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NC_009737.2__YP_001425597.1__BV1_gp14__00017

Bact-Vir

NC_009737.2__YP_001425597.1__BV1_gp14__00017

Identity

Accession:
NC_009737 ↗
Kingdom:
phage

Quality

76.2 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Svunavirus› Bacillus_phage_1

TaxID: 2785079

Cluster

Singleton — not in a non-trivial cluster

3D Structure

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Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 64-211
PDB
Domain cluster: rep: KC237729.1__AGH27917.1__phiCP51_0026__00026__D12-130
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF13048.13 best DUF3908 40.3 4.90e-10 87.2% 96.3%
CATH (21)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2codA01 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.76 47.0 5.77e-01 71.6% 95.8%
4k17B01 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.75 54.0 6.22e-01 99.3% 100.0%
3pvlA04 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.73 46.0 5.48e-01 73.6% 93.9%
1h4rA03 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.71 44.0 5.43e-01 74.3% 98.9%
1zsqA01 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.71 48.0 5.69e-01 71.6% 100.0%
1faoA00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.69 45.0 5.43e-01 95.3% 98.0%
4tyzA00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.69 49.0 5.63e-01 96.6% 100.0%
2rgnB02 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.68 47.0 5.10e-01 74.3% 83.7%
1eazA00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.65 45.0 5.31e-01 74.3% 100.0%
1txdA02 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.65 46.0 5.06e-01 75.7% 90.1%
3ddmA01 3.30.390.10 Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain 0.64 31.0 3.34e-01 100.0% 52.8%
2coaA01 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.64 45.0 4.99e-01 71.6% 99.2%
3voqA00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.63 44.0 4.87e-01 72.3% 89.7%
2cayB00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.63 49.0 5.20e-01 81.1% 92.4%
2kieA00 2.30.29.110 Mainly Beta › Roll › PH-domain like › 0.61 49.0 5.27e-01 93.2% 100.0%
2cy5A00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.61 44.0 4.64e-01 73.0% 100.0%
1y5oA00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.59 44.0 4.89e-01 96.6% 98.3%
1x1fA00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.59 44.0 4.47e-01 86.5% 77.9%
2jobA00 3.30.160.320 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.58 31.0 3.67e-01 89.9% 74.5%
3fm2A00 3.40.1570.10 Alpha Beta › 3-Layer(aba) Sandwich › Heme iron utilization protein-like fold › HemS/ChuS/ChuX like domains 0.55 39.0 4.08e-01 72.3% 90.2%
7obmA01 2.130.10.120 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › Prolyl oligopeptidase, N-terminal domain 0.51 42.0 3.24e-01 86.5% 92.2%
ECOD (83)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3480535 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.76 48.0 5.65e-01 74.3% 89.5%
4996362 220.1.1.87 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › bPH_3 0.76 53.0 6.14e-01 93.2% 99.1%
4986577 220.1.1.87 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › bPH_3 0.75 54.0 6.23e-01 93.2% 100.0%
3810543 220.1.1.20 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_TFIIH 0.75 48.0 5.49e-01 70.3% 86.4%
3264236 220.1.1.8 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › GRAM 0.74 49.0 5.85e-01 78.4% 99.0%
3914585 220.1.1.1 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH 0.73 51.0 5.90e-01 79.1% 100.0%
3268089 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.71 53.0 5.71e-01 95.9% 89.6%
3452440 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.71 48.0 5.42e-01 72.3% 88.7%
3718868 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.71 56.0 5.73e-01 96.6% 84.1%
4034521 220.1.1.87 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › bPH_3 0.71 47.0 5.64e-01 76.4% 100.0%
3601659 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.70 58.0 5.81e-01 96.6% 86.0%
4927398 220.1.1.8 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › GRAM 0.70 54.0 5.33e-01 79.7% 89.0%
3902810 220.1.1.58 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH-GRAM_MTMR6-like 0.70 49.0 5.34e-01 72.3% 88.0%
3475799 220.1.1.7 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › IRS 0.69 45.0 4.94e-01 73.0% 78.4%
3407758 220.1.1.8 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › GRAM 0.69 51.0 5.64e-01 95.9% 96.5%
3263647 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.69 49.0 5.35e-01 77.7% 88.3%
3785687 220.1.1.58 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH-GRAM_MTMR6-like 0.69 47.0 5.35e-01 70.3% 89.6%
3782222 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.69 52.0 5.13e-01 97.3% 73.5%
5078629 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.69 46.0 5.36e-01 72.3% 92.7%
5044748 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.69 40.0 4.72e-01 87.8% 81.0%
3589473 4.8.1.0 ↗ beta barrels › SH3 › Chromo domain-like › Chromo domain-like 0.68 37.0 4.83e-01 95.9% 96.2%
3219161 220.1.1.50 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_17 0.68 46.0 5.28e-01 72.3% 91.8%
5007551 220.1.1.87 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › bPH_3 0.68 53.0 5.86e-01 100.0% 100.0%
5072273 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.68 50.0 5.51e-01 75.7% 100.0%
3744198 220.1.1.26 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › Vps36_ESCRT-II 0.68 50.0 5.51e-01 81.1% 93.3%
3705153 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.68 49.0 5.10e-01 73.6% 91.1%
3789025 220.1.1.8 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › GRAM 0.68 50.0 5.21e-01 95.9% 83.0%
3520868 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.67 58.0 5.95e-01 98.6% 96.4%
3917637 220.1.1.8 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › GRAM 0.67 50.0 5.00e-01 77.0% 75.3%
3270836 220.1.1.8 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › GRAM 0.67 48.0 5.36e-01 95.9% 93.9%
4928214 220.1.1.87 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › bPH_3 0.67 57.0 5.96e-01 95.9% 97.8%
3743890 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.67 51.0 5.19e-01 96.6% 80.7%
3262415 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.67 50.0 5.68e-01 80.4% 100.0%
3276134 220.1.1.1 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH 0.67 47.0 5.16e-01 75.0% 85.6%
3891317 220.1.1.8 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › GRAM 0.67 51.0 5.38e-01 96.6% 87.4%
3489971 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.66 47.0 5.18e-01 72.3% 95.0%
4025365 220.1.1.74 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PIG-H 0.66 47.0 5.38e-01 100.0% 99.1%
3249490 220.1.1.8 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › GRAM 0.66 48.0 5.38e-01 79.1% 95.7%
3548037 220.1.1.8 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › GRAM 0.66 50.0 5.32e-01 95.3% 88.5%
3531579 220.1.1.8 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › GRAM 0.66 51.0 5.07e-01 98.0% 77.4%
3899369 220.1.1.8 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › GRAM 0.66 51.0 5.16e-01 99.3% 80.7%
5031715 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.66 51.0 5.31e-01 91.2% 88.1%
4962251 220.1.1.87 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › bPH_3 0.66 56.0 5.86e-01 98.0% 98.5%
3743098 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.66 50.0 5.07e-01 78.4% 94.5%
3259098 220.1.1.8 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › GRAM 0.65 48.0 5.29e-01 95.9% 92.5%
5051984 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.65 47.0 5.21e-01 98.6% 92.5%
3275009 220.1.1.8 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › GRAM 0.65 52.0 5.30e-01 98.6% 86.7%
3176453 220.1.1.8 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › GRAM 0.65 50.0 5.11e-01 96.6% 83.6%
3259128 220.1.1.8 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › GRAM 0.65 48.0 5.23e-01 95.3% 91.2%
3269042 220.1.1.74 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PIG-H 0.65 48.0 5.38e-01 98.0% 99.1%
3895407 220.1.1.1 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH 0.65 47.0 4.74e-01 77.0% 75.2%
4255411 220.1.1.126 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › Ycf4 0.65 45.0 5.09e-01 74.3% 95.5%
3175878 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.65 51.0 5.03e-01 96.6% 78.7%
4144852 220.1.1.126 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › Ycf4 0.65 45.0 5.10e-01 70.9% 96.3%
3234621 220.1.1.8 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › GRAM 0.64 47.0 4.97e-01 93.2% 83.0%
3722216 220.1.1.70 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_5 0.64 48.0 4.71e-01 75.7% 89.7%
3529648 220.1.1.8 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › GRAM 0.64 51.0 5.24e-01 92.6% 87.1%
4121439 220.1.1.217 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH, GRAM 0.64 49.0 3.61e-01 95.9% 30.6%
3258602 220.1.1.1 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH 0.64 47.0 5.05e-01 75.7% 88.0%
3646080 220.1.1.8 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › GRAM 0.64 48.0 4.84e-01 77.7% 88.0%
3281007 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.64 54.0 5.45e-01 97.3% 89.3%
3265211 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.63 45.0 4.85e-01 72.3% 87.2%
4012616 220.1.1.74 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PIG-H 0.63 47.0 5.19e-01 98.0% 98.3%
3403716 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.63 45.0 4.92e-01 72.3% 99.2%
3738714 220.1.1.74 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PIG-H 0.63 45.0 5.15e-01 99.3% 100.0%
3166714 220.1.1.26 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › Vps36_ESCRT-II 0.63 49.0 4.89e-01 81.1% 86.0%
3233725 220.1.1.8 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › GRAM 0.63 51.0 5.02e-01 92.6% 80.0%
3173029 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.62 54.0 5.00e-01 93.9% 77.9%
3607882 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.62 42.0 4.84e-01 72.3% 93.6%
3190430 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.61 56.0 5.16e-01 98.6% 87.0%
4186865 220.1.1.8 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › GRAM 0.61 50.0 4.02e-01 98.6% 45.3%
3654211 220.1.1.8 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › GRAM 0.60 53.0 4.97e-01 96.6% 77.0%
3660450 220.1.1.8 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › GRAM 0.60 53.0 4.97e-01 96.6% 78.3%
4202484 220.1.1.8 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › GRAM 0.60 53.0 5.08e-01 97.3% 82.4%
3693957 220.1.1.8 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › GRAM 0.60 55.0 4.98e-01 98.0% 92.3%
3258838 220.1.1.66 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › SOS1_NGEF_PH 0.60 50.0 5.04e-01 95.3% 87.3%
3199439 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.60 54.0 4.95e-01 97.3% 90.5%
4140296 220.1.1.8 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › GRAM 0.59 52.0 5.34e-01 99.3% 100.0%
3592181 220.1.1.74 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PIG-H 0.57 47.0 4.96e-01 100.0% 97.0%
4012071 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.57 51.0 3.66e-01 95.3% 57.0%
3477246 220.1.1.66 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › SOS1_NGEF_PH 0.55 46.0 4.75e-01 95.3% 93.6%
3675857 304.9.1.0 ↗ a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD 0.53 38.0 3.49e-01 72.3% 99.5%
1169103 5.1.4.14 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Peptidase_S9_N 0.50 41.0 2.99e-01 87.8% 66.0%
D2 medium residues 3-49
PDB