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NC_011273.1__YP_002225100.1__MYRNA_223__00182
Bact-VirNC_011273.1__YP_002225100.1__MYRNA_223__00182
Identity
- Accession:
- NC_011273 ↗
- Kingdom:
- phage
Quality
82.9
mean pLDDT
Taxonomy
TaxID: 546805
Cluster
View cluster (4 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 40-90
Domain cluster:
representative
CATH (44)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1yllC02 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.65 | 46.0 | 3.76e-01 | 100.0% | 36.7% |
| 2oa2A01 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.64 | 48.0 | 3.82e-01 | 100.0% | 36.4% |
| 4ohvA01 | 2.60.120.1030 | Mainly Beta › Sandwich › Jelly Rolls › Clp1, DNA binding domain | 0.64 | 55.0 | 4.79e-01 | 100.0% | 67.5% |
| 2opkB01 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.61 | 44.0 | 3.72e-01 | 100.0% | 43.6% |
| 4qmaA02 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.61 | 51.0 | 3.83e-01 | 100.0% | 40.6% |
| 4h4nA00 | 2.60.40.3750 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.59 | 51.0 | 4.84e-01 | 100.0% | 85.5% |
| 2im9A02 | 2.30.260.10 | Mainly Beta › Roll › putative xylanase like fold › putative xylanase like domain | 0.59 | 50.0 | 3.69e-01 | 100.0% | 62.6% |
| 5fq0A00 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.58 | 48.0 | 3.92e-01 | 100.0% | 53.6% |
| 3u6xS00 | 2.60.40.3320 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.58 | 48.0 | 3.97e-01 | 100.0% | 85.7% |
| 4n5uA00 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.58 | 47.0 | 3.89e-01 | 100.0% | 58.3% |
| 2zyrA02 | 2.60.40.2190 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.58 | 50.0 | 4.14e-01 | 100.0% | 62.8% |
| 2hdeA01 | 3.10.20.550 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › ASAP complex, SAP18 subunit | 0.57 | 49.0 | 3.76e-01 | 100.0% | 54.5% |
| 4h7lB00 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.57 | 47.0 | 3.76e-01 | 100.0% | 51.3% |
| 2vqaA02 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.57 | 47.0 | 3.35e-01 | 100.0% | 37.3% |
| 4liqE05 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.57 | 48.0 | 3.96e-01 | 100.0% | 71.0% |
| 4gioA00 | 2.60.40.3230 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.56 | 45.0 | 3.87e-01 | 100.0% | 66.7% |
| 7alkA01 | 2.60.40.3510 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.56 | 48.0 | 3.43e-01 | 100.0% | 62.5% |
| 5a3lA00 | 2.60.120.1560 | Mainly Beta › Sandwich › Jelly Rolls › | 0.56 | 44.0 | 3.12e-01 | 100.0% | 47.4% |
| 4ag4A02 | 2.60.120.1190 | Mainly Beta › Sandwich › Jelly Rolls › | 0.56 | 44.0 | 3.22e-01 | 100.0% | 38.7% |
| 1yhpA01 | 2.60.20.10 | Mainly Beta › Sandwich › Gamma-B Crystallin; domain 1 › Crystallins | 0.55 | 46.0 | 3.89e-01 | 100.0% | 54.3% |
| 1v70A00 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.55 | 41.0 | 3.43e-01 | 88.2% | 68.6% |
| 1y7xA02 | 2.30.30.550 | Mainly Beta › Roll › SH3 type barrels. › Major Vault Protein repeat | 0.55 | 43.0 | 4.26e-01 | 96.1% | 89.3% |
| 4e2gC00 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.55 | 45.0 | 3.51e-01 | 100.0% | 47.6% |
| 1rocA00 | 2.60.40.1490 | Mainly Beta › Sandwich › Immunoglobulin-like › Histone chaperone ASF1-like | 0.54 | 45.0 | 3.34e-01 | 100.0% | 62.6% |
| 2zuoA06 | 2.30.30.560 | Mainly Beta › Roll › SH3 type barrels. › Major vault protein, N-terminal structural repeat domain | 0.54 | 44.0 | 4.50e-01 | 100.0% | 100.0% |
| 3n6yA01 | 2.60.40.2390 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.54 | 43.0 | 3.53e-01 | 98.0% | 67.0% |
| 4kkpA02 | 2.60.40.3880 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.54 | 44.0 | 3.57e-01 | 100.0% | 61.1% |
| 4jklA01 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.54 | 45.0 | 3.13e-01 | 100.0% | 27.4% |
| 2okxA02 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.54 | 45.0 | 3.24e-01 | 100.0% | 35.9% |
| 4ypjA02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.54 | 43.0 | 3.48e-01 | 100.0% | 84.0% |
| 5by5A00 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.53 | 42.0 | 3.48e-01 | 100.0% | 52.2% |
| 3winE03 | 2.60.120.1090 | Mainly Beta › Sandwich › Jelly Rolls › | 0.53 | 44.0 | 3.57e-01 | 100.0% | 78.2% |
| 7ze1A01 | 2.60.40.1520 | Mainly Beta › Sandwich › Immunoglobulin-like › Hemocyanin, C-terminal domain | 0.53 | 44.0 | 3.00e-01 | 100.0% | 70.5% |
| 2jz4A01 | 2.100.10.30 | Mainly Beta › Aligned Prism › Vitelline Membrane Outer Layer Protein I, subunit A › Jacalin-like lectin domain | 0.53 | 39.0 | 2.89e-01 | 90.2% | 29.1% |
| 1hcyA03 | 2.60.40.1520 | Mainly Beta › Sandwich › Immunoglobulin-like › Hemocyanin, C-terminal domain | 0.52 | 41.0 | 2.94e-01 | 100.0% | 65.2% |
| 2zuoA01 | 2.30.30.570 | Mainly Beta › Roll › SH3 type barrels. › | 0.52 | 41.0 | 4.09e-01 | 100.0% | 89.3% |
| 2n99A00 | 2.10.60.10 | Mainly Beta › Ribbon › CD59 › CD59 | 0.52 | 40.0 | 3.63e-01 | 90.2% | 60.5% |
| 1k12A00 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.51 | 41.0 | 3.06e-01 | 98.0% | 44.3% |
| 2kzbA00 | 2.60.40.2830 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.51 | 42.0 | 3.39e-01 | 100.0% | 64.9% |
| 3vvvA00 | 2.60.40.2840 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.51 | 44.0 | 3.51e-01 | 100.0% | 61.1% |
| 1qhoA04 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.51 | 43.0 | 3.47e-01 | 100.0% | 63.0% |
| 3k4zA01 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.51 | 41.0 | 3.05e-01 | 100.0% | 42.0% |
| 2muoA00 | 2.10.60.10 | Mainly Beta › Ribbon › CD59 › CD59 | 0.51 | 38.0 | 3.44e-01 | 90.2% | 58.5% |
| 1f94A00 | 2.10.60.10 | Mainly Beta › Ribbon › CD59 › CD59 | 0.51 | 36.0 | 3.42e-01 | 78.4% | 96.8% |
ECOD (42)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3252771 | 821.1.1.0 ↗ | a+b three layers › GIY-YIG endonuclease › GIY-YIG endonuclease › GIY-YIG endonuclease | 0.63 | 51.0 | 4.36e-01 | 90.2% | 64.7% |
| 5009359 | 10.1.2.0 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) | 0.63 | 46.0 | 3.75e-01 | 100.0% | 39.1% |
| 3242376 | 10.4.1.0 ↗ | beta sandwiches › jelly-roll › Spermadhesin, CUB domain › Spermadhesin, CUB domain | 0.61 | 52.0 | 3.95e-01 | 100.0% | 71.5% |
| 3381245 | 11.2.1.42 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain › DUF7651 | 0.60 | 45.0 | 3.35e-01 | 86.3% | 99.3% |
| 5045979 | 862.1.1.1 ↗ | a+b complex topology › Prim-pol domain › Prim-pol domain › Prim-pol domain › DNA_primase_S | 0.59 | 45.0 | 2.96e-01 | 90.2% | 29.6% |
| 5036166 | 12.1.1.0 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain | 0.59 | 52.0 | 4.42e-01 | 100.0% | 75.3% |
| 5067539 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.59 | 51.0 | 3.97e-01 | 100.0% | 76.5% |
| 4019428 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.59 | 49.0 | 4.08e-01 | 100.0% | 70.0% |
| 3857307 | 382.1.1.1 ↗ | few secondary structure elements › Snake toxin-like › Snake toxin-like › Snake toxin-like › UPAR_LY6 | 0.58 | 48.0 | 3.92e-01 | 92.2% | 49.5% |
| 3598703 | 10.32.1.0 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like | 0.57 | 49.0 | 3.63e-01 | 100.0% | 44.1% |
| 3334892 | 11.2.1.42 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain › DUF7651 | 0.57 | 45.0 | 3.18e-01 | 90.2% | 95.6% |
| 3936535 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.57 | 49.0 | 3.96e-01 | 100.0% | 76.2% |
| 1758438 | 11.1.1.179 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Ig_3 | 0.57 | 48.0 | 3.90e-01 | 100.0% | 67.6% |
| 5043348 | 10.1.2.0 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) | 0.56 | 49.0 | 3.43e-01 | 100.0% | 44.7% |
| 3600188 | 3529.1.1.0 ↗ | beta sandwiches › Major vault protein (MVP) structural repeat domain › Major vault protein (MVP) structural repeat domain › Major vault protein (MVP) structural repeat domain | 0.56 | 48.0 | 4.72e-01 | 100.0% | 92.7% |
| 4933169 | 10.34.1.0 ↗ | beta sandwiches › jelly-roll › Protein CLP1 jelly-roll domain › Protein CLP1 jelly-roll domain | 0.56 | 45.0 | 4.22e-01 | 98.0% | 97.1% |
| 3592726 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.56 | 47.0 | 3.74e-01 | 100.0% | 65.2% |
| 5043943 | 11.1.1.531 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › DUF11 | 0.56 | 45.0 | 3.47e-01 | 100.0% | 49.3% |
| 4328196 | 11.1.4.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like | 0.56 | 45.0 | 3.98e-01 | 100.0% | 60.0% |
| 3605089 | 3529.1.1.1 ↗ | beta sandwiches › Major vault protein (MVP) structural repeat domain › Major vault protein (MVP) structural repeat domain › Major vault protein (MVP) structural repeat domain › Vault | 0.56 | 46.0 | 4.43e-01 | 100.0% | 96.7% |
| 3922399 | 11.1.1.2 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › fn3 | 0.56 | 47.0 | 3.63e-01 | 100.0% | 54.4% |
| 4395737 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.55 | 45.0 | 3.94e-01 | 100.0% | 58.8% |
| 3573045 | 11.1.1.17 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Transglut_C | 0.55 | 46.0 | 3.60e-01 | 100.0% | 72.8% |
| 3240947 | 11.1.1.9 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Arrestin_N | 0.55 | 44.0 | 3.32e-01 | 100.0% | 58.7% |
| 405110 | 11.1.4.15 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like › Mfa2 | 0.55 | 43.0 | 3.28e-01 | 100.0% | 51.0% |
| 292719 | 3529.1.1.1 ↗ | beta sandwiches › Major vault protein (MVP) structural repeat domain › Major vault protein (MVP) structural repeat domain › Major vault protein (MVP) structural repeat domain › Vault | 0.55 | 43.0 | 4.25e-01 | 96.1% | 87.7% |
| 2866716 | 11.1.1.17 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Transglut_C | 0.54 | 44.0 | 3.57e-01 | 100.0% | 66.7% |
| 4949769 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.54 | 45.0 | 3.69e-01 | 100.0% | 73.3% |
| 3593797 | 3529.1.1.0 ↗ | beta sandwiches › Major vault protein (MVP) structural repeat domain › Major vault protein (MVP) structural repeat domain › Major vault protein (MVP) structural repeat domain | 0.53 | 44.0 | 4.33e-01 | 100.0% | 94.5% |
| 3606398 | 3529.1.1.1 ↗ | beta sandwiches › Major vault protein (MVP) structural repeat domain › Major vault protein (MVP) structural repeat domain › Major vault protein (MVP) structural repeat domain › Vault | 0.53 | 44.0 | 4.38e-01 | 100.0% | 94.5% |
| 3714918 | 3529.1.1.1 ↗ | beta sandwiches › Major vault protein (MVP) structural repeat domain › Major vault protein (MVP) structural repeat domain › Major vault protein (MVP) structural repeat domain › Vault | 0.53 | 43.0 | 4.24e-01 | 100.0% | 94.5% |
| 3705484 | 3529.1.1.1 ↗ | beta sandwiches › Major vault protein (MVP) structural repeat domain › Major vault protein (MVP) structural repeat domain › Major vault protein (MVP) structural repeat domain › Vault | 0.53 | 43.0 | 4.24e-01 | 100.0% | 94.5% |
| 3714898 | 3529.1.1.0 ↗ | beta sandwiches › Major vault protein (MVP) structural repeat domain › Major vault protein (MVP) structural repeat domain › Major vault protein (MVP) structural repeat domain | 0.53 | 43.0 | 4.18e-01 | 100.0% | 96.7% |
| 5047633 | 10.1.2.183 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) › PPC | 0.52 | 42.0 | 3.53e-01 | 100.0% | 50.5% |
| 4969051 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.52 | 41.0 | 3.35e-01 | 100.0% | 69.2% |
| 3553176 | 11.1.1.805 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Ig_PDGFR_d4 | 0.52 | 41.0 | 3.17e-01 | 100.0% | 49.0% |
| 3909507 | 11.1.1.232 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › SKICH | 0.52 | 45.0 | 3.49e-01 | 100.0% | 70.4% |
| 3413442 | 382.1.1.0 ↗ | few secondary structure elements › Snake toxin-like › Snake toxin-like › Snake toxin-like | 0.52 | 39.0 | 3.48e-01 | 92.2% | 54.1% |
| 4002070 | 11.1.1.102 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › A2M_BRD | 0.51 | 40.0 | 2.58e-01 | 100.0% | 21.1% |
| 3266009 | 3529.1.1.1 ↗ | beta sandwiches › Major vault protein (MVP) structural repeat domain › Major vault protein (MVP) structural repeat domain › Major vault protein (MVP) structural repeat domain › Vault | 0.51 | 41.0 | 4.07e-01 | 100.0% | 96.4% |
| 3758040 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.51 | 39.0 | 3.28e-01 | 100.0% | 68.3% |
| 3595897 | 3529.1.1.0 ↗ | beta sandwiches › Major vault protein (MVP) structural repeat domain › Major vault protein (MVP) structural repeat domain › Major vault protein (MVP) structural repeat domain | 0.51 | 40.0 | 4.02e-01 | 100.0% | 96.4% |
D2
high
residues 95-266
Domain cluster:
representative
CATH (14)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1winA01 | 3.30.479.30 | Alpha Beta › 2-Layer Sandwich › Tetrahydropterin Synthase; Chain A › Band 7 domain | 0.81 | 52.0 | 6.29e-01 | 100.0% | 94.9% |
| 2zuoA10 | 3.30.479.30 | Alpha Beta › 2-Layer Sandwich › Tetrahydropterin Synthase; Chain A › Band 7 domain | 0.74 | 48.0 | 5.80e-01 | 100.0% | 98.2% |
| 4uqfA02 | 3.30.1130.10 | Alpha Beta › 2-Layer Sandwich › GTP Cyclohydrolase I, domain 2 › GTP cyclohydrolase I, C-terminal domain/NADPH-dependent 7-cyano-7-deazaguanine reductase, N-terminal domain | 0.70 | 36.0 | 4.02e-01 | 100.0% | 61.9% |
| 8evkA01 | 3.30.1130.10 | Alpha Beta › 2-Layer Sandwich › GTP Cyclohydrolase I, domain 2 › GTP cyclohydrolase I, C-terminal domain/NADPH-dependent 7-cyano-7-deazaguanine reductase, N-terminal domain | 0.69 | 39.0 | 4.74e-01 | 100.0% | 86.1% |
| 1a8rA02 | 3.30.1130.10 | Alpha Beta › 2-Layer Sandwich › GTP Cyclohydrolase I, domain 2 › GTP cyclohydrolase I, C-terminal domain/NADPH-dependent 7-cyano-7-deazaguanine reductase, N-terminal domain | 0.67 | 34.0 | 3.82e-01 | 100.0% | 60.3% |
| 1nbuA00 | 3.30.1130.10 | Alpha Beta › 2-Layer Sandwich › GTP Cyclohydrolase I, domain 2 › GTP cyclohydrolase I, C-terminal domain/NADPH-dependent 7-cyano-7-deazaguanine reductase, N-terminal domain | 0.65 | 38.0 | 4.53e-01 | 100.0% | 83.9% |
| 1b9lA00 | 3.30.1130.10 | Alpha Beta › 2-Layer Sandwich › GTP Cyclohydrolase I, domain 2 › GTP cyclohydrolase I, C-terminal domain/NADPH-dependent 7-cyano-7-deazaguanine reductase, N-terminal domain | 0.64 | 38.0 | 4.42e-01 | 100.0% | 82.4% |
| 2dj6B00 | 3.30.479.10 | Alpha Beta › 2-Layer Sandwich › Tetrahydropterin Synthase; Chain A › 6-pyruvoyl tetrahydropterin synthase/QueD | 0.60 | 37.0 | 4.40e-01 | 99.4% | 90.4% |
| 1darA04 | 3.30.230.10 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S5; domain 2 › | 0.57 | 31.0 | 3.60e-01 | 100.0% | 73.1% |
| 1wleA02 | 3.30.930.10 | Alpha Beta › 2-Layer Sandwich › BirA Bifunctional Protein; domain 2 › Bira Bifunctional Protein; Domain 2 | 0.53 | 37.0 | 3.10e-01 | 72.7% | 80.8% |
| 4k7rA02 | 2.20.200.10 | Mainly Beta › Single Sheet › Outer membrane efflux proteins (OEP) › Outer membrane efflux proteins (OEP) | 0.52 | 19.0 | 2.71e-01 | 100.0% | 66.2% |
| 4q2cA01 | 1.10.3210.30 | Mainly Alpha › Orthogonal Bundle › Hypothetical protein af1432 › | 0.51 | 37.0 | 3.23e-01 | 73.3% | 93.9% |
| 4p2iA00 | 3.30.1520.10 | Alpha Beta › 2-Layer Sandwich › PX Domain › Phox-like domain | 0.50 | 28.0 | 3.32e-01 | 96.5% | 76.9% |
| 1bdfA01 | 3.30.1360.10 | Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › RNA polymerase, RBP11-like subunit | 0.50 | 23.0 | 2.84e-01 | 86.0% | 64.2% |
ECOD (27)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3312228 | 230.5.1.1 ↗ | a+b two layers › T-fold › Band 7/SPFH domain › Band 7/SPFH domain › Band_7 | 0.87 | 52.0 | 5.91e-01 | 100.0% | 77.0% |
| 3599340 | 230.5.1.0 ↗ | a+b two layers › T-fold › Band 7/SPFH domain › Band 7/SPFH domain | 0.86 | 52.0 | 5.88e-01 | 100.0% | 77.0% |
| 5058343 | 230.5.1.1 ↗ | a+b two layers › T-fold › Band 7/SPFH domain › Band 7/SPFH domain › Band_7 | 0.86 | 53.0 | 6.26e-01 | 100.0% | 85.6% |
| 3355174 | 230.5.1.1 ↗ | a+b two layers › T-fold › Band 7/SPFH domain › Band 7/SPFH domain › Band_7 | 0.85 | 50.0 | 6.03e-01 | 100.0% | 85.0% |
| 5010097 | 230.5.1.1 ↗ | a+b two layers › T-fold › Band 7/SPFH domain › Band 7/SPFH domain › Band_7 | 0.84 | 53.0 | 6.46e-01 | 100.0% | 94.8% |
| 3998793 | 230.5.1.1 ↗ | a+b two layers › T-fold › Band 7/SPFH domain › Band 7/SPFH domain › Band_7 | 0.84 | 54.0 | 5.67e-01 | 100.0% | 70.0% |
| 4490995 | 230.5.1.1 ↗ | a+b two layers › T-fold › Band 7/SPFH domain › Band 7/SPFH domain › Band_7 | 0.83 | 54.0 | 4.56e-01 | 100.0% | 42.3% |
| 3482847 | 230.5.1.0 ↗ | a+b two layers › T-fold › Band 7/SPFH domain › Band 7/SPFH domain | 0.83 | 54.0 | 6.28e-01 | 100.0% | 89.6% |
| 3976795 | 230.5.1.1 ↗ | a+b two layers › T-fold › Band 7/SPFH domain › Band 7/SPFH domain › Band_7 | 0.83 | 55.0 | 6.22e-01 | 100.0% | 85.9% |
| 4956270 | 230.5.1.1 ↗ | a+b two layers › T-fold › Band 7/SPFH domain › Band 7/SPFH domain › Band_7 | 0.79 | 58.0 | 5.89e-01 | 100.0% | 75.9% |
| 3605179 | 230.5.1.1 ↗ | a+b two layers › T-fold › Band 7/SPFH domain › Band 7/SPFH domain › Band_7 | 0.78 | 48.0 | 4.91e-01 | 100.0% | 63.0% |
| 3227676 | 230.5.1.1 ↗ | a+b two layers › T-fold › Band 7/SPFH domain › Band 7/SPFH domain › Band_7 | 0.75 | 45.0 | 4.67e-01 | 100.0% | 63.1% |
| 4561608 | 230.5.1.3 ↗ | a+b two layers › T-fold › Band 7/SPFH domain › Band 7/SPFH domain › FliL | 0.75 | 44.0 | 5.63e-01 | 100.0% | 99.0% |
| 3386432 | 230.5.1.1 ↗ | a+b two layers › T-fold › Band 7/SPFH domain › Band 7/SPFH domain › Band_7 | 0.75 | 55.0 | 5.62e-01 | 100.0% | 78.2% |
| 3728098 | 230.5.1.1 ↗ | a+b two layers › T-fold › Band 7/SPFH domain › Band 7/SPFH domain › Band_7 | 0.73 | 53.0 | 5.71e-01 | 100.0% | 85.3% |
| 3260338 | 230.5.1.1 ↗ | a+b two layers › T-fold › Band 7/SPFH domain › Band 7/SPFH domain › Band_7 | 0.73 | 44.0 | 5.13e-01 | 100.0% | 82.4% |
| 4014637 | 230.1.1.4 ↗ | a+b two layers › T-fold › Tetrahydrobiopterin biosynthesis enzymes-like › Tetrahydrobiopterin biosynthesis enzymes-like › FolB | 0.71 | 38.0 | 4.68e-01 | 98.8% | 80.9% |
| 3781163 | 230.1.1.4 ↗ | a+b two layers › T-fold › Tetrahydrobiopterin biosynthesis enzymes-like › Tetrahydrobiopterin biosynthesis enzymes-like › FolB | 0.70 | 38.0 | 4.51e-01 | 100.0% | 75.0% |
| 3388200 | 230.1.1.4 ↗ | a+b two layers › T-fold › Tetrahydrobiopterin biosynthesis enzymes-like › Tetrahydrobiopterin biosynthesis enzymes-like › FolB | 0.69 | 37.0 | 4.54e-01 | 98.8% | 81.9% |
| 3531258 | 230.5.1.2 ↗ | a+b two layers › T-fold › Band 7/SPFH domain › Band 7/SPFH domain › MVP_shoulder | 0.67 | 48.0 | 5.40e-01 | 100.0% | 92.6% |
| 4354607 | 230.1.1.5 ↗ | a+b two layers › T-fold › Tetrahydrobiopterin biosynthesis enzymes-like › Tetrahydrobiopterin biosynthesis enzymes-like › GCHY-1 | 0.67 | 37.0 | 4.26e-01 | 100.0% | 74.2% |
| 3551902 | 3919.1.1.4 ↗ | alpha duplicates or obligate multimers › N-terminal domain of COMMD9 › N-terminal domain of COMMD9 › N-terminal domain of COMMD9 › COMMD1_N | 0.55 | 33.0 | 3.96e-01 | 100.0% | 90.9% |
| 5069559 | 212.1.1.0 ↗ | a+b two layers › Ribosomal protein S5 domain 2-like › Ribosomal protein S5 domain 2-like › Ribosomal protein S5 domain 2-like | 0.55 | 28.0 | 3.44e-01 | 100.0% | 77.1% |
| 3270230 | 212.1.1.17 ↗ | a+b two layers › Ribosomal protein S5 domain 2-like › Ribosomal protein S5 domain 2-like › Ribosomal protein S5 domain 2-like › EFG_IV | 0.53 | 34.0 | 3.75e-01 | 100.0% | 79.3% |
| 5031423 | 212.1.1.0 ↗ | a+b two layers › Ribosomal protein S5 domain 2-like › Ribosomal protein S5 domain 2-like › Ribosomal protein S5 domain 2-like | 0.53 | 32.0 | 3.53e-01 | 96.5% | 73.3% |
| 3170065 | 210.2.1.1 ↗ | a+b four layers › Ntn/PP2C › Protein serine/threonine phosphatase 2C, catalytic domain › Protein serine/threonine phosphatase 2C, catalytic domain › PP2C | 0.52 | 45.0 | 3.52e-01 | 94.2% | 69.3% |
| 4551640 | 230.1.1.5 ↗ | a+b two layers › T-fold › Tetrahydrobiopterin biosynthesis enzymes-like › Tetrahydrobiopterin biosynthesis enzymes-like › GCHY-1 | 0.52 | 35.0 | 3.95e-01 | 100.0% | 87.4% |
D3
medium
residues 270-320
Domain cluster:
representative
CATH (1)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2kg7A00 | 1.10.287.1060 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ESAT-6-like | 0.72 | 52.0 | 4.14e-01 | 92.2% | 40.2% |