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NC_013055.1__YP_003090164.1__BuPhKS9_gp07__00007
Bact-VirNC_013055.1__YP_003090164.1__BuPhKS9_gp07__00007
Identity
- Accession:
- NC_013055 ↗
- Kingdom:
- phage
Quality
74.2
mean pLDDT
Taxonomy
TaxID: 335797
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 8-64
Domain cluster:
representative
CATH (10)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1qsaA03 | 1.10.530.10 | Mainly Alpha › Orthogonal Bundle › Lysozyme › | 0.77 | 56.0 | 3.93e-01 | 77.2% | 26.6% |
| 3fayA00 | 1.10.506.10 | Mainly Alpha › Orthogonal Bundle › GTPase Activation - p120GAP; domain 1 › GTPase Activation - p120gap; domain 1 | 0.77 | 62.0 | 3.71e-01 | 87.7% | 47.8% |
| 2zuvA01 | 3.20.20.80 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases | 0.73 | 52.0 | 3.26e-01 | 77.2% | 28.1% |
| 1ydxA02 | 1.10.287.1120 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Bipartite methylase S protein | 0.66 | 55.0 | 4.76e-01 | 93.0% | 68.9% |
| 6lccA01 | 1.10.600.10 | Mainly Alpha › Orthogonal Bundle › Farnesyl Diphosphate Synthase › Farnesyl Diphosphate Synthase | 0.63 | 56.0 | 3.40e-01 | 98.2% | 18.6% |
| 1oj6A00 | 1.10.490.10 | Mainly Alpha › Orthogonal Bundle › Globin-like › Globins | 0.59 | 48.0 | 3.61e-01 | 91.2% | 39.5% |
| 3ckdA01 | 1.20.1270.130 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › Shigella T3SS effector IpaH domain | 0.58 | 38.0 | 3.65e-01 | 70.2% | 57.7% |
| 1vw4801 | 1.10.1200.10 | Mainly Alpha › Orthogonal Bundle › Non-ribosomal Peptide Synthetase Peptidyl Carrier Protein; Chain A › ACP-like | 0.55 | 39.0 | 3.65e-01 | 75.4% | 93.2% |
| 3crvA03 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.54 | 41.0 | 2.90e-01 | 93.0% | 24.4% |
| 2fi1A02 | 1.10.150.240 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 | 0.53 | 37.0 | 3.64e-01 | 75.4% | 98.4% |
ECOD (5)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3361421 | 2002.1.1.254 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › GH5_mannosidase | 0.69 | 47.0 | 2.92e-01 | 71.9% | 17.5% |
| 4120246 | 3664.1.1.1 ↗ | alpha arrays › Small, acid-soluble spore protein C › Small, acid-soluble spore protein C › Small, acid-soluble spore protein C › SASP | 0.69 | 52.0 | 5.34e-01 | 82.5% | 87.3% |
| 4028974 | 5042.1.1.1 ↗ | extended segments › Magnesium transport protein CorA, transmembrane region › Magnesium transport protein CorA, transmembrane region › Magnesium transport protein CorA, transmembrane region › CorA | 0.66 | 50.0 | 4.81e-01 | 89.5% | 70.8% |
| 4886213 | 4121.1.1.1 ↗ | a+b three layers › CorA soluble domain-like › CorA soluble domain-like › CorA soluble domain-like › CorA | 0.62 | 47.0 | 4.64e-01 | 82.5% | 76.7% |
| 4947641 | 5042.1.1.0 ↗ | extended segments › Magnesium transport protein CorA, transmembrane region › Magnesium transport protein CorA, transmembrane region › Magnesium transport protein CorA, transmembrane region | 0.60 | 47.0 | 4.48e-01 | 84.2% | 73.8% |