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NC_009813.1__YP_001468730.1__LiPB054_gp26__00026

Bact-Vir

NC_009813.1__YP_001468730.1__LiPB054_gp26__00026

Identity

Accession:
NC_009813 ↗
Kingdom:
phage

Quality

91.7 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 123-241
PDB
D2 medium residues 77-119
PDB
CATH (3)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3h37A02 1.10.110.30 Mainly Alpha › Orthogonal Bundle › Hydrophobic Seed Protein › 0.69 46.0 3.78e-01 72.1% 52.3%
3q91B00 3.90.79.10 Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › Nucleoside Triphosphate Pyrophosphohydrolase 0.59 42.0 3.01e-01 76.7% 78.6%
6ysiH01 3.100.10.10 Alpha Beta › Ribosomal Protein L15; Chain: K; domain 2 › Ribosomal Protein L15; Chain: K; domain 2 › 0.54 45.0 3.90e-01 100.0% 97.3%
ECOD (3)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
2417914 1083.1.1.0 a+b duplicates or obligate multimers › Phage T4 gp12 N-terminal repeating units › Phage T4 gp12 N-terminal repeating units › Phage T4 gp12 N-terminal repeating units 0.77 67.0 4.59e-01 100.0% 42.0%
4888789 1083.1.1.1 a+b duplicates or obligate multimers › Phage T4 gp12 N-terminal repeating units › Phage T4 gp12 N-terminal repeating units › Phage T4 gp12 N-terminal repeating units › gp12-short_mid 0.72 58.0 3.56e-01 95.3% 16.7%
3975357 1083.1.1.3 a+b duplicates or obligate multimers › Phage T4 gp12 N-terminal repeating units › Phage T4 gp12 N-terminal repeating units › Phage T4 gp12 N-terminal repeating units › Phage_fiber_2 0.63 49.0 5.07e-01 100.0% 100.0%