HTH › winged helix domain › HTH_24 0.82 69.0 6.22e-01 93.2% 73.3%
4945903 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.82 68.0 6.35e-01 93.2% 83.6%
5033230 101.1.2.141 alpha arrays › HTH › HTH › winged helix domain › HTH_24 0.81 70.0 6.45e-01 93.2% 81.8%
4964807 101.1.2.141 alpha arrays › HTH › HTH › winged helix domain › HTH_24 0.81 68.0 6.28e-01 90.9% 78.2%
5030106 101.1.2.140 alpha arrays › HTH › HTH › winged helix domain › HTH_AsnC-type 0.81 68.0 6.36e-01 93.2% 80.0%
3938616 101.1.1.1 alpha arrays › HTH › HTH › Three-helical HTH › Homeodomain 0.81 71.0 5.53e-01 100.0% 54.7%
4947595 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.81 69.0 5.73e-01 93.2% 58.7%
3957509 101.1.2.140 alpha arrays › HTH › HTH › winged helix domain › HTH_AsnC-type 0.81 70.0 6.28e-01 93.2% 73.3%
5056141 101.1.2.141 alpha arrays › HTH › HTH › winged helix domain › HTH_24 0.81 69.0 6.43e-01 93.2% 80.0%
3282258 101.1.2.141 alpha arrays › HTH › HTH › winged helix domain › HTH_24 0.81 69.0 5.87e-01 93.2% 64.3%
4944981 101.1.2.873 alpha arrays › HTH › HTH › winged helix domain › AsnC_trans_reg 0.81 68.0 6.31e-01 93.2% 80.0%
5082754 101.1.2.141 alpha arrays › HTH › HTH › winged helix domain › HTH_24 0.81 68.0 6.15e-01 93.2% 68.3%
5072420 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.81 67.0 6.45e-01 93.2% 88.0%
5076741 101.1.2.141 alpha arrays › HTH › HTH › winged helix domain › HTH_24 0.81 73.0 7.01e-01 100.0% 92.0%
5073261 101.1.2.140 alpha arrays › HTH › HTH › winged helix domain › HTH_AsnC-type 0.80 70.0 6.01e-01 97.7% 65.7%
4978144 101.1.2.141 alpha arrays › HTH › HTH › winged helix domain › HTH_24 0.80 71.0 6.38e-01 97.7% 78.3%
3289544 101.1.2.140 alpha arrays › HTH › HTH › winged helix domain › HTH_AsnC-type 0.80 69.0 6.03e-01 93.2% 67.7%
4985252 101.1.2.141 alpha arrays › HTH › HTH › winged helix domain › HTH_24 0.80 67.0 5.88e-01 93.2% 67.7%
5012421 101.1.2.889 alpha arrays › HTH › HTH › winged helix domain › Arc_trans_TRASH 0.80 68.0 5.12e-01 93.2% 41.9%
5000424 101.1.2.140 alpha arrays › HTH › HTH › winged helix domain › HTH_AsnC-type 0.80 70.0 6.33e-01 97.7% 78.3%
5070623 101.1.6.0 alpha arrays › HTH › HTH › TrpR 0.80 68.0 6.61e-01 100.0% 90.0%
3959624 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.80 66.0 6.36e-01 90.9% 86.0%
5028930 101.1.2.141 alpha arrays › HTH › HTH › winged helix domain › HTH_24 0.80 68.0 6.09e-01 93.2% 75.0%
5030108 101.1.2.141 alpha arrays › HTH › HTH › winged helix domain › HTH_24 0.79 70.0 6.50e-01 97.7% 83.6%
3527457 101.1.1.52 alpha arrays › HTH › HTH › Three-helical HTH › BrkDBD 0.79 67.0 6.22e-01 97.7% 74.5%
5055912 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.79 67.0 5.72e-01 93.2% 58.6%
5010215 101.1.2.141 alpha arrays › HTH › HTH › winged helix domain › HTH_24 0.79 66.0 5.99e-01 93.2% 73.3%
5030813 101.1.2.141 alpha arrays › HTH › HTH › winged helix domain › HTH_24 0.79 68.0 6.50e-01 93.2% 88.0%
4966151 101.1.2.140 alpha arrays › HTH › HTH › winged helix domain › HTH_AsnC-type 0.79 70.0 5.82e-01 97.7% 62.7%
4977346 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.79 66.0 6.33e-01 93.2% 90.0%
4574919 2002.1.1.71 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › SOR_SNZ 0.79 58.0 3.53e-01 81.8% 12.6%
5068679 101.1.2.30 alpha arrays › HTH › HTH › winged helix domain › TrmB 0.79 66.0 6.16e-01 93.2% 74.5%
4931184 101.1.2.140 alpha arrays › HTH › HTH › winged helix domain › HTH_AsnC-type 0.79 67.0 6.26e-01 93.2% 80.0%
4975730 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.78 66.0 5.60e-01 93.2% 62.9%
3225517 101.1.1.24 alpha arrays › HTH › HTH › Three-helical HTH › CENP-B_N 0.78 65.0 5.59e-01 97.7% 58.6%
5011763 101.1.2.141 alpha arrays › HTH › HTH › winged helix domain › HTH_24 0.78 64.0 5.99e-01 93.2% 80.0%
4973395 101.1.2.140 alpha arrays › HTH › HTH › winged helix domain › HTH_AsnC-type 0.78 67.0 6.02e-01 93.2% 73.3%
5034428 101.1.2.139 alpha arrays › HTH › HTH › winged helix domain › HTH_23 0.78 65.0 6.25e-01 93.2% 82.0%
4945307 101.1.2.873 alpha arrays › HTH › HTH › winged helix domain › AsnC_trans_reg 0.78 67.0 6.10e-01 97.7% 76.7%
4980888 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.78 64.0 5.67e-01 93.2% 63.1%
4948128 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.78 66.0 5.73e-01 93.2% 64.6%
4961377 101.1.2.140 alpha arrays › HTH › HTH › winged helix domain › HTH_AsnC-type 0.78 66.0 5.63e-01 93.2% 65.7%
4944620 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.77 67.0 6.18e-01 93.2% 80.0%
3711074 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.77 65.0 5.67e-01 93.2% 66.2%
4233438 101.1.1.226 alpha arrays › HTH › HTH › Three-helical HTH › UPF0240 0.77 61.0 5.47e-01 90.9% 66.2%
5037302 101.1.2.141 alpha arrays › HTH › HTH › winged helix domain › HTH_24 0.77 67.0 6.09e-01 100.0% 76.7%
5055914 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.77 64.0 5.97e-01 93.2% 74.5%
5060354 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.77 64.0 5.63e-01 93.2% 63.1%
4943799 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.76 67.0 6.45e-01 97.7% 92.0%
4957813 101.1.2.141 alpha arrays › HTH › HTH › winged helix domain › HTH_24 0.76 63.0 5.57e-01 93.2% 69.2%
4665755 101.1.1.470 alpha arrays › HTH › HTH › Three-helical HTH › Phage_terminase 0.76 61.0 5.89e-01 88.6% 86.0%
5039985 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.76 64.0 5.61e-01 93.2% 72.3%
4945048 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.75 63.0 5.89e-01 93.2% 74.5%
5062184 101.1.2.141 alpha arrays › HTH › HTH › winged helix domain › HTH_24 0.75 62.0 5.63e-01 93.2% 68.3%
5032612 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.75 64.0 5.99e-01 97.7% 78.2%
4974022 101.1.2.141 alpha arrays › HTH › HTH › winged helix domain › HTH_24 0.74 66.0 5.27e-01 97.7% 65.9%
5077990 101.1.1.62 alpha arrays › HTH › HTH › Three-helical HTH › HTH_24 0.74 61.0 4.89e-01 93.2% 48.9%
4984064 101.1.1.61 alpha arrays › HTH › HTH › Three-helical HTH › HTH_AsnC-type 0.74 60.0 5.62e-01 93.2% 80.0%
5046692 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.74 62.0 6.18e-01 93.2% 91.1%
3946469 101.1.2.15 alpha arrays › HTH › HTH › winged helix domain › MarR 0.73 59.0 5.04e-01 93.2% 54.7%
4556736 101.1.2.31 alpha arrays › HTH › HTH › winged helix domain › TFIIE_alpha 0.73 60.0 5.16e-01 93.2% 58.6%
4935247 101.1.2.210 alpha arrays › HTH › HTH › winged helix domain › CggR_N 0.72 62.0 4.79e-01 97.7% 54.0%
4971941 101.1.2.141 alpha arrays › HTH › HTH › winged helix domain › HTH_24 0.72 59.0 4.99e-01 93.2% 58.7%
5047331 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.72 60.0 4.76e-01 93.2% 45.6%
4989853 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.69 55.0 4.22e-01 93.2% 44.5%
3241805 101.1.1.20 alpha arrays › HTH › HTH › Three-helical HTH › CPSF_A 0.61 50.0 4.07e-01 100.0% 88.3%