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NC_013638.1__YP_003345501.1__SBWP25_0036__00036
Bact-VirNC_013638.1__YP_003345501.1__SBWP25_0036__00036
Identity
- Accession:
- NC_013638 ↗
- Kingdom:
- phage
Quality
78.2
mean pLDDT
Taxonomy
Heunggongvirae›
Uroviricota›
Caudoviricetes›
Autographivirales›
Autoscriptoviridae›
Tunggulvirus›
Pseudomonas_phage_phi2
TaxID: 1450169
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 504-605
Domain cluster:
representative
CATH (55)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2w38A02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.79 | 75.0 | 7.47e-01 | 100.0% | 99.0% |
| 2r15A01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.67 | 47.0 | 4.60e-01 | 100.0% | 66.7% |
| 3s98A03 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.67 | 48.0 | 5.04e-01 | 100.0% | 82.8% |
| 5z06B02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.66 | 43.0 | 4.49e-01 | 98.0% | 72.8% |
| 2esvD01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.64 | 52.0 | 5.12e-01 | 99.0% | 81.7% |
| 4dlqA03 | 2.60.220.50 | Mainly Beta › Sandwich › Chondroitinase Ac; Chain A, domain 3 › | 0.64 | 46.0 | 3.68e-01 | 90.2% | 38.9% |
| 1n26A02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.64 | 41.0 | 4.54e-01 | 94.1% | 84.6% |
| 3qqnA00 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.63 | 51.0 | 4.89e-01 | 100.0% | 76.7% |
| 2ii7H00 | 2.60.290.11 | Mainly Beta › Sandwich › Hypothetical Protein Tm1070; Chain: A › TM1070-like | 0.63 | 46.0 | 4.60e-01 | 100.0% | 74.5% |
| 7y9aA01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.63 | 44.0 | 4.75e-01 | 99.0% | 86.2% |
| 4nofB00 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.62 | 50.0 | 5.00e-01 | 96.1% | 83.0% |
| 4b60A01 | 2.60.40.1280 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.62 | 46.0 | 4.10e-01 | 100.0% | 55.2% |
| 4uzgA01 | 2.60.40.740 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.62 | 57.0 | 4.90e-01 | 100.0% | 65.4% |
| 4fmrB01 | 2.70.50.70 | Mainly Beta › Distorted Sandwich › Coagulation Factor XIII; Chain A, domain 1 › | 0.61 | 49.0 | 4.35e-01 | 100.0% | 59.1% |
| 5swsE01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.60 | 50.0 | 4.93e-01 | 100.0% | 82.9% |
| 3ethA03 | 3.30.1490.20 | Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › ATP-grasp fold, A domain | 0.60 | 36.0 | 4.41e-01 | 96.1% | 98.4% |
| 2ic2A00 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.60 | 46.0 | 4.62e-01 | 100.0% | 80.8% |
| 4hljA01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.60 | 45.0 | 4.39e-01 | 100.0% | 72.3% |
| 1cduA01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.60 | 48.0 | 4.89e-01 | 96.1% | 88.8% |
| 5edxA00 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.60 | 51.0 | 4.96e-01 | 99.0% | 84.2% |
| 1evuA01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.60 | 53.0 | 4.51e-01 | 100.0% | 69.9% |
| 4ye4L01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.59 | 52.0 | 5.08e-01 | 100.0% | 86.7% |
| 7uzsX01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.59 | 52.0 | 4.83e-01 | 99.0% | 90.1% |
| 1z9mA00 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.59 | 44.0 | 4.46e-01 | 100.0% | 79.8% |
| 3rbgD00 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.58 | 44.0 | 4.41e-01 | 99.0% | 79.6% |
| 3omzA02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.58 | 48.0 | 4.81e-01 | 98.0% | 90.2% |
| 6ovnB01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.58 | 48.0 | 4.61e-01 | 99.0% | 78.6% |
| 4bfiB01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.58 | 48.0 | 4.68e-01 | 99.0% | 82.1% |
| 1r17A02 | 2.60.40.1290 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.58 | 49.0 | 4.25e-01 | 100.0% | 60.1% |
| 4g1vA02 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.57 | 51.0 | 4.92e-01 | 100.0% | 94.1% |
| 5uv6B02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.57 | 35.0 | 3.84e-01 | 100.0% | 75.0% |
| 5t89Y06 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.57 | 42.0 | 4.43e-01 | 97.1% | 87.0% |
| 1g1kA00 | 2.60.40.680 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.57 | 43.0 | 3.92e-01 | 100.0% | 58.7% |
| 4gwmA02 | 2.60.120.200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.56 | 43.0 | 3.73e-01 | 100.0% | 51.2% |
| 3vvvA00 | 2.60.40.2840 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.56 | 43.0 | 4.30e-01 | 100.0% | 79.6% |
| 2jngA00 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.56 | 40.0 | 4.51e-01 | 94.1% | 98.7% |
| 7uzsX04 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.56 | 42.0 | 4.32e-01 | 97.1% | 85.4% |
| 2h6oA03 | 2.60.40.2820 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.55 | 47.0 | 4.60e-01 | 96.1% | 86.4% |
| 2l0dA00 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.55 | 43.0 | 4.18e-01 | 100.0% | 76.3% |
| 2mcmA00 | 2.60.40.230 | Mainly Beta › Sandwich › Immunoglobulin-like › Neocarzinostatin-like | 0.55 | 47.0 | 4.65e-01 | 99.0% | 89.3% |
| 4oy6A00 | 2.70.50.50 | Mainly Beta › Distorted Sandwich › Coagulation Factor XIII; Chain A, domain 1 › chitin-binding protein cbp21 | 0.54 | 48.0 | 3.99e-01 | 100.0% | 91.4% |
| 2druA01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.54 | 44.0 | 4.43e-01 | 100.0% | 86.4% |
| 4b5qA00 | 2.70.50.70 | Mainly Beta › Distorted Sandwich › Coagulation Factor XIII; Chain A, domain 1 › | 0.54 | 49.0 | 3.81e-01 | 100.0% | 67.3% |
| 1wzlA01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.54 | 42.0 | 4.03e-01 | 100.0% | 72.7% |
| 4bsjA02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.54 | 48.0 | 4.52e-01 | 100.0% | 83.7% |
| 5fjqA00 | 2.70.50.50 | Mainly Beta › Distorted Sandwich › Coagulation Factor XIII; Chain A, domain 1 › chitin-binding protein cbp21 | 0.53 | 47.0 | 3.95e-01 | 100.0% | 89.4% |
| 4oy7E00 | 2.70.50.50 | Mainly Beta › Distorted Sandwich › Coagulation Factor XIII; Chain A, domain 1 › chitin-binding protein cbp21 | 0.53 | 47.0 | 3.82e-01 | 100.0% | 91.3% |
| 3pieC09 | 2.30.30.750 | Mainly Beta › Roll › SH3 type barrels. › | 0.52 | 38.0 | 3.91e-01 | 91.2% | 78.8% |
| 4aw7A03 | 2.60.120.1200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.52 | 47.0 | 4.45e-01 | 100.0% | 90.2% |
| 4eisA00 | 2.70.50.70 | Mainly Beta › Distorted Sandwich › Coagulation Factor XIII; Chain A, domain 1 › | 0.52 | 45.0 | 3.57e-01 | 99.0% | 69.6% |
| 6tr4A02 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.51 | 46.0 | 4.27e-01 | 100.0% | 100.0% |
| 6tfjA01 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.51 | 36.0 | 3.56e-01 | 100.0% | 66.1% |
| 3uamC00 | 2.70.50.50 | Mainly Beta › Distorted Sandwich › Coagulation Factor XIII; Chain A, domain 1 › chitin-binding protein cbp21 | 0.51 | 45.0 | 3.69e-01 | 100.0% | 80.3% |
| 1st8A02 | 2.60.120.560 | Mainly Beta › Sandwich › Jelly Rolls › Exo-inulinase; domain 1 | 0.51 | 45.0 | 3.70e-01 | 100.0% | 97.9% |
| 1akpA00 | 2.60.40.230 | Mainly Beta › Sandwich › Immunoglobulin-like › Neocarzinostatin-like | 0.51 | 44.0 | 4.26e-01 | 100.0% | 88.6% |
ECOD (73)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 184956 | 11.1.1.356 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › PA2794-like_C | 0.79 | 75.0 | 7.41e-01 | 100.0% | 97.2% |
| 1562396 | 11.1.1.122 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › GO-like_E_set | 0.68 | 51.0 | 5.26e-01 | 100.0% | 81.8% |
| 3273204 | 11.1.1.802 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › DUF8390 | 0.67 | 47.0 | 4.90e-01 | 100.0% | 78.9% |
| 4307740 | 11.1.1.179 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Ig_3 | 0.66 | 43.0 | 4.51e-01 | 95.1% | 74.4% |
| 3412977 | 11.1.1.2 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › fn3 | 0.65 | 45.0 | 4.58e-01 | 100.0% | 73.0% |
| 3927343 | 389.1.1.0 ↗ | few secondary structure elements › EGF-like › EGF-related › EGF/Laminin | 0.65 | 48.0 | 3.44e-01 | 100.0% | 25.7% |
| 1285826 | 11.1.1.99 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › V-set | 0.64 | 52.0 | 4.99e-01 | 99.0% | 74.8% |
| 3556691 | 11.1.1.99 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › V-set | 0.64 | 52.0 | 5.48e-01 | 99.0% | 98.9% |
| 4942269 | 11.1.1.2 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › fn3 | 0.64 | 43.0 | 4.35e-01 | 100.0% | 70.0% |
| 4973722 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.62 | 52.0 | 5.17e-01 | 97.1% | 87.6% |
| 3909461 | 11.1.1.2 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › fn3 | 0.61 | 42.0 | 4.46e-01 | 100.0% | 80.0% |
| 3915149 | 11.1.1.2 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › fn3 | 0.61 | 43.0 | 4.02e-01 | 100.0% | 56.9% |
| 3846901 | 11.1.1.99 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › V-set | 0.61 | 50.0 | 5.32e-01 | 96.1% | 100.0% |
| 3873369 | 11.1.1.99 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › V-set | 0.61 | 50.0 | 5.26e-01 | 97.1% | 100.0% |
| 5041184 | 11.1.1.103 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › CARDB | 0.61 | 40.0 | 4.22e-01 | 90.2% | 75.6% |
| 3884372 | 11.1.1.711 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › FN3_IL27B_N | 0.61 | 45.0 | 4.60e-01 | 100.0% | 81.0% |
| 3940191 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.60 | 45.0 | 4.21e-01 | 100.0% | 64.0% |
| 3767551 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.60 | 44.0 | 4.43e-01 | 97.1% | 75.2% |
| 3919016 | 11.1.1.16 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Transglut_N | 0.60 | 53.0 | 4.74e-01 | 99.0% | 82.8% |
| 3478064 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.59 | 44.0 | 4.51e-01 | 100.0% | 81.0% |
| 5039915 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.59 | 48.0 | 4.97e-01 | 100.0% | 96.8% |
| 2497009 | 10.2.1.41 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Capsid_NCLDV | 0.58 | 53.0 | 4.28e-01 | 100.0% | 86.8% |
| 3249466 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.58 | 45.0 | 4.38e-01 | 99.0% | 73.9% |
| 3531898 | 11.1.1.16 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Transglut_N | 0.58 | 52.0 | 4.73e-01 | 100.0% | 82.9% |
| 4877101 | 11.1.1.99 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › V-set | 0.58 | 49.0 | 4.60e-01 | 100.0% | 75.6% |
| 3231574 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.58 | 39.0 | 4.02e-01 | 100.0% | 71.0% |
| 3522444 | 11.1.1.3 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › ig | 0.58 | 49.0 | 4.78e-01 | 100.0% | 84.5% |
| 3906456 | 11.1.1.99 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › V-set | 0.58 | 49.0 | 4.73e-01 | 99.0% | 81.7% |
| 3200952 | 11.1.1.470 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Psg1 | 0.57 | 45.0 | 4.40e-01 | 98.0% | 75.7% |
| 3595568 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.57 | 43.0 | 4.36e-01 | 97.1% | 81.0% |
| 5018137 | 11.1.1.103 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › CARDB | 0.57 | 37.0 | 3.97e-01 | 90.2% | 76.4% |
| 4010369 | 11.1.4.51 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like › phage_tail_N | 0.57 | 36.0 | 3.67e-01 | 91.2% | 64.0% |
| 5034544 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.57 | 40.0 | 4.14e-01 | 100.0% | 80.6% |
| 5039112 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.56 | 40.0 | 4.00e-01 | 99.0% | 72.4% |
| 3580756 | 10.2.1.0 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) | 0.56 | 50.0 | 4.06e-01 | 100.0% | 87.0% |
| 5034011 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.56 | 40.0 | 4.16e-01 | 99.0% | 81.1% |
| 5034334 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.56 | 41.0 | 4.20e-01 | 100.0% | 80.0% |
| 3887308 | 11.1.1.99 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › V-set | 0.56 | 44.0 | 4.42e-01 | 99.0% | 82.9% |
| 3918550 | 11.1.1.99 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › V-set | 0.56 | 49.0 | 4.12e-01 | 100.0% | 58.2% |
| 3973898 | 1.1.7.89 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › PF26002 | 0.55 | 49.0 | 4.41e-01 | 100.0% | 75.9% |
| 3268673 | 304.8.1.0 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like | 0.55 | 35.0 | 3.66e-01 | 91.2% | 70.0% |
| 3942243 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.55 | 48.0 | 4.40e-01 | 100.0% | 84.3% |
| 1144166 | 11.1.1.295 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Herpes_gp350_C | 0.55 | 47.0 | 4.32e-01 | 96.1% | 72.0% |
| 2140734 | 11.1.1.49 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › LPMO_10 | 0.55 | 49.0 | 3.98e-01 | 100.0% | 91.8% |
| 3882154 | 11.1.1.99 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › V-set | 0.55 | 48.0 | 4.02e-01 | 99.0% | 56.6% |
| 3888037 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.55 | 45.0 | 3.38e-01 | 98.0% | 35.7% |
| 4927390 | 10.1.2.0 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) | 0.55 | 50.0 | 4.72e-01 | 100.0% | 86.7% |
| 5060986 | 11.1.1.103 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › CARDB | 0.54 | 40.0 | 4.18e-01 | 93.1% | 85.3% |
| 3491693 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.54 | 43.0 | 3.85e-01 | 100.0% | 60.7% |
| 3896419 | 11.1.1.99 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › V-set | 0.54 | 42.0 | 4.30e-01 | 96.1% | 85.0% |
| 3253552 | 11.1.1.214 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Pur_ac_phosph_N | 0.54 | 43.0 | 4.28e-01 | 100.0% | 84.8% |
| 5033070 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.54 | 39.0 | 3.98e-01 | 100.0% | 80.0% |
| 3778810 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.53 | 45.0 | 3.92e-01 | 99.0% | 59.5% |
| 5042048 | 10.2.1.0 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) | 0.53 | 48.0 | 3.82e-01 | 100.0% | 95.1% |
| 4408923 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.53 | 47.0 | 4.12e-01 | 100.0% | 67.1% |
| 3241031 | 10.32.1.72 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › TPPII_GBD | 0.53 | 47.0 | 4.60e-01 | 100.0% | 94.8% |
| 5034175 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.53 | 38.0 | 3.97e-01 | 100.0% | 86.7% |
| 3509389 | 10.1.1.0 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases | 0.53 | 44.0 | 4.05e-01 | 91.2% | 82.3% |
| 3491699 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.52 | 42.0 | 3.72e-01 | 100.0% | 58.1% |
| 5081120 | 11.1.1.103 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › CARDB | 0.52 | 42.0 | 4.11e-01 | 100.0% | 80.0% |
| 5002193 | 10.1.2.0 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) | 0.52 | 48.0 | 4.67e-01 | 100.0% | 96.4% |
| 3486031 | 11.1.1.2 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › fn3 | 0.52 | 45.0 | 4.27e-01 | 100.0% | 81.7% |
| 3624575 | 10.32.1.72 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › TPPII_GBD | 0.52 | 47.0 | 4.49e-01 | 100.0% | 87.5% |
| 3945527 | 10.32.1.239 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › FNIII-A_GpJ | 0.52 | 46.0 | 4.25e-01 | 100.0% | 97.0% |
| 3490350 | 382.1.1.0 ↗ | few secondary structure elements › Snake toxin-like › Snake toxin-like › Snake toxin-like | 0.52 | 28.0 | 3.31e-01 | 76.5% | 78.5% |
| 3742116 | 10.32.1.72 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › TPPII_GBD | 0.52 | 47.0 | 4.51e-01 | 100.0% | 96.5% |
| 3477591 | 11.1.5.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f | 0.52 | 45.0 | 3.97e-01 | 100.0% | 65.3% |
| 4623622 | 10.4.1.0 ↗ | beta sandwiches › jelly-roll › Spermadhesin, CUB domain › Spermadhesin, CUB domain | 0.52 | 40.0 | 4.14e-01 | 100.0% | 89.5% |
| 3294874 | 10.32.1.0 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like | 0.52 | 41.0 | 3.27e-01 | 100.0% | 39.6% |
| 3526370 | 10.32.1.72 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › TPPII_GBD | 0.52 | 46.0 | 4.43e-01 | 100.0% | 91.7% |
| 4025604 | 10.32.1.4 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › EMP24_GP25L | 0.51 | 43.0 | 4.21e-01 | 100.0% | 86.4% |
| 3481325 | 3156.1.1.0 ↗ | beta sandwiches › Cupredoxin-like › Cupredoxin-related › Cupredoxin-related | 0.51 | 40.0 | 3.77e-01 | 100.0% | 70.4% |
| 4514238 | 1.1.8.5 ↗ | beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain › tRNA_Me_trans_C | 0.50 | 33.0 | 3.67e-01 | 89.2% | 88.5% |
D2
medium
residues 283-373_457-467
Domain cluster:
rep: OQ817844.1__WNO48467.1__X__00018__D80-160
CATH (2)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1ocyA01 | 3.90.1340.10 | Alpha Beta › Alpha-Beta Complex › heat- and protease-stable fragment of the bacteriophage t4 short fibre, domain 3 › Phage tail collar domain | 0.88 | 54.0 | 6.20e-01 | 100.0% | 82.9% |
| 2xgfA01 | 3.90.1340.10 | Alpha Beta › Alpha-Beta Complex › heat- and protease-stable fragment of the bacteriophage t4 short fibre, domain 3 › Phage tail collar domain | 0.81 | 43.0 | 5.59e-01 | 100.0% | 94.6% |
ECOD (3)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1839976 | 877.1.1.3 ↗ | a+b duplicates or obligate multimers › gp11/gp12 receptor-binding domain › gp11/gp12 receptor-binding domain › gp11/gp12 receptor-binding domain › Collar,S_tail_recep_bd | 0.63 | 60.0 | 4.66e-01 | 100.0% | 93.4% |
| 141225 | 877.1.1.1 ↗ | a+b duplicates or obligate multimers › gp11/gp12 receptor-binding domain › gp11/gp12 receptor-binding domain › gp11/gp12 receptor-binding domain › Phage_fiber,Collar | 0.54 | 50.0 | 3.83e-01 | 100.0% | 98.6% |
| 3981712 | 877.1.1.2 ↗ | a+b duplicates or obligate multimers › gp11/gp12 receptor-binding domain › gp11/gp12 receptor-binding domain › gp11/gp12 receptor-binding domain › Collar | 0.53 | 48.0 | 4.22e-01 | 97.1% | 100.0% |