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NC_009760.1__YP_001429597.1__ST0305phi8-36p107__00007
Bact-VirNC_009760.1__YP_001429597.1__ST0305phi8-36p107__00007
Identity
- Accession:
- NC_009760 ↗
- Kingdom:
- phage
Quality
81.4
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 1-95
Domain cluster:
rep: rifoxyd1_full_scaffold_5_prodigal-single.1__X__X__00039__D5-84
CATH (18)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3kxwA02 | 3.30.300.30 | Alpha Beta › 2-Layer Sandwich › GMP Synthetase; Chain A, domain 3 › ANL, C-terminal domain | 0.61 | 44.0 | 4.02e-01 | 90.5% | 57.3% |
| 4dg8A02 | 3.30.300.30 | Alpha Beta › 2-Layer Sandwich › GMP Synthetase; Chain A, domain 3 › ANL, C-terminal domain | 0.59 | 36.0 | 3.74e-01 | 90.5% | 63.0% |
| 1uwvA03 | 2.40.50.1070 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.58 | 33.0 | 2.91e-01 | 85.3% | 39.4% |
| 6o6eB02 | 3.30.300.30 | Alpha Beta › 2-Layer Sandwich › GMP Synthetase; Chain A, domain 3 › ANL, C-terminal domain | 0.58 | 40.0 | 3.92e-01 | 90.5% | 64.5% |
| 1f2uB00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.57 | 29.0 | 2.57e-01 | 74.7% | 30.3% |
| 7r7eA01 | 3.30.300.30 | Alpha Beta › 2-Layer Sandwich › GMP Synthetase; Chain A, domain 3 › ANL, C-terminal domain | 0.56 | 41.0 | 3.86e-01 | 90.5% | 62.2% |
| 2y27A02 | 3.30.300.30 | Alpha Beta › 2-Layer Sandwich › GMP Synthetase; Chain A, domain 3 › ANL, C-terminal domain | 0.56 | 41.0 | 4.00e-01 | 90.5% | 70.9% |
| 1ib8A01 | 3.30.300.70 | Alpha Beta › 2-Layer Sandwich › GMP Synthetase; Chain A, domain 3 › RimP-like superfamily, N-terminal | 0.55 | 38.0 | 4.06e-01 | 85.3% | 81.9% |
| 6n6qD00 | 1.10.630.10 | Mainly Alpha › Orthogonal Bundle › Cytochrome p450 › Cytochrome P450 | 0.54 | 40.0 | 2.66e-01 | 81.1% | 77.0% |
| 8hnzA01 | 1.10.630.10 | Mainly Alpha › Orthogonal Bundle › Cytochrome p450 › Cytochrome P450 | 0.52 | 40.0 | 2.68e-01 | 82.1% | 76.5% |
| 4alzA01 | 3.30.1340.30 | Alpha Beta › 2-Layer Sandwich › Histidine-containing Protein; Chain: A; › | 0.52 | 29.0 | 3.44e-01 | 84.2% | 82.3% |
| 4exrA02 | 3.10.450.40 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.51 | 29.0 | 3.33e-01 | 83.2% | 74.6% |
| 2gpiA00 | 3.30.160.140 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Shew3726-like | 0.51 | 37.0 | 3.78e-01 | 76.8% | 79.1% |
| 3d4eA01 | 3.30.1450.10 | Alpha Beta › 2-Layer Sandwich › Beta-lactamase Inhibitory Protein; Chain:B, domain 1 › | 0.51 | 28.0 | 3.00e-01 | 86.3% | 58.3% |
| 3bypA00 | 3.30.70.1350 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Cation efflux protein, cytoplasmic domain | 0.51 | 35.0 | 3.79e-01 | 88.4% | 82.9% |
| 2eyqA05 | 2.40.10.170 | Mainly Beta › Beta Barrel › Thrombin, subunit H › | 0.51 | 28.0 | 3.37e-01 | 71.6% | 86.4% |
| 4oo1I01 | 2.40.50.880 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.50 | 30.0 | 3.40e-01 | 76.8% | 77.3% |
| 4ifdI01 | 2.40.50.880 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.50 | 33.0 | 3.51e-01 | 76.8% | 75.6% |
ECOD (41)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3496374 | 327.18.1.0 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › 40S ribosomal protein S7-A › 40S ribosomal protein S7-A | 0.61 | 41.0 | 4.13e-01 | 96.8% | 68.4% |
| 5027442 | 327.7.1.0 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › Cation efflux protein cytoplasmic domain-like › Cation efflux protein cytoplasmic domain-like | 0.61 | 33.0 | 4.03e-01 | 82.1% | 83.3% |
| 3952151 | 327.5.1.6 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › a+b domain in acetyl-CoA synthetase-like proteins › a+b domain in acetyl-CoA synthetase-like proteins › AMP-dom_DIP2-like | 0.58 | 41.0 | 3.77e-01 | 90.5% | 56.5% |
| 3875392 | 327.5.1.6 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › a+b domain in acetyl-CoA synthetase-like proteins › a+b domain in acetyl-CoA synthetase-like proteins › AMP-dom_DIP2-like | 0.58 | 38.0 | 3.50e-01 | 90.5% | 50.8% |
| 4440700 | 327.18.1.3 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › 40S ribosomal protein S7-A › 40S ribosomal protein S7-A › DciA | 0.58 | 42.0 | 4.23e-01 | 87.4% | 75.8% |
| 5022749 | 327.1.1.0 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › Alpha-lytic protease prodomain › Alpha-lytic protease prodomain | 0.56 | 31.0 | 3.64e-01 | 83.2% | 76.9% |
| 5050086 | 327.11.1.0 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Prokaryotic type KH domain (KH-domain type II) | 0.55 | 32.0 | 3.73e-01 | 86.3% | 80.0% |
| 3956580 | 327.5.1.0 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › a+b domain in acetyl-CoA synthetase-like proteins › a+b domain in acetyl-CoA synthetase-like proteins | 0.55 | 35.0 | 3.40e-01 | 90.5% | 56.4% |
| 4021181 | 327.5.1.0 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › a+b domain in acetyl-CoA synthetase-like proteins › a+b domain in acetyl-CoA synthetase-like proteins | 0.55 | 42.0 | 3.75e-01 | 90.5% | 56.4% |
| 3439658 | 327.10.1.9 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › Ribosome-binding factor A (RbfA)-related › Ribosome-binding factor A (RbfA)-related › DnaA_N-like_STI | 0.54 | 36.0 | 4.05e-01 | 91.6% | 86.7% |
| 2106034 | 327.18.1.1 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › 40S ribosomal protein S7-A › 40S ribosomal protein S7-A › Ribosomal_S7e | 0.54 | 36.0 | 3.80e-01 | 97.9% | 78.0% |
| 5061690 | 327.7.1.1 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › Cation efflux protein cytoplasmic domain-like › Cation efflux protein cytoplasmic domain-like › ZT_dimer | 0.53 | 37.0 | 3.95e-01 | 89.5% | 83.7% |
| 3599705 | 327.7.1.0 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › Cation efflux protein cytoplasmic domain-like › Cation efflux protein cytoplasmic domain-like | 0.53 | 34.0 | 3.51e-01 | 82.1% | 67.8% |
| 4665987 | 327.4.1.0 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › YhbC-like, N-terminal domain › YhbC-like, N-terminal domain | 0.53 | 36.0 | 4.10e-01 | 83.2% | 94.3% |
| 1442348 | 327.18.1.1 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › 40S ribosomal protein S7-A › 40S ribosomal protein S7-A › Ribosomal_S7e | 0.53 | 37.0 | 3.56e-01 | 100.0% | 62.4% |
| 4446779 | 327.4.1.1 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › YhbC-like, N-terminal domain › YhbC-like, N-terminal domain › RimP_N | 0.53 | 38.0 | 3.96e-01 | 92.6% | 82.4% |
| 3828503 | 327.10.1.9 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › Ribosome-binding factor A (RbfA)-related › Ribosome-binding factor A (RbfA)-related › DnaA_N-like_STI | 0.52 | 34.0 | 3.69e-01 | 88.4% | 80.0% |
| 4975328 | 327.7.1.1 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › Cation efflux protein cytoplasmic domain-like › Cation efflux protein cytoplasmic domain-like › ZT_dimer | 0.52 | 35.0 | 3.86e-01 | 84.2% | 86.7% |
| 3209178 | 1143.1.1.0 ↗ | beta sandwiches › beta sandwich domain in acetophenone carboxylase (Apc) alpha subunit › beta sandwich domain in acetophenone carboxylase (Apc) alpha subunit › beta sandwich domain in acetophenone carboxylase (Apc) alpha subunit | 0.52 | 33.0 | 3.70e-01 | 85.3% | 85.7% |
| 5073102 | 327.7.1.1 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › Cation efflux protein cytoplasmic domain-like › Cation efflux protein cytoplasmic domain-like › ZT_dimer | 0.52 | 35.0 | 3.66e-01 | 87.4% | 76.5% |
| 3958269 | 3261.1.1.0 ↗ | a+b two layers › amino-terminal domain of OmpATb › amino-terminal domain of OmpATb › amino-terminal domain of OmpATb | 0.52 | 30.0 | 3.59e-01 | 85.3% | 90.0% |
| 3401966 | 2.1.1.350 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › PF30298 | 0.51 | 38.0 | 3.12e-01 | 78.9% | 52.8% |
| 4990292 | 327.11.1.1 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Prokaryotic type KH domain (KH-domain type II) › KH_2 | 0.51 | 33.0 | 3.58e-01 | 84.2% | 77.5% |
| 2038407 | 327.7.1.1 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › Cation efflux protein cytoplasmic domain-like › Cation efflux protein cytoplasmic domain-like › ZT_dimer | 0.51 | 35.0 | 3.76e-01 | 87.4% | 79.8% |
| 5038961 | 327.7.1.1 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › Cation efflux protein cytoplasmic domain-like › Cation efflux protein cytoplasmic domain-like › ZT_dimer | 0.51 | 36.0 | 3.97e-01 | 86.3% | 92.0% |
| 5034796 | 327.7.1.1 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › Cation efflux protein cytoplasmic domain-like › Cation efflux protein cytoplasmic domain-like › ZT_dimer | 0.51 | 35.0 | 3.55e-01 | 88.4% | 70.5% |
| 3735941 | 327.7.1.0 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › Cation efflux protein cytoplasmic domain-like › Cation efflux protein cytoplasmic domain-like | 0.51 | 37.0 | 3.88e-01 | 91.6% | 84.7% |
| 3781412 | 327.5.1.0 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › a+b domain in acetyl-CoA synthetase-like proteins › a+b domain in acetyl-CoA synthetase-like proteins | 0.51 | 41.0 | 3.66e-01 | 91.6% | 77.9% |
| 5028639 | 327.11.1.1 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Prokaryotic type KH domain (KH-domain type II) › KH_2 | 0.51 | 35.0 | 3.75e-01 | 90.5% | 85.0% |
| 4656066 | 327.11.1.1 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Prokaryotic type KH domain (KH-domain type II) › KH_2 | 0.51 | 34.0 | 3.56e-01 | 87.4% | 74.4% |
| 3729965 | 327.5.1.0 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › a+b domain in acetyl-CoA synthetase-like proteins › a+b domain in acetyl-CoA synthetase-like proteins | 0.51 | 39.0 | 3.53e-01 | 90.5% | 57.9% |
| 5069119 | 327.11.1.1 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Prokaryotic type KH domain (KH-domain type II) › KH_2 | 0.51 | 34.0 | 3.59e-01 | 86.3% | 77.6% |
| 5072458 | 327.7.1.1 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › Cation efflux protein cytoplasmic domain-like › Cation efflux protein cytoplasmic domain-like › ZT_dimer | 0.51 | 32.0 | 3.64e-01 | 87.4% | 87.1% |
| 5071431 | 327.7.1.1 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › Cation efflux protein cytoplasmic domain-like › Cation efflux protein cytoplasmic domain-like › ZT_dimer | 0.51 | 34.0 | 3.75e-01 | 85.3% | 86.7% |
| 4943019 | 327.11.1.0 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Prokaryotic type KH domain (KH-domain type II) | 0.50 | 34.0 | 3.85e-01 | 83.2% | 94.3% |
| 4956194 | 327.11.1.1 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Prokaryotic type KH domain (KH-domain type II) › KH_2 | 0.50 | 34.0 | 3.67e-01 | 85.3% | 82.5% |
| 3530470 | 232.1.1.3 ↗ | a+b duplicates or obligate multimers › Pentein › Pentein › Pentein › PAD | 0.50 | 42.0 | 2.85e-01 | 94.7% | 55.6% |
| 5037058 | 327.11.1.1 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Prokaryotic type KH domain (KH-domain type II) › KH_2 | 0.50 | 34.0 | 3.68e-01 | 89.5% | 82.5% |
| 3477384 | 327.5.1.0 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › a+b domain in acetyl-CoA synthetase-like proteins › a+b domain in acetyl-CoA synthetase-like proteins | 0.50 | 35.0 | 2.34e-01 | 73.7% | 68.5% |
| 3994433 | 327.5.1.0 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › a+b domain in acetyl-CoA synthetase-like proteins › a+b domain in acetyl-CoA synthetase-like proteins | 0.50 | 32.0 | 3.29e-01 | 91.6% | 67.8% |
| 5038098 | 327.11.1.1 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Prokaryotic type KH domain (KH-domain type II) › KH_2 | 0.50 | 35.0 | 3.59e-01 | 89.5% | 76.7% |
D2
medium
residues 96-181
Domain cluster:
representative
CATH (48)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1fpoC02 | 1.20.1280.20 | Mainly Alpha › Up-down Bundle › Monooxygenase › HscB, C-terminal domain | 0.75 | 51.0 | 5.07e-01 | 70.9% | 90.1% |
| 8sbeA02 | 1.20.1250.20 | Mainly Alpha › Up-down Bundle › Growth Hormone; Chain: A; › MFS general substrate transporter like domains | 0.70 | 48.0 | 3.73e-01 | 70.9% | 43.3% |
| 5jajA03 | 1.20.1320.30 | Mainly Alpha › Up-down Bundle › phosphoenolpyruvate carboxylase, domain 3 › | 0.69 | 49.0 | 4.32e-01 | 79.1% | 53.4% |
| 2lseA00 | 1.20.120.1360 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › | 0.64 | 41.0 | 3.93e-01 | 93.0% | 54.5% |
| 8fbnB01 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.64 | 53.0 | 3.89e-01 | 89.5% | 53.2% |
| 3ro3A00 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.62 | 51.0 | 4.06e-01 | 86.0% | 55.3% |
| 2fjcB00 | 1.20.1260.10 | Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle | 0.61 | 53.0 | 4.26e-01 | 91.9% | 85.9% |
| 3r2kA00 | 1.20.1260.10 | Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle | 0.61 | 52.0 | 4.26e-01 | 91.9% | 81.2% |
| 3iq1B00 | 1.20.1260.10 | Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle | 0.61 | 52.0 | 4.21e-01 | 91.9% | 83.6% |
| 4ip8A00 | 1.10.132.110 | Mainly Alpha › Orthogonal Bundle › Topoisomerase I; Chain A, domain 4 › Serum amyloid A protein | 0.61 | 51.0 | 4.85e-01 | 97.7% | 79.0% |
| 2c41C01 | 1.20.1260.10 | Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle | 0.60 | 51.0 | 4.22e-01 | 90.7% | 87.9% |
| 1nfvA00 | 1.20.1260.10 | Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle | 0.60 | 52.0 | 4.09e-01 | 91.9% | 74.0% |
| 2chpA00 | 1.20.1260.10 | Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle | 0.60 | 52.0 | 4.25e-01 | 91.9% | 89.9% |
| 2gs4A00 | 1.20.1260.10 | Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle | 0.60 | 54.0 | 4.31e-01 | 95.3% | 89.2% |
| 2qqyA00 | 1.20.1260.10 | Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle | 0.60 | 54.0 | 4.51e-01 | 95.3% | 92.0% |
| 2katA00 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.60 | 49.0 | 4.40e-01 | 86.0% | 72.2% |
| 3ma5A00 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.60 | 48.0 | 4.75e-01 | 84.9% | 90.0% |
| 1s3qG00 | 1.20.1260.10 | Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle | 0.59 | 51.0 | 4.08e-01 | 91.9% | 77.3% |
| 1zs3A00 | 1.20.1260.10 | Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle | 0.59 | 53.0 | 4.14e-01 | 95.3% | 79.5% |
| 4cmyA00 | 1.20.1260.10 | Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle | 0.59 | 51.0 | 4.05e-01 | 91.9% | 77.3% |
| 5xe7A01 | 1.20.140.160 | Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › PhyR, sigma-like (SL) domain | 0.59 | 49.0 | 4.18e-01 | 91.9% | 78.9% |
| 2vxxA00 | 1.20.1260.10 | Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle | 0.59 | 52.0 | 4.09e-01 | 95.3% | 79.7% |
| 4kf8B00 | 1.25.10.70 | Mainly Alpha › Alpha Horseshoe › Leucine-rich Repeat Variant › | 0.58 | 50.0 | 3.51e-01 | 91.9% | 34.5% |
| 1sqgA01 | 1.10.940.10 | Mainly Alpha › Orthogonal Bundle › N-utilizing Substance Protein B Homolog; Chain A › NusB-like | 0.58 | 50.0 | 4.24e-01 | 94.2% | 65.2% |
| 1q16C01 | 1.20.950.20 | Mainly Alpha › Up-down Bundle › Fumarate Reductase Cytochrome B subunit › Transmembrane di-heme cytochromes, Chain C | 0.58 | 51.0 | 3.78e-01 | 95.3% | 43.9% |
| 4yvoA00 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.58 | 49.0 | 4.33e-01 | 98.8% | 64.7% |
| 2xgjA03 | 1.10.3380.30 | Mainly Alpha › Orthogonal Bundle › Sec63 N-terminal domain-like fold › | 0.58 | 52.0 | 3.83e-01 | 97.7% | 100.0% |
| 4f91B04 | 1.10.3380.10 | Mainly Alpha › Orthogonal Bundle › Sec63 N-terminal domain-like fold › Sec63 N-terminal domain-like domain | 0.57 | 52.0 | 4.33e-01 | 97.7% | 91.5% |
| 2l6jA00 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.57 | 45.0 | 4.14e-01 | 83.7% | 67.6% |
| 4i9cA02 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.57 | 53.0 | 3.85e-01 | 100.0% | 49.3% |
| 4p9fA02 | 1.20.120.530 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › GntR ligand-binding domain-like | 0.56 | 42.0 | 3.60e-01 | 80.2% | 56.9% |
| 2kbwA01 | 1.10.437.10 | Mainly Alpha › Orthogonal Bundle › Apoptosis Regulator Bcl-x › Blc2-like | 0.56 | 49.0 | 4.11e-01 | 100.0% | 55.6% |
| 2v5cA03 | 1.20.58.460 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Hyaluronidase post-catalytic domain-like | 0.56 | 47.0 | 4.09e-01 | 100.0% | 60.0% |
| 5a0uA01 | 3.20.70.20 | Alpha Beta › Alpha-Beta Barrel › Anaerobic Ribonucleotide-triphosphate Reductase Large Chain › | 0.56 | 48.0 | 2.84e-01 | 98.8% | 19.6% |
| 8b70A01 | 1.20.1740.10 | Mainly Alpha › Up-down Bundle › Amino acid/polyamine transporter I › Amino acid/polyamine transporter I | 0.56 | 51.0 | 3.23e-01 | 100.0% | 76.8% |
| 4hzdB01 | 1.10.3130.10 | Mainly Alpha › Orthogonal Bundle › serine acetyltransferase, domain 1 › serine acetyltransferase, domain 1 | 0.56 | 49.0 | 4.18e-01 | 95.3% | 99.3% |
| 6vxcA01 | 3.20.70.20 | Alpha Beta › Alpha-Beta Barrel › Anaerobic Ribonucleotide-triphosphate Reductase Large Chain › | 0.55 | 48.0 | 2.84e-01 | 98.8% | 62.5% |
| 1t3dA01 | 1.10.3130.10 | Mainly Alpha › Orthogonal Bundle › serine acetyltransferase, domain 1 › serine acetyltransferase, domain 1 | 0.55 | 48.0 | 4.09e-01 | 95.3% | 97.9% |
| 8alzB08 | 1.10.3380.10 | Mainly Alpha › Orthogonal Bundle › Sec63 N-terminal domain-like fold › Sec63 N-terminal domain-like domain | 0.55 | 48.0 | 4.18e-01 | 95.3% | 99.2% |
| 5xtck00 | 1.10.287.3510 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.55 | 40.0 | 3.92e-01 | 100.0% | 70.1% |
| 1s35A02 | 1.20.58.60 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.54 | 46.0 | 4.20e-01 | 90.7% | 80.9% |
| 3agtA00 | 1.20.120.50 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Hemerythrin-like | 0.53 | 44.0 | 3.76e-01 | 94.2% | 57.1% |
| 1iygA00 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.53 | 38.0 | 3.35e-01 | 87.2% | 49.6% |
| 2nwbA02 | 1.20.58.480 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.53 | 45.0 | 3.36e-01 | 97.7% | 84.4% |
| 6xpdA01 | 1.20.1510.10 | Mainly Alpha › Up-down Bundle › Alpha-lytic protease prodomain-like › Cation efflux protein transmembrane domain | 0.53 | 44.0 | 3.43e-01 | 95.3% | 71.8% |
| 3vayA02 | 1.20.120.1600 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › | 0.51 | 37.0 | 3.71e-01 | 76.7% | 81.6% |
| 7ymiD01 | 1.20.85.10 | Mainly Alpha › Up-down Bundle › Photosynthetic Reaction Center, subunit M; domain 1 › Photosystem II protein D1-like | 0.51 | 46.0 | 3.60e-01 | 100.0% | 73.9% |
| 2a2cA03 | 1.20.1440.340 | Mainly Alpha › Up-down Bundle › de novo design (two linked rop proteins) › | 0.50 | 46.0 | 3.89e-01 | 100.0% | 75.4% |
ECOD (44)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3177558 | 3922.1.1.0 ↗ | alpha bundles › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 | 0.77 | 54.0 | 4.98e-01 | 70.9% | 98.1% |
| 3972200 | 6155.2.1.1 ↗ | alpha duplicates or obligate multimers › TOG superfamily › PnuC › PnuC › NMN_transporter | 0.76 | 54.0 | 4.13e-01 | 73.3% | 97.3% |
| 3406362 | 109.4.1.777 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.75 | 53.0 | 3.52e-01 | 72.1% | 91.9% |
| 4606564 | 6155.2.1.1 ↗ | alpha duplicates or obligate multimers › TOG superfamily › PnuC › PnuC › NMN_transporter | 0.75 | 51.0 | 3.92e-01 | 70.9% | 94.2% |
| 2649515 | 5050.1.1.9 ↗ | alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › MFS_1 | 0.72 | 49.0 | 3.79e-01 | 70.9% | 73.3% |
| 3615004 | 5050.1.1.0 ↗ | alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter | 0.69 | 48.0 | 3.56e-01 | 72.1% | 34.7% |
| 3783372 | 109.4.1.891 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › HEAT_HEATR1 | 0.68 | 59.0 | 4.22e-01 | 98.8% | 33.1% |
| 3222717 | 109.4.1.626 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TRAPPC9-Trs120 | 0.67 | 53.0 | 3.74e-01 | 83.7% | 97.2% |
| 2870914 | 2500.1.1.3 ↗ | a/b barrels › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › PFL-like | 0.66 | 58.0 | 3.45e-01 | 100.0% | 45.2% |
| 3370346 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.64 | 52.0 | 3.38e-01 | 84.9% | 27.8% |
| 5050125 | 109.4.1.198 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_12 | 0.64 | 49.0 | 4.18e-01 | 81.4% | 65.2% |
| 3606475 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.63 | 49.0 | 4.34e-01 | 82.6% | 74.2% |
| 4932747 | 109.4.1.198 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_12 | 0.61 | 52.0 | 4.93e-01 | 89.5% | 93.0% |
| 3591317 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.61 | 50.0 | 3.69e-01 | 87.2% | 45.3% |
| 5050102 | 109.4.1.198 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_12 | 0.61 | 50.0 | 3.85e-01 | 86.0% | 49.4% |
| 5047702 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.60 | 55.0 | 3.89e-01 | 98.8% | 43.7% |
| 3282788 | 109.4.1.194 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_10 | 0.60 | 48.0 | 3.85e-01 | 84.9% | 56.4% |
| 3575213 | 109.4.1.649 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › DUF4807 | 0.60 | 50.0 | 4.22e-01 | 88.4% | 59.3% |
| 3486898 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.60 | 48.0 | 3.37e-01 | 84.9% | 33.5% |
| 3755359 | 109.4.1.198 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_12 | 0.60 | 49.0 | 3.74e-01 | 86.0% | 47.6% |
| 4881789 | 109.3.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat | 0.60 | 51.0 | 5.10e-01 | 90.7% | 89.7% |
| 169780 | 109.4.1.210 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_19 | 0.59 | 49.0 | 4.49e-01 | 86.0% | 75.7% |
| 3213455 | 109.4.1.139 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Hyccin | 0.59 | 49.0 | 3.30e-01 | 89.5% | 74.4% |
| 3615720 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.59 | 49.0 | 3.75e-01 | 89.5% | 51.1% |
| 3288806 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.58 | 47.0 | 3.85e-01 | 86.0% | 58.2% |
| 3182549 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.58 | 51.0 | 3.19e-01 | 95.3% | 37.3% |
| 3579643 | 109.7.1.6 ↗ | alpha superhelices › Repetitive alpha hairpins › Cytochrome c oxidase subunit E › Cytochrome c oxidase subunit E › TRAPPC9-Trs120 | 0.58 | 49.0 | 4.38e-01 | 89.5% | 87.0% |
| 3733029 | 4156.1.1.3 ↗ | alpha arrays › Sec63 N-terminal subdomain-like › Sec63 N-terminal subdomain-like › Sec63 N-terminal subdomain-like › DSHCT | 0.58 | 52.0 | 4.06e-01 | 97.7% | 88.6% |
| 3175863 | 109.4.1.1764 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PF28917 | 0.57 | 52.0 | 3.72e-01 | 98.8% | 67.2% |
| 3461190 | 185.1.1.1 ↗ | alpha superhelices › Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin-like › Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin/Protein HNS-dependent expression A HdeA › Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin › Tryp_alpha_amyl | 0.57 | 48.0 | 4.59e-01 | 94.2% | 93.0% |
| 2529967 | 2500.1.1.3 ↗ | a/b barrels › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › PFL-like | 0.57 | 46.0 | 2.80e-01 | 96.5% | 24.1% |
| 3255250 | 109.24.1.1 ↗ | alpha superhelices › Repetitive alpha hairpins › Helical domain in dedicator of cytokinesis protein 9 › Helical domain in dedicator of cytokinesis protein 9 › DHR-2_Lobe_A | 0.57 | 53.0 | 4.20e-01 | 100.0% | 71.2% |
| 3923704 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.56 | 47.0 | 3.32e-01 | 89.5% | 35.6% |
| 3656677 | 109.4.1.1434 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TRAPPC9-Trs120, PF26251 | 0.56 | 50.0 | 3.34e-01 | 97.7% | 39.4% |
| 3483220 | 109.24.1.1 ↗ | alpha superhelices › Repetitive alpha hairpins › Helical domain in dedicator of cytokinesis protein 9 › Helical domain in dedicator of cytokinesis protein 9 › DHR-2_Lobe_A | 0.55 | 49.0 | 3.73e-01 | 96.5% | 74.9% |
| 5025907 | 109.4.1.194 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_10 | 0.55 | 50.0 | 3.78e-01 | 98.8% | 47.2% |
| 3744793 | 5076.1.1.1 ↗ | alpha complex topology › Mitochondrial ADP/ATP carrier-like › Mitochondrial ADP/ATP carrier › Mitochondrial ADP/ATP carrier › Mito_carr | 0.55 | 49.0 | 3.34e-01 | 98.8% | 74.8% |
| 3233751 | 5050.1.1.9 ↗ | alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › MFS_1 | 0.54 | 40.0 | 3.04e-01 | 79.1% | 79.1% |
| 3699104 | 109.4.1.209 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Katanin_con80 | 0.54 | 42.0 | 3.62e-01 | 86.0% | 73.1% |
| 3613716 | 5050.1.1.23 ↗ | alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › CLN3 | 0.54 | 38.0 | 2.96e-01 | 74.4% | 45.9% |
| 3263672 | 109.24.1.1 ↗ | alpha superhelices › Repetitive alpha hairpins › Helical domain in dedicator of cytokinesis protein 9 › Helical domain in dedicator of cytokinesis protein 9 › DHR-2_Lobe_A | 0.53 | 49.0 | 3.97e-01 | 98.8% | 72.9% |
| 3263445 | 109.24.1.1 ↗ | alpha superhelices › Repetitive alpha hairpins › Helical domain in dedicator of cytokinesis protein 9 › Helical domain in dedicator of cytokinesis protein 9 › DHR-2_Lobe_A | 0.53 | 48.0 | 3.85e-01 | 100.0% | 72.1% |
| 3245538 | 604.1.1.0 ↗ | alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat | 0.52 | 43.0 | 4.04e-01 | 90.7% | 84.8% |
| 3879191 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.51 | 39.0 | 3.42e-01 | 95.3% | 53.8% |