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NC_011039.1__YP_002003400.1__PREDATR_42__00042
Bact-VirNC_011039.1__YP_002003400.1__PREDATR_42__00042
Identity
- Accession:
- NC_011039 ↗
- Kingdom:
- phage
Quality
56.2
mean pLDDT
Taxonomy
TaxID: 543153
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 54-138
D2
medium
residues 204-297
Domain cluster:
rep: KR063281.1__AKJ72637.1__GMA2_99__00099__D168-254
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF19474.5 best | DUF6011 | 40.1 | 2.80e-10 | 39.4% | 97.3% |
CATH (9)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1z4vA00 | 2.120.10.10 | Mainly Beta › 6 Propeller › Neuraminidase › | 0.59 | 45.0 | 2.98e-01 | 83.0% | 89.0% |
| 2x45A00 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.57 | 41.0 | 3.55e-01 | 75.5% | 86.8% |
| 1y7bA01 | 2.115.10.20 | Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 | 0.54 | 45.0 | 3.17e-01 | 93.6% | 90.2% |
| 5jozA01 | 2.115.10.20 | Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 | 0.53 | 44.0 | 3.16e-01 | 93.6% | 89.8% |
| 6bogA02 | 2.30.30.930 | Mainly Beta › Roll › SH3 type barrels. › | 0.52 | 33.0 | 3.81e-01 | 90.4% | 100.0% |
| 1ib8A02 | 2.30.30.180 | Mainly Beta › Roll › SH3 type barrels. › Ribosome maturation factor RimP, C-terminal domain | 0.52 | 31.0 | 3.45e-01 | 100.0% | 80.6% |
| 3cqnB00 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.50 | 37.0 | 3.17e-01 | 78.7% | 87.0% |
| 1ei5A03 | 2.40.128.50 | Mainly Beta › Beta Barrel › Lipocalin › | 0.50 | 40.0 | 3.93e-01 | 100.0% | 79.4% |
| 4c5eC02 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.50 | 37.0 | 3.77e-01 | 100.0% | 79.2% |
ECOD (2)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4989812 | 802.1.1.0 ↗ | a+b two layers › Hypothetical protein TM0160 › Hypothetical protein TM0160 › Hypothetical protein TM0160 | 0.57 | 34.0 | 4.17e-01 | 85.1% | 95.0% |
| 3512071 | 1.1.17.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin | 0.51 | 44.0 | 3.12e-01 | 98.9% | 61.8% |