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NC_009604.1__YP_001294906.1__BcepNY3gene68__00069
Bact-VirNC_009604.1__YP_001294906.1__BcepNY3gene68__00069
Identity
- Accession:
- NC_009604 ↗
- Kingdom:
- phage
Quality
59.3
mean pLDDT
Taxonomy
TaxID: 2881397
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 179-267
Domain cluster:
rep: NC_054946.1__YP_010077738.1__KMC38_gp51__00051__D184-265
CATH (15)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2xzmV01 | 1.10.60.20 | Mainly Alpha › Orthogonal Bundle › Diphtheria Toxin Repressor; domain 2 › Ribosomal protein S17 | 0.75 | 38.0 | 4.46e-01 | 94.4% | 70.5% |
| 1e7lA02 | 1.10.720.10 | Mainly Alpha › Orthogonal Bundle › Transcription Termination Factor Rho, Rna-binding Domain; Chain A, Domain 1 › | 0.63 | 38.0 | 4.53e-01 | 92.1% | 96.4% |
| 1h0oA00 | 1.10.620.20 | Mainly Alpha › Orthogonal Bundle › Ribonucleotide Reductase, subunit A › Ribonucleotide Reductase, subunit A | 0.60 | 45.0 | 3.20e-01 | 80.9% | 58.0% |
| 2gslF00 | 1.10.1520.10 | Mainly Alpha › Orthogonal Bundle › Ribonuclease iii, N-terminal Endonuclease Domain; Chain A › Ribonuclease III domain | 0.58 | 47.0 | 4.20e-01 | 87.6% | 81.9% |
| 3lmfA00 | 1.20.1270.360 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › | 0.57 | 37.0 | 3.42e-01 | 98.9% | 53.2% |
| 3f6tA02 | 1.10.20.110 | Mainly Alpha › Orthogonal Bundle › Histone, subunit A › | 0.57 | 45.0 | 3.80e-01 | 84.3% | 95.2% |
| 3gi7A00 | 1.20.1270.180 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › | 0.57 | 40.0 | 3.85e-01 | 73.0% | 87.4% |
| 1xwjA01 | 1.20.120.230 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Alpha-catenin/vinculin-like | 0.56 | 49.0 | 4.36e-01 | 98.9% | 97.7% |
| 3u52D00 | 1.10.620.20 | Mainly Alpha › Orthogonal Bundle › Ribonucleotide Reductase, subunit A › Ribonucleotide Reductase, subunit A | 0.55 | 43.0 | 2.99e-01 | 85.4% | 54.9% |
| 3u61D03 | 1.20.272.10 | Mainly Alpha › Up-down Bundle › Zinc Finger, Delta Prime; domain 3 › | 0.55 | 44.0 | 4.44e-01 | 92.1% | 87.9% |
| 1iygA00 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.52 | 38.0 | 3.38e-01 | 77.5% | 75.9% |
| 2z4vA00 | 1.10.600.10 | Mainly Alpha › Orthogonal Bundle › Farnesyl Diphosphate Synthase › Farnesyl Diphosphate Synthase | 0.51 | 38.0 | 2.73e-01 | 82.0% | 53.5% |
| 2wy4A00 | 1.10.490.10 | Mainly Alpha › Orthogonal Bundle › Globin-like › Globins | 0.51 | 39.0 | 3.38e-01 | 80.9% | 61.2% |
| 2oifB00 | 1.10.490.10 | Mainly Alpha › Orthogonal Bundle › Globin-like › Globins | 0.51 | 41.0 | 3.39e-01 | 85.4% | 54.3% |
| 1vw4T01 | 6.10.330.20 | Special › Helix non-globular › Monooxygenase › | 0.51 | 35.0 | 3.24e-01 | 94.4% | 56.2% |
ECOD (12)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3245309 | 109.62.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › AFF4 C-terminal homology domain › AFF4 C-terminal homology domain | 0.65 | 52.0 | 3.77e-01 | 84.3% | 88.3% |
| 4561199 | 179.1.1.1 ↗ | alpha bundles › CO dehydrogenase ISP C-domain like › CO dehydrogenase ISP C-domain like › CO dehydrogenase ISP C-domain like › Fer2_2 | 0.65 | 35.0 | 3.66e-01 | 97.8% | 56.2% |
| 4014020 | 192.29.1.4 ↗ | alpha bundles › Long alpha-hairpin › bMERB domain (bivalent Mical/EHBP Rab binding) › bMERB domain (bivalent Mical/EHBP Rab binding) › Opi1 | 0.61 | 43.0 | 3.54e-01 | 75.3% | 61.2% |
| 3709603 | 5069.1.1.0 ↗ | alpha bundles › Transmembrane heme-binding four-helical bundle › Transmembrane heme-binding four-helical bundle › Transmembrane di-heme cytochromes | 0.60 | 43.0 | 3.67e-01 | 75.3% | 76.6% |
| 191174 | 141.1.1.1 ↗ | alpha bundles › Terpenoid synthases › Terpenoid synthases › Terpenoid synthases › polyprenyl_synt | 0.59 | 40.0 | 2.77e-01 | 70.8% | 20.9% |
| 5083790 | 601.7.1.0 ↗ | alpha bundles › Four-helical up-and-down bundle › HEPN › Nucleotidyltransferase substrate binding subunit/domain | 0.58 | 45.0 | 3.84e-01 | 83.1% | 100.0% |
| 3179977 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.58 | 46.0 | 2.96e-01 | 85.4% | 37.2% |
| 3768820 | 601.1.1.113 ↗ | alpha bundles › Four-helical up-and-down bundle › alpha-catenin-related › alpha-catenin/vinculin › PF29854 | 0.54 | 46.0 | 3.43e-01 | 95.5% | 72.5% |
| 3985073 | 235.1.1.9 ↗ | a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like › SLT | 0.52 | 40.0 | 3.55e-01 | 84.3% | 60.0% |
| 3886349 | 195.1.1.0 ↗ | alpha complex topology › NusB-like › NusB-like › NusB-like | 0.52 | 40.0 | 3.33e-01 | 83.1% | 95.8% |
| 4324922 | 192.7.1.0 ↗ | alpha bundles › Long alpha-hairpin › tRNA-binding arm › tRNA-binding arm | 0.51 | 36.0 | 3.68e-01 | 97.8% | 75.3% |
| 4284297 | 171.1.1.4 ↗ | alpha arrays › RNase III catalytic domain-like › RNase III catalytic domain-like › RNase III catalytic domain-like › Ribonucleas_3_3 | 0.50 | 37.0 | 3.21e-01 | 78.7% | 94.5% |