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NC_009813.1__YP_001468772.1__LiPB054_gp68__00068

Bact-Vir

NC_009813.1__YP_001468772.1__LiPB054_gp68__00068

Identity

Accession:
NC_009813 ↗
Kingdom:
phage

Quality

91.6 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Listeria_phage_B054

TaxID: 330397

Cluster

Singleton — not in a non-trivial cluster

3D Structure

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Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 9-49
PDB
Domain cluster: rep: MW478291.1__QTZ82932.1__phiCPD_00050__00050__D9-49
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF21847.2 best DUF6906 63.9 1.40e-17 100.0% 82.0%
CATH (74)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1bkbA02 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.80 56.0 4.77e-01 75.6% 46.2%
4fw1A02 2.30.30.10 Mainly Beta › Roll › SH3 type barrels. › Integrase, C-terminal domain superfamily, retroviral 0.78 66.0 5.97e-01 95.1% 70.4%
1jssA00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.77 56.0 3.53e-01 78.0% 18.1%
6serA01 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.77 55.0 3.43e-01 78.0% 17.1%
1uebA02 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.77 53.0 4.58e-01 75.6% 47.6%
3f8dA02 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.75 66.0 4.69e-01 100.0% 77.2%
3cgbA01 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.75 64.0 4.23e-01 97.6% 44.0%
1ybyA02 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.74 51.0 4.43e-01 82.9% 46.9%
5xu6C01 3.30.200.110 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Inositol-pentakisphosphate 2-kinase, N-lobe 0.74 53.0 3.95e-01 78.0% 36.1%
3d5pA00 3.40.1580.10 Alpha Beta › 3-Layer(aba) Sandwich › SMI1/KNR4-like › SMI1/KNR4-like 0.74 60.0 4.17e-01 100.0% 27.8%
6l6jA02 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.74 65.0 4.51e-01 100.0% 74.3%
1mk1A00 3.90.79.10 Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › Nucleoside Triphosphate Pyrophosphohydrolase 0.74 50.0 3.20e-01 70.7% 16.6%
4c26A00 3.30.920.30 Alpha Beta › 2-Layer Sandwich › Metal Transport, Frataxin; Chain A › Hypothetical protein. 0.74 56.0 4.85e-01 90.2% 53.0%
2qcuB01 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.74 63.0 3.91e-01 97.6% 54.6%
2eifA02 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.73 50.0 4.49e-01 75.6% 50.8%
2r7dA03 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.73 50.0 4.44e-01 75.6% 50.0%
3a5zD02 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.73 50.0 4.34e-01 78.0% 46.9%
3p8aA02 2.60.40.4320 Mainly Beta › Sandwich › Immunoglobulin-like › 0.71 56.0 4.42e-01 95.1% 41.1%
3k30A03 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.71 62.0 4.32e-01 100.0% 64.7%
5i4eA01 2.30.30.360 Mainly Beta › Roll › SH3 type barrels. › Myosin S1 fragment, N-terminal 0.71 56.0 5.48e-01 95.1% 80.4%
2v5mA02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.70 60.0 4.50e-01 97.6% 71.2%
3c5iD01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.70 57.0 4.85e-01 100.0% 77.6%
1u0lA01 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.69 47.0 4.07e-01 75.6% 45.3%
1efzA00 3.20.20.105 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Queuine tRNA-ribosyltransferase-like 0.69 51.0 2.99e-01 82.9% 18.0%
1x0tA02 6.20.50.20 Special › Other non-globular › N-terminal domain of TfIIb › 0.69 49.0 4.83e-01 78.0% 95.6%
3hrpA02 2.120.10.30 Mainly Beta › 6 Propeller › Neuraminidase › TolB, C-terminal domain 0.68 56.0 3.43e-01 100.0% 19.7%
1b9mB02 2.40.50.100 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › RNA polymerase II/Efflux pump adaptor protein, barrel-sandwich hybrid domain 0.68 47.0 3.92e-01 82.9% 41.7%
4m4zA01 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.68 56.0 5.40e-01 95.1% 87.2%
3m2oA01 3.30.720.120 Alpha Beta › 2-Layer Sandwich › Signal recognition particle alu RNA binding heterodimer, srp9/1 › 0.68 55.0 5.11e-01 95.1% 71.7%
4omfB02 3.10.450.750 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.68 55.0 5.35e-01 100.0% 87.2%
5cemA01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.67 49.0 4.06e-01 95.1% 43.8%
2xkoC01 2.30.30.660 Mainly Beta › Roll › SH3 type barrels. › Protein of unknown function (DUF3539) 0.67 53.0 5.04e-01 95.1% 75.0%
7cfdA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.67 58.0 4.85e-01 100.0% 64.4%
6bogA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.67 57.0 5.31e-01 97.6% 82.7%
2cudA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.66 55.0 4.51e-01 95.1% 59.5%
3gvpA02 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.66 47.0 3.26e-01 87.8% 20.8%
1azpA00 2.40.50.40 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.66 51.0 4.46e-01 90.2% 68.2%
3oyyA01 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.66 57.0 4.88e-01 100.0% 78.8%
3ntkA02 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.65 54.0 4.46e-01 100.0% 60.0%
2ymsA00 2.40.128.630 Mainly Beta › Beta Barrel › Lipocalin › 0.64 54.0 3.91e-01 100.0% 49.2%
1xipA00 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.64 54.0 3.15e-01 100.0% 10.9%
7u32F02 2.30.30.10 Mainly Beta › Roll › SH3 type barrels. › Integrase, C-terminal domain superfamily, retroviral 0.64 53.0 5.03e-01 97.6% 84.3%
1b7tA02 2.30.30.360 Mainly Beta › Roll › SH3 type barrels. › Myosin S1 fragment, N-terminal 0.64 54.0 5.08e-01 100.0% 78.8%
4wi1A02 3.40.50.800 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Anticodon-binding domain 0.63 51.0 3.80e-01 100.0% 58.5%
4mchA00 3.40.50.1580 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Nucleoside phosphorylase domain 0.63 49.0 3.05e-01 87.8% 16.0%
1lckA01 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.63 51.0 4.65e-01 95.1% 79.7%
5ic7A00 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.63 52.0 3.13e-01 100.0% 14.4%
2hjjA00 3.30.160.130 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › ykff protein like domains 0.63 49.0 4.39e-01 95.1% 63.6%
5wbyC01 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.63 51.0 3.10e-01 100.0% 29.4%
1igqB00 2.30.30.150 Mainly Beta › Roll › SH3 type barrels. › KorB, C-terminal domain 0.62 49.0 4.45e-01 95.1% 63.2%
2grgA01 3.40.1840.10 Alpha Beta › 3-Layer(aba) Sandwich › Profilin-like › YNR034W-A-like 0.62 54.0 4.32e-01 100.0% 98.8%
2krtA01 3.10.450.270 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.62 46.0 3.59e-01 87.8% 87.4%
1zuuA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.62 50.0 4.69e-01 100.0% 89.3%
2yztA00 3.30.160.250 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.62 40.0 3.55e-01 70.7% 42.4%
2evrA01 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.61 48.0 4.16e-01 95.1% 71.6%
5xilA02 3.40.50.800 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Anticodon-binding domain 0.61 52.0 3.74e-01 100.0% 49.2%
2kr0A01 2.30.29.70 Mainly Beta › Roll › PH-domain like › Proteasomal ubiquitin receptor Rpn13/ADRM1 0.60 48.0 3.73e-01 100.0% 76.1%
3netB02 3.40.50.800 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Anticodon-binding domain 0.60 51.0 3.94e-01 100.0% 66.3%
1twfI02 2.20.25.10 Mainly Beta › Single Sheet › N-terminal domain of TfIIb › 0.60 51.0 4.16e-01 95.1% 57.9%
1khcA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.60 50.0 4.38e-01 97.6% 80.0%
4euuA01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.59 48.0 3.80e-01 92.7% 46.1%
3hdoA01 3.90.1150.10 Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 0.58 49.0 3.48e-01 100.0% 46.2%
4kfuA00 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.58 50.0 3.19e-01 100.0% 90.2%
1nj1A02 3.40.50.800 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Anticodon-binding domain 0.57 48.0 3.65e-01 100.0% 59.6%
2pn2A00 3.30.300.20 Alpha Beta › 2-Layer Sandwich › GMP Synthetase; Chain A, domain 3 › K homology (KH) domain 0.57 44.0 3.21e-01 95.1% 62.0%
4r2xD00 3.40.50.1580 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Nucleoside phosphorylase domain 0.57 44.0 2.84e-01 95.1% 15.7%
3qpbF00 3.40.50.1580 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Nucleoside phosphorylase domain 0.57 45.0 2.86e-01 95.1% 15.9%
3lzhA01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.56 43.0 3.57e-01 100.0% 44.0%
4m0hA01 2.60.120.1440 Mainly Beta › Sandwich › Jelly Rolls › 0.56 44.0 3.26e-01 100.0% 53.2%
2la7A01 2.40.128.270 Mainly Beta › Beta Barrel › Lipocalin › 0.56 44.0 3.30e-01 100.0% 99.2%
4j4hA01 3.40.50.12150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.55 44.0 3.22e-01 97.6% 57.8%
3mx7A00 2.40.128.180 Mainly Beta › Beta Barrel › Lipocalin › 0.55 45.0 3.66e-01 100.0% 73.3%
2i2lA01 2.10.70.50 Mainly Beta › Ribbon › Complement Module; domain 1 › 0.54 42.0 4.08e-01 100.0% 98.1%
3le4A00 2.20.70.10 Mainly Beta › Single Sheet › Ubiquitin Ligase Nedd4; Chain: W; › 0.54 46.0 4.22e-01 100.0% 96.4%
ECOD (86)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
5050610 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.87 59.0 4.80e-01 75.6% 41.4%
5011618 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.87 59.0 3.92e-01 70.7% 20.7%
3381974 2003.1.2.47 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › NDH2_C 0.85 59.0 3.60e-01 82.9% 13.3%
5013926 375.8.1.8 ↗ few secondary structure elements › Rubredoxin-like › Zinc-binding domain of translation initiation factor 2 beta › Zinc-binding domain of translation initiation factor 2 beta › CPxCG_zf 0.85 59.0 6.38e-01 73.2% 97.1%
4999847 4333.1.1.0 ↗ a+b complex topology › DNA methylase specificity domain › DNA methylase specificity domain › DNA methylase specificity domain 0.84 62.0 3.59e-01 82.9% 10.3%
None — 0.84 55.0 3.15e-01 70.7% 7.7%
3428809 387.1.1.0 ↗ few secondary structure elements › omega toxin-like › omega toxin-related › omega toxin-related 0.82 54.0 5.99e-01 70.7% 93.3%
5030309 375.1.1.0 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.82 57.0 6.16e-01 73.2% 97.1%
4250239 2.1.1.10 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › EFP 0.81 56.0 4.78e-01 75.6% 46.2%
4932460 2.1.1.13 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › eIF-5a 0.81 56.0 4.80e-01 75.6% 47.6%
4252940 2.1.1.10 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › EFP 0.81 54.0 4.61e-01 73.2% 44.6%
5078789 4333.1.1.8 ↗ a+b complex topology › DNA methylase specificity domain › DNA methylase specificity domain › DNA methylase specificity domain › N6_Mtase 0.81 65.0 3.51e-01 90.2% 5.9%
4100221 2.1.1.10 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › EFP 0.80 54.0 4.57e-01 73.2% 44.6%
5028956 375.8.1.0 ↗ few secondary structure elements › Rubredoxin-like › Zinc-binding domain of translation initiation factor 2 beta › Zinc-binding domain of translation initiation factor 2 beta 0.79 52.0 5.60e-01 73.2% 80.0%
5065152 4333.1.1.0 ↗ a+b complex topology › DNA methylase specificity domain › DNA methylase specificity domain › DNA methylase specificity domain 0.79 62.0 3.63e-01 90.2% 11.3%
4678731 2.1.1.10 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › EFP 0.79 54.0 4.65e-01 75.6% 46.2%
4946166 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.79 55.0 4.74e-01 75.6% 50.0%
5001065 4333.1.1.0 ↗ a+b complex topology › DNA methylase specificity domain › DNA methylase specificity domain › DNA methylase specificity domain 0.79 62.0 3.61e-01 90.2% 10.9%
4062751 2.1.1.13 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › eIF-5a 0.78 55.0 4.80e-01 75.6% 50.0%
4176687 2.1.1.10 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › EFP 0.78 54.0 4.61e-01 75.6% 46.2%
4050524 2.1.1.10 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › EFP 0.78 54.0 4.60e-01 75.6% 46.2%
5057503 2.1.1.10 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › EFP 0.78 53.0 4.66e-01 73.2% 48.3%
4184764 2.1.1.10 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › EFP 0.78 54.0 4.60e-01 75.6% 46.2%
4032291 2.1.1.10 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › EFP 0.78 53.0 4.47e-01 73.2% 44.6%
4043601 2.1.1.10 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › EFP 0.78 54.0 4.58e-01 75.6% 46.2%
4425795 2.1.1.10 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › EFP 0.77 52.0 4.44e-01 73.2% 44.6%
4352991 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.76 53.0 4.66e-01 75.6% 50.0%
4119533 2.1.1.10 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › EFP 0.76 51.0 4.49e-01 73.2% 48.3%
4433263 2.1.1.10 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › EFP 0.76 51.0 4.37e-01 75.6% 44.6%
3323471 386.1.1.4 ↗ few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › zf-BED 0.76 51.0 4.63e-01 70.7% 52.7%
5003400 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.75 55.0 4.02e-01 78.0% 31.4%
4168836 2.1.1.10 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › EFP 0.75 52.0 4.33e-01 75.6% 42.9%
3317544 2.1.1.10 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › EFP 0.74 51.0 4.39e-01 75.6% 46.2%
3982652 2003.1.2.24 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › Pyr_redox_2 0.73 63.0 4.33e-01 100.0% 69.7%
4010184 2003.1.2.1 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › Pyr_redox 0.73 63.0 4.48e-01 100.0% 80.8%
2834165 3740.1.1.1 ↗ alpha arrays › F420-reducing hydrogenase subunit beta › F420-reducing hydrogenase subunit beta › F420-reducing hydrogenase subunit beta › FrhB_FdhB_N,FrhB_FdhB_C 0.73 59.0 3.62e-01 100.0% 14.6%
1558818 2.1.1.120 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Dis32-like_C 0.73 51.0 5.32e-01 75.6% 83.8%
3616382 243.3.1.0 ↗ a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin 0.73 61.0 5.43e-01 100.0% 66.7%
3948516 2.1.1.10 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › EFP 0.72 50.0 4.29e-01 75.6% 46.2%
4932368 2005.1.1.17 ↗ a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › tRNA-synt_1f 0.72 60.0 3.64e-01 100.0% 14.7%
3354326 386.1.1.4 ↗ few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › zf-BED 0.72 52.0 4.63e-01 90.2% 53.3%
3368566 2003.1.2.0 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain 0.72 62.0 3.66e-01 100.0% 30.3%
3784757 2003.1.2.0 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain 0.72 62.0 3.48e-01 100.0% 19.6%
3514010 5.1.4.218 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Beta-prop_IFT80_2nd 0.71 61.0 3.71e-01 100.0% 26.3%
4981763 375.1.1.0 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.71 54.0 5.49e-01 82.9% 92.5%
3283015 211.1.1.1 ↗ a+b two layers › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase 0.70 56.0 4.04e-01 95.1% 30.8%
3249307 2003.1.2.5 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › FMO-like 0.70 62.0 3.91e-01 100.0% 79.0%
None — 0.70 60.0 3.44e-01 100.0% 49.3%
5009210 4042.1.1.3 ↗ a+b complex topology › barrel domain in beta subunit of DNA dependent RNA-polymerase › barrel domain in beta subunit of DNA dependent RNA-polymerase › barrel domain in beta subunit of DNA dependent RNA-polymerase › RNA_pol_Rpb2_5 0.70 59.0 3.87e-01 100.0% 25.6%
4675029 4042.1.1.2 ↗ a+b complex topology › barrel domain in beta subunit of DNA dependent RNA-polymerase › barrel domain in beta subunit of DNA dependent RNA-polymerase › barrel domain in beta subunit of DNA dependent RNA-polymerase › RNA_pol_Rpb2_6,RNA_pol_Rpb2_5 0.70 59.0 3.87e-01 100.0% 25.6%
3896519 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.69 57.0 5.41e-01 95.1% 94.0%
4865244 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.69 50.0 4.35e-01 78.0% 79.4%
3243842 375.1.1.0 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.69 51.0 3.76e-01 80.5% 41.8%
3597793 5094.1.1.0 ↗ a+b duplicates or obligate multimers › OmpH-like › OmpH-like › OmpH-like 0.69 55.0 3.83e-01 100.0% 27.4%
5072324 101.1.2.70 ↗ alpha arrays › HTH › HTH › winged helix domain › PqqD 0.69 48.0 3.72e-01 75.6% 32.6%
3581611 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.69 48.0 4.63e-01 78.0% 62.0%
4952887 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.69 59.0 5.36e-01 100.0% 72.7%
3819067 386.1.1.207 ↗ few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › zf-BED_2 0.69 49.0 4.25e-01 90.2% 49.2%
None — 0.68 55.0 2.97e-01 95.1% 4.3%
2137571 206.1.1.74 ↗ a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase, PK_Tyr_Ser-Thr 0.68 51.0 3.55e-01 100.0% 24.6%
3618504 386.1.1.4 ↗ few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › zf-BED 0.68 47.0 4.18e-01 82.9% 50.0%
1140051 4.1.1.1 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_1 0.68 56.0 5.34e-01 95.1% 83.7%
4187924 2003.1.2.24 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › Pyr_redox_2 0.68 55.0 4.11e-01 100.0% 75.8%
3914746 4.1.1.128 ↗ beta barrels › SH3 › SH3 › SH3 › Tudor_4 0.67 58.0 4.84e-01 97.6% 62.9%
4958343 101.1.2.70 ↗ alpha arrays › HTH › HTH › winged helix domain › PqqD 0.67 47.0 3.70e-01 75.6% 34.4%
3462190 3561.1.1.0 ↗ a+b complex topology › Mediator of RNA polymerase II transcription subunit 17 › Mediator of RNA polymerase II transcription subunit 17 › Mediator of RNA polymerase II transcription subunit 17 0.67 50.0 2.96e-01 100.0% 10.0%
3584345 375.1.1.26 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › Rpr2 0.67 48.0 3.41e-01 80.5% 36.3%
5033075 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.65 56.0 5.08e-01 100.0% 72.7%
4998697 375.1.1.0 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.65 47.0 4.23e-01 80.5% 66.7%
4990951 3535.1.1.0 ↗ a+b two layers › Sex pheromone staph-cAM373 › Sex pheromone staph-cAM373 › Sex pheromone staph-cAM373 0.64 52.0 3.75e-01 100.0% 58.5%
3822364 3270.1.1.1 ↗ a+b two layers › a+b domain in heme oxygenase › a+b domain in heme oxygenase › a+b domain in heme oxygenase › DUF2470 0.63 51.0 4.27e-01 100.0% 50.6%
5025079 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.63 54.0 4.92e-01 97.6% 72.7%
3330227 3270.1.1.0 ↗ a+b two layers › a+b domain in heme oxygenase › a+b domain in heme oxygenase › a+b domain in heme oxygenase 0.63 51.0 4.17e-01 100.0% 47.8%
4946886 375.1.1.0 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.63 51.0 4.90e-01 97.6% 78.0%
3413352 4996.1.1.3 ↗ alpha arrays › DNA-binding domain of EIN3-like › DNA-binding domain of EIN3-like › DNA-binding domain of EIN3-like › Nrf1_DNA-bind 0.62 51.0 3.76e-01 100.0% 96.1%
4928595 101.1.11.0 ↗ alpha arrays › HTH › HTH › Ribbon-helix-helix 0.61 47.0 3.56e-01 100.0% 34.3%
3425088 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.61 43.0 3.79e-01 78.0% 72.3%
3969749 708.1.2.6 ↗ beta complex topology › ETN0001 domain-like › ETN0001 domain-like › Mss4-like › GFA 0.61 47.0 3.37e-01 87.8% 36.8%
3992209 386.1.1.0 ↗ few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers 0.60 44.0 4.30e-01 100.0% 73.3%
3443169 4099.1.1.0 ↗ a+b two layers › Kinetochore globular domain-like › Kinetochore globular domain-like › Kinetochore globular domain-like 0.59 48.0 3.26e-01 97.6% 24.7%
3970700 708.1.2.0 ↗ beta complex topology › ETN0001 domain-like › ETN0001 domain-like › Mss4-like 0.59 45.0 3.27e-01 87.8% 35.9%
3926998 376.1.1.0 ↗ few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box 0.59 46.0 3.82e-01 90.2% 50.0%
3258369 375.1.1.0 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.59 46.0 4.73e-01 95.1% 97.4%
4195916 6129.1.1.1 ↗ beta barrels › Repulsive guidance molecule (RGM) family › Repulsive guidance molecule (RGM) family › Repulsive guidance molecule (RGM) family › VWD 0.56 41.0 3.07e-01 85.4% 40.8%
1140448 2003.1.5.81 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_25 0.52 44.0 2.82e-01 100.0% 44.6%
3803938 319.1.1.0 ↗ beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones 0.51 40.0 3.46e-01 97.6% 53.3%