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NC_010392.1__YP_001700626.1__STM2621.1n.Gifsy1__00041

Bact-Vir

NC_010392.1__YP_001700626.1__STM2621.1n.Gifsy1__00041

Identity

Accession:
NC_010392 ↗
Kingdom:
phage

Quality

82.7 mean pLDDT

Taxonomy

TaxID: 129861

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 2-72
PDB
Domain cluster: representative
CATH (5)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2qmlA00 3.40.630.30 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) 0.53 38.0 2.88e-01 78.9% 65.8%
1iicA02 3.40.630.30 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) 0.51 36.0 2.54e-01 74.6% 44.4%
2df7A02 2.60.120.660 Mainly Beta › Sandwich › Jelly Rolls › icosahedral virus 0.51 39.0 3.13e-01 81.7% 87.1%
5is8A02 2.70.160.11 Mainly Beta › Distorted Sandwich › Hnrnp arginine n-methyltransferase1 › Hnrnp arginine n-methyltransferase1 0.51 39.0 2.92e-01 84.5% 59.3%
4hpqB00 2.60.270.60 Mainly Beta › Sandwich › Mutm (Fpg) Protein; Chain: A, domain 2 › Autophagy-related protein 31 0.51 36.0 3.15e-01 76.1% 68.7%
ECOD (5)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3620047 5.1.4.377 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Beta-prop_WDR35_TULP_N 0.60 43.0 2.88e-01 77.5% 38.0%
5047489 844.1.1.0 beta barrels › Transcriptional factor tubby, C-terminal domain › Transcriptional factor tubby, C-terminal domain › Transcriptional factor tubby, C-terminal domain 0.55 40.0 2.92e-01 77.5% 48.3%
5081796 633.23.1.0 alpha bundles › Bromodomain-like › Claudin › Claudin 0.51 38.0 2.91e-01 80.3% 36.5%
3175567 3541.1.1.1 beta sandwiches › Atg29-Atg31 › Atg29-Atg31 › Atg29-Atg31 › ATG31 0.51 36.0 3.21e-01 76.1% 72.2%
1182807 3541.1.1.1 beta sandwiches › Atg29-Atg31 › Atg29-Atg31 › Atg29-Atg31 › ATG31 0.51 36.0 3.14e-01 76.1% 68.7%