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NC_011043.1__YP_002003799.1__ASC_0011__00011

Bact-Vir

NC_011043.1__YP_002003799.1__ASC_0011__00011

Identity

Accession:
NC_011043 ↗
Kingdom:
phage

Quality

82.8 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 3-55
PDB
CATH (7)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2zcxA00 1.10.357.10 Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 0.57 47.0 3.28e-01 100.0% 26.8%
2xq0A03 1.10.390.10 Mainly Alpha › Orthogonal Bundle › Neutral Protease; domain 2 › Neutral Protease Domain 2 0.57 47.0 3.47e-01 100.0% 75.8%
1ji8A02 1.10.10.370 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › DsrC protein, C-terminal domain 0.56 42.0 4.12e-01 90.6% 87.5%
4fgoA00 3.10.620.30 Alpha Beta › Roll › C8orf32 fold › 0.56 45.0 3.27e-01 100.0% 58.0%
3s93A00 3.30.420.610 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › LOTUS domain-like 0.53 45.0 4.04e-01 100.0% 77.5%
2ii2A02 1.10.220.10 Mainly Alpha › Orthogonal Bundle › Annexin V; domain 1 › Annexin 0.51 41.0 3.99e-01 88.7% 93.1%
1dnyA00 1.10.1200.10 Mainly Alpha › Orthogonal Bundle › Non-ribosomal Peptide Synthetase Peptidyl Carrier Protein; Chain A › ACP-like 0.51 42.0 3.86e-01 100.0% 85.5%
ECOD (4)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3496715 109.4.1.298 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › VPS15-like_hel 0.60 52.0 2.96e-01 100.0% 8.8%
3940731 5054.1.1.8 alpha complex topology › Voltage-gated ion channels › Voltage-gated ion channels › Voltage-gated ion channels › Ion_trans_2 0.58 45.0 2.72e-01 84.9% 72.3%
3310989 109.4.1.359 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Exo70_C 0.50 40.0 2.65e-01 90.6% 53.6%
3056058 108.1.1.0 alpha arrays › EF-hand › EF-hand-related › EF-hand 0.50 40.0 3.62e-01 94.3% 62.0%
D2 high residues 89-154
PDB
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF11753.14 best DUF3310 76.7 1.60e-21 90.9% 93.3%