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NC_009813.1__YP_001468730.1__LiPB054_gp26__00026
Bact-VirNC_009813.1__YP_001468730.1__LiPB054_gp26__00026
Identity
- Accession:
- NC_009813 ↗
- Kingdom:
- phage
Quality
91.7
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 123-241
Domain cluster:
rep: NC_031125.1__YP_009292659.1__BIZ66_gp19__00019__D922-1038
D2
medium
residues 77-119
Domain cluster:
rep: AY766464.1__AAX13237.1__X__00053__D61-103
CATH (3)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3h37A02 | 1.10.110.30 | Mainly Alpha › Orthogonal Bundle › Hydrophobic Seed Protein › | 0.69 | 46.0 | 3.78e-01 | 72.1% | 52.3% |
| 3q91B00 | 3.90.79.10 | Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › Nucleoside Triphosphate Pyrophosphohydrolase | 0.59 | 42.0 | 3.01e-01 | 76.7% | 78.6% |
| 6ysiH01 | 3.100.10.10 | Alpha Beta › Ribosomal Protein L15; Chain: K; domain 2 › Ribosomal Protein L15; Chain: K; domain 2 › | 0.54 | 45.0 | 3.90e-01 | 100.0% | 97.3% |
ECOD (3)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2417914 | 1083.1.1.0 ↗ | a+b duplicates or obligate multimers › Phage T4 gp12 N-terminal repeating units › Phage T4 gp12 N-terminal repeating units › Phage T4 gp12 N-terminal repeating units | 0.77 | 67.0 | 4.59e-01 | 100.0% | 42.0% |
| 4888789 | 1083.1.1.1 ↗ | a+b duplicates or obligate multimers › Phage T4 gp12 N-terminal repeating units › Phage T4 gp12 N-terminal repeating units › Phage T4 gp12 N-terminal repeating units › gp12-short_mid | 0.72 | 58.0 | 3.56e-01 | 95.3% | 16.7% |
| 3975357 | 1083.1.1.3 ↗ | a+b duplicates or obligate multimers › Phage T4 gp12 N-terminal repeating units › Phage T4 gp12 N-terminal repeating units › Phage T4 gp12 N-terminal repeating units › Phage_fiber_2 | 0.63 | 49.0 | 5.07e-01 | 100.0% | 100.0% |