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NC_009813.1__YP_001468770.1__LiPB054_gp66__00066
Bact-VirNC_009813.1__YP_001468770.1__LiPB054_gp66__00066
Identity
- Accession:
- NC_009813 ↗
- Kingdom:
- phage
Quality
80.4
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 3-94
Domain cluster:
representative
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF27286.1 best | YosH_C | 44.7 | 2.80e-11 | 96.7% | 98.8% |
CATH (3)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1bi0A02 | 1.10.60.10 | Mainly Alpha › Orthogonal Bundle › Diphtheria Toxin Repressor; domain 2 › Iron dependent repressor, metal binding and dimerisation domain | 0.57 | 32.0 | 3.74e-01 | 73.9% | 77.3% |
| 3qtaB00 | 3.40.1550.10 | Alpha Beta › 3-Layer(aba) Sandwich › Chemotaxis protein chec › CheC-like | 0.54 | 48.0 | 3.77e-01 | 100.0% | 62.3% |
| 1lshA03 | 2.20.50.20 | Mainly Beta › Single Sheet › Outer Surface Protein A; domain 2 › Lipovitellin. Chain A, domain 3 | 0.51 | 24.0 | 2.34e-01 | 100.0% | 40.8% |
ECOD (3)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4947436 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.53 | 28.0 | 3.53e-01 | 76.1% | 85.5% |
| 3363111 | 101.1.1.101 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › HTH_40 | 0.53 | 28.0 | 3.50e-01 | 73.9% | 81.7% |
| 3466070 | 365.1.1.1 ↗ | few secondary structure elements › Crambin-like › Crambin-like › Crambin-like › Thionin | 0.52 | 21.0 | 3.20e-01 | 80.4% | 87.5% |