Back to structures

NC_011645.1__YP_002333610.1__TP21-L_gp49__00049

Bact-Vir

NC_011645.1__YP_002333610.1__TP21-L_gp49__00049

Identity

Accession:
NC_011645 ↗
Kingdom:
phage

Quality

71.3 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 42-102
PDB
Domain cluster: representative
CATH (3)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
5c17A00 3.30.450.410 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › 0.67 45.0 3.11e-01 70.5% 38.8%
3mhsA01 3.30.40.10 Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) 0.56 37.0 3.02e-01 70.5% 42.5%
2qgpA00 1.10.30.50 Mainly Alpha › Orthogonal Bundle › DNA Binding (I), subunit A › 0.55 38.0 3.52e-01 75.4% 83.1%
ECOD (3)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
185780 378.1.1.2 few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › His-Me finger endonucleases › HNH 0.57 39.0 3.49e-01 73.8% 64.9%
3257582 377.1.1.5 few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like › LIM 0.53 38.0 3.78e-01 77.0% 81.5%
4135424 376.1.1.23 few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-C3HC4_2 0.51 35.0 3.62e-01 70.5% 80.0%