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NC_010583.1__YP_001837039.1__AGC_0116__00116

Bact-Vir

NC_010583.1__YP_001837039.1__AGC_0116__00116

Identity

Accession:
NC_010583 ↗
Kingdom:
phage

Quality

78.8 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 10-67
PDB
Domain cluster: representative
CATH (2)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4ci1B03 1.20.58.1480 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.57 32.0 3.10e-01 100.0% 44.9%
4xt1A00 1.20.1070.10 Mainly Alpha › Up-down Bundle › Rhopdopsin 7-helix transmembrane proteins › Rhodopsin 7-helix transmembrane proteins 0.52 43.0 2.83e-01 100.0% 59.1%
ECOD (4)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
1246943 2003.1.4.5 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › DHS-like NAD/FAD-binding domain › SIR2 0.71 58.0 4.64e-01 98.3% 44.4%
4256933 109.10.1.0 alpha superhelices › Repetitive alpha hairpins › Translin › Translin 0.53 42.0 2.87e-01 89.7% 23.1%
4374254 140.1.1.8 alpha bundles › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › tRNA-synt_1g,Anticodon_3 0.53 45.0 3.01e-01 100.0% 44.0%
3642639 3922.1.1.269 alpha bundles › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 › Rad50_zn_hook 0.51 42.0 3.46e-01 91.4% 89.5%