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NC_011167.1__YP_002154340.1__IEBH_gp15__00015
Bact-VirNC_011167.1__YP_002154340.1__IEBH_gp15__00015
Identity
- Accession:
- NC_011167 ↗
- Kingdom:
- phage
Quality
87.7
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 61-124
Domain cluster:
rep: X01458.1__CAA25690.1__X__00001__D18-79
CATH (7)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4h63K00 | 1.10.287.3490 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.73 | 29.0 | 2.50e-01 | 76.6% | 24.5% |
| 3c9pA00 | 1.10.8.290 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › uncharacterized protein sp1917 domain | 0.61 | 44.0 | 3.60e-01 | 76.6% | 84.4% |
| 2oyhA00 | 1.20.5.50 | Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › | 0.58 | 30.0 | 3.08e-01 | 87.5% | 48.4% |
| 2l3nA00 | 1.10.1050.20 | Mainly Alpha › Orthogonal Bundle › Ribosomal Protein S4 Delta 41; Chain A, domain 1 › | 0.57 | 42.0 | 3.67e-01 | 85.9% | 50.0% |
| 1qusA01 | 1.10.8.350 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Bacterial muramidase | 0.57 | 40.0 | 3.42e-01 | 75.0% | 72.6% |
| 5cbgA00 | 1.10.287.70 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.54 | 38.0 | 3.21e-01 | 73.4% | 68.6% |
| 3otdA00 | 3.30.70.3000 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › tRNA(His) guanylyltransferase (Thg1) | 0.53 | 43.0 | 2.96e-01 | 93.8% | 62.5% |
ECOD (4)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4147304 | 103.5.1.2 ↗ | alpha arrays › RuvA-C › post-HMGL domain-like › post-HMGL domain-like › DmpG_comm | 0.67 | 49.0 | 5.03e-01 | 78.1% | 95.0% |
| 4061265 | 101.1.1.3 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Myb_DNA-binding | 0.58 | 50.0 | 3.82e-01 | 100.0% | 86.9% |
| 5069039 | 3877.1.1.0 ↗ | alpha bundles › Membrane protein insertase YidC-related › Membrane protein insertase YidC-related › Membrane protein insertase YidC | 0.53 | 35.0 | 2.76e-01 | 100.0% | 30.8% |
| 4053952 | 3681.1.1.0 ↗ | a+b complex topology › Helical hairpin insertion in E. coli DNA-directed RNA polymerase beta subunit › Helical hairpin insertion in E. coli DNA-directed RNA polymerase beta subunit › Helical hairpin insertion in E. coli DNA-directed RNA polymerase beta subunit | 0.51 | 38.0 | 3.25e-01 | 85.9% | 48.6% |