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NC_011645.1__YP_002333608.1__TP21-L_gp47__00047

Bact-Vir

Identity

Accession:: NC_011645 ↗
Kingdom:: phage

Quality

74.8 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Lwoffvirus› Bacillus_phage_TP21-L

TaxID: 565140

Cluster

Singleton — not in a non-trivial cluster

3D Structure

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Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 3-62

PDB

Domain cluster: representative

CATH (9)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
2mh3A00	4.10.280.10	Few Secondary Structures › Irregular › MYOD Basic-Helix-Loop-Helix Domain, subunit B › Helix-loop-helix DNA-binding domain	0.76	55.0	5.27e-01	80.0%	67.1%
2ivxB01	1.10.472.10	Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like	0.71	49.0	3.77e-01	73.3%	65.0%
6h7bA01	1.10.1900.10	Mainly Alpha › Orthogonal Bundle › c-terminal domain of poly(a) binding protein › c-terminal domain of poly(a) binding protein	0.69	49.0	4.64e-01	76.7%	66.2%
2zm5A02	1.10.20.140	Mainly Alpha › Orthogonal Bundle › Histone, subunit A ›	0.69	48.0	4.54e-01	76.7%	61.1%
4i8oA03	1.10.8.1130	Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Bacterial toxin RNase RnlA/LsoA, C-terminal Dmd-binding domain	0.63	41.0	3.98e-01	70.0%	59.7%
3egoA02	1.10.1040.10	Mainly Alpha › Orthogonal Bundle › N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 › N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2	0.59	43.0	3.44e-01	78.3%	53.7%
1c00A00	3.40.50.1820	Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain	0.56	46.0	2.80e-01	98.3%	18.8%
4oe8C00	1.10.8.1170	Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 ›	0.56	41.0	3.68e-01	80.0%	92.0%
5h5mA02	1.20.120.230	Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Alpha-catenin/vinculin-like	0.53	41.0	3.29e-01	86.7%	86.9%

ECOD (13)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
4540906	101.1.4.82 ↗	alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › DUF3603	0.75	52.0	4.44e-01	78.3%	45.7%
4098259	110.1.1.13 ↗	alpha arrays › DEATH domain › DEATH domain › DEATH domain › DUF3603	0.75	50.0	4.28e-01	78.3%	42.9%
3595102	632.7.1.0 ↗	alpha bundles › immunoglobulin/albumin-binding domain-like › Heat shock protein 70kD (HSP70), C-terminal subdomain › Heat shock protein 70kD (HSP70), C-terminal subdomain	0.71	52.0	4.60e-01	78.3%	95.3%
3806684	148.1.3.0 ↗	alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain	0.70	49.0	4.36e-01	75.0%	57.8%
5045559	101.1.2.652 ↗	alpha arrays › HTH › HTH › winged helix domain › Fe_dep_repr_C	0.70	48.0	3.71e-01	73.3%	36.4%
3765706	3949.1.1.1 ↗	alpha arrays › tRNA delta(2)-isopentenylpyrophosphate transferase helical insertion domain › tRNA delta(2)-isopentenylpyrophosphate transferase helical insertion domain › tRNA delta(2)-isopentenylpyrophosphate transferase helical insertion domain › IPPT	0.66	45.0	4.17e-01	73.3%	53.8%
3299932	148.1.3.0 ↗	alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain	0.66	47.0	5.06e-01	76.7%	98.0%
4982068	101.1.2.652 ↗	alpha arrays › HTH › HTH › winged helix domain › Fe_dep_repr_C	0.64	47.0	3.61e-01	80.0%	92.4%
359006	101.1.2.1 ↗	alpha arrays › HTH › HTH › winged helix domain › HTH_1	0.61	33.0	3.07e-01	75.0%	40.8%
3454325	148.1.3.0 ↗	alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain	0.60	44.0	4.14e-01	80.0%	68.0%
5027285	101.1.2.21 ↗	alpha arrays › HTH › HTH › winged helix domain › Fe_dep_repress	0.57	48.0	3.64e-01	96.7%	98.1%
3560402	101.1.1.36 ↗	alpha arrays › HTH › HTH › Three-helical HTH › Homeobox_KN	0.57	31.0	3.08e-01	76.7%	47.7%
3655807	148.1.1.34 ↗	alpha arrays › Histone-like › Histone-related › Histone › DUF502	0.53	41.0	3.68e-01	88.3%	62.2%