NC_012530.1__YP_002790745.1__lb338_phage_66__00066

Bact-Vir

Identity

72.7 mean pLDDT

Heunggongvirae› Uroviricota› Caudoviricetes› Herelleviridae› Mooreparkvirus› Lactobacillus_phage_Lb338-1

TaxID: 2892342

View cluster (4 members)

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high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 12-138

PDB

Domain cluster: rep: HM004124.1__ADG59954.1__Acj9p054__00054__D4-153

CATH (10)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
4noiA01	3.30.1360.10	Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › RNA polymerase, RBP11-like subunit	0.62	36.0	4.00e-01	89.0%	69.9%
3ue2A01	3.30.70.330	Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain	0.60	30.0	3.50e-01	80.3%	65.9%
3vg8A00	3.30.200.270	Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 ›	0.60	36.0	3.92e-01	89.0%	71.4%
1dfaA03	3.10.28.10	Alpha Beta › Roll › Endonuclease I-creI › Homing endonucleases	0.57	36.0	4.06e-01	96.9%	84.2%
1lp9E02	2.60.40.10	Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins	0.57	30.0	3.55e-01	87.4%	76.2%
2fbjH02	2.60.40.10	Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins	0.55	29.0	3.75e-01	87.4%	89.0%
3f3bA00	2.40.10.370	Mainly Beta › Beta Barrel › Thrombin, subunit H › Protein of unknown function DUF3599	0.54	42.0	4.37e-01	100.0%	90.4%
1y12B00	2.30.110.20	Mainly Beta › Roll › Pnp Oxidase; Chain A › Hcp1-like	0.52	45.0	4.25e-01	100.0%	76.3%
3swoA02	2.40.110.10	Mainly Beta › Beta Barrel › Butyryl-CoA Dehydrogenase, subunit A; domain 2 › Butyryl-CoA Dehydrogenase, subunit A, domain 2	0.51	35.0	3.77e-01	92.1%	86.5%
7d58G01	3.30.1490.120	Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › RNA polymerase Rpb7-like, N-terminal domain	0.50	29.0	3.56e-01	77.2%	94.7%

ECOD (7)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
3520265	1.1.13.0 ↗	beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins	0.85	81.0	7.68e-01	100.0%	90.3%
4975577	242.1.1.0 ↗	a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases	0.58	35.0	3.17e-01	96.1%	42.9%
3216224	304.9.1.0 ↗	a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD	0.57	33.0	3.78e-01	92.9%	75.8%
5055194	327.18.1.0 ↗	a+b two layers › Alpha-lytic protease prodomain-like › 40S ribosomal protein S7-A › 40S ribosomal protein S7-A	0.56	27.0	3.71e-01	85.0%	90.8%
4012639	11.1.1.0 ↗	beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like	0.52	33.0	3.52e-01	88.2%	71.8%
3401074	11.1.1.179 ↗	beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Ig_3	0.51	33.0	3.53e-01	89.0%	72.2%
4982153	1.1.5.0 ↗	beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel	0.51	46.0	3.58e-01	100.0%	45.9%

D2 high residues 143-217

PDB