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NC_010393.1__YP_001700670.1__STM1028.1n.Gifsy2__00027
Bact-VirNC_010393.1__YP_001700670.1__STM1028.1n.Gifsy2__00027
Identity
- Accession:
- NC_010393 ↗
- Kingdom:
- phage
Quality
86.1
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 58-223
Domain cluster:
representative
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF07108.16 best | PipA | 363.5 | 3.60e-109 | 100.0% | 83.0% |
CATH (2)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 8bypX01 | 3.90.1240.10 | Alpha Beta › Alpha-Beta Complex › Zincin-like › "Metalloproteases (""zincins""), catalytic domain like" | 0.67 | 61.0 | 4.56e-01 | 98.8% | 77.6% |
| 2i53A01 | 1.10.472.10 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like | 0.52 | 38.0 | 4.02e-01 | 92.2% | 85.3% |
ECOD (4)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2439582 | 2498.1.1.33 ↗ | mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" › PipA | 1.00 | 96.0 | 8.88e-01 | 100.0% | 81.4% |
| 4832296 | 2498.1.1.44 ↗ | mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" › Peptidase_M85 | 0.65 | 61.0 | 5.38e-01 | 100.0% | 76.3% |
| 3181181 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.55 | 30.0 | 3.57e-01 | 98.2% | 77.3% |
| 4014770 | 101.1.1.320 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › PF26805 | 0.51 | 28.0 | 3.29e-01 | 78.3% | 75.7% |