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NC_009810.1__YP_001468432.1__LiPA500_gp46__00046
Bact-VirNC_009810.1__YP_001468432.1__LiPA500_gp46__00046
Identity
- Accession:
- NC_009810 ↗
- Kingdom:
- phage
Quality
82.2
mean pLDDT
Taxonomy
TaxID: 40522
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 9-96
Domain cluster:
representative
CATH (11)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1wh2A01 | 3.30.1490.40 | Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › GYF domain | 0.66 | 42.0 | 4.87e-01 | 70.5% | 95.1% |
| 2d4zA00 | 3.10.580.10 | Alpha Beta › Roll › CBS-domain › CBS-domain | 0.62 | 48.0 | 3.85e-01 | 81.8% | 61.5% |
| 3aqoA02 | 3.30.1360.200 | Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › | 0.60 | 49.0 | 4.17e-01 | 88.6% | 86.5% |
| 3jtfA01 | 3.90.1280.20 | Alpha Beta › Alpha-Beta Complex › CBS domain Like › | 0.59 | 38.0 | 4.43e-01 | 70.5% | 95.1% |
| 2pfiB01 | 3.10.580.10 | Alpha Beta › Roll › CBS-domain › CBS-domain | 0.58 | 45.0 | 3.90e-01 | 84.1% | 55.8% |
| 3fhmA00 | 3.10.580.10 | Alpha Beta › Roll › CBS-domain › CBS-domain | 0.53 | 39.0 | 3.50e-01 | 85.2% | 52.2% |
| 6liuC02 | 3.90.1150.10 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 | 0.53 | 39.0 | 3.52e-01 | 76.1% | 88.8% |
| 4hasA00 | 3.30.1520.10 | Alpha Beta › 2-Layer Sandwich › PX Domain › Phox-like domain | 0.53 | 44.0 | 4.16e-01 | 88.6% | 97.1% |
| 4dzoA02 | 3.30.457.60 | Alpha Beta › 2-Layer Sandwich › Copper Amine Oxidase; Chain A, domain 1 › | 0.52 | 36.0 | 3.85e-01 | 92.0% | 83.1% |
| 4e1oA03 | 3.90.1150.10 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 | 0.50 | 37.0 | 3.63e-01 | 78.4% | 100.0% |
| 2z1cB00 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.50 | 36.0 | 3.85e-01 | 75.0% | 94.6% |
ECOD (24)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3323055 | 822.1.1.0 ↗ | a+b two layers › GYF/BRK domain-like › GYF domain › GYF domain | 0.68 | 47.0 | 5.27e-01 | 81.8% | 96.9% |
| 5035493 | 192.2.1.1 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin_2 | 0.64 | 36.0 | 3.37e-01 | 100.0% | 45.7% |
| 4382937 | 1.1.5.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel | 0.61 | 50.0 | 3.41e-01 | 88.6% | 40.7% |
| 3227231 | 822.1.1.1 ↗ | a+b two layers › GYF/BRK domain-like › GYF domain › GYF domain › GYF | 0.61 | 40.0 | 4.51e-01 | 77.3% | 93.7% |
| 4345301 | 1.1.5.44 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › SecDF_P1_head | 0.61 | 49.0 | 4.06e-01 | 88.6% | 88.7% |
| 3839674 | 1.1.5.44 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › SecDF_P1_head | 0.61 | 49.0 | 4.23e-01 | 88.6% | 85.7% |
| 4590943 | 1.1.5.44 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › SecDF_P1_head | 0.60 | 49.0 | 4.01e-01 | 88.6% | 88.1% |
| 4652858 | 1.1.5.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel | 0.60 | 51.0 | 3.64e-01 | 93.2% | 65.5% |
| 1760080 | 1.1.5.44 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › SecDF_P1_head | 0.60 | 48.0 | 4.05e-01 | 88.6% | 80.3% |
| 4677734 | 1.1.5.44 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › SecDF_P1_head | 0.59 | 48.0 | 4.10e-01 | 88.6% | 86.2% |
| 4100501 | 1.1.5.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel | 0.59 | 48.0 | 3.25e-01 | 89.8% | 50.1% |
| 3394225 | 192.2.1.1 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin_2 | 0.58 | 36.0 | 3.29e-01 | 94.3% | 47.8% |
| 3953438 | 1.1.5.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel | 0.58 | 48.0 | 3.46e-01 | 90.9% | 60.8% |
| 4233827 | 1.1.5.44 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › SecDF_P1_head | 0.58 | 47.0 | 3.97e-01 | 89.8% | 90.7% |
| 4974678 | 282.1.1.1 ↗ | a+b duplicates or obligate multimers › CBS-domain › CBS-domain › CBS-domain › CBS | 0.57 | 40.0 | 3.67e-01 | 84.1% | 53.3% |
| 4648737 | 1.1.5.44 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › SecDF_P1_head | 0.57 | 47.0 | 4.07e-01 | 90.9% | 87.9% |
| 3493963 | 192.2.1.1 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin_2 | 0.57 | 35.0 | 3.40e-01 | 94.3% | 54.0% |
| 4224443 | 1.1.5.44 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › SecDF_P1_head | 0.57 | 46.0 | 3.85e-01 | 90.9% | 91.3% |
| 4942800 | 282.1.1.1 ↗ | a+b duplicates or obligate multimers › CBS-domain › CBS-domain › CBS-domain › CBS | 0.57 | 40.0 | 3.72e-01 | 85.2% | 55.8% |
| 3458208 | 282.1.1.1 ↗ | a+b duplicates or obligate multimers › CBS-domain › CBS-domain › CBS-domain › CBS | 0.56 | 41.0 | 3.33e-01 | 84.1% | 38.9% |
| 3931290 | 3016.1.1.0 ↗ | a+b two layers › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases | 0.53 | 40.0 | 3.65e-01 | 79.5% | 86.4% |
| 5060418 | 192.2.1.2 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin | 0.52 | 33.0 | 3.02e-01 | 94.3% | 47.5% |
| 5078024 | 282.1.1.1 ↗ | a+b duplicates or obligate multimers › CBS-domain › CBS-domain › CBS-domain › CBS | 0.51 | 41.0 | 3.65e-01 | 92.0% | 62.9% |
| 4981405 | 2485.1.1.1 ↗ | a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like › Thioredoxin | 0.51 | 36.0 | 3.20e-01 | 73.9% | 83.1% |