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NC_013643.1__YP_003347293.1__EP-phiFL2A_gp02__00002
Bact-VirNC_013643.1__YP_003347293.1__EP-phiFL2A_gp02__00002
Identity
- Accession:
- NC_013643 ↗
- Kingdom:
- phage
Quality
86.0
mean pLDDT
Taxonomy
TaxID: 673835
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 40-114
Domain cluster:
representative
CATH (6)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2oqhA01 | 3.30.390.10 | Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain | 0.73 | 45.0 | 3.89e-01 | 84.0% | 41.2% |
| 3jrqA00 | 3.60.40.10 | Alpha Beta › 4-Layer Sandwich › Phosphatase 2c; domain 1 › PPM-type phosphatase domain | 0.65 | 58.0 | 3.93e-01 | 98.7% | 64.2% |
| 1wvtA00 | 1.20.1200.10 | Mainly Alpha › Up-down Bundle › Hypothetical Protein Ta1238; Chain: A; › Cobalamin adenosyltransferase-like | 0.60 | 43.0 | 3.46e-01 | 74.7% | 88.5% |
| 4akgA04 | 1.20.58.1120 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Dynein motor heavy chain, linker domain, subdomain 4 | 0.59 | 43.0 | 3.43e-01 | 77.3% | 48.1% |
| 1v9vA01 | 1.20.1480.20 | Mainly Alpha › Up-down Bundle › hypothetical protein mp506/mpn330, domain 1 › MAST3 pre-PK domain-like | 0.56 | 41.0 | 3.83e-01 | 77.3% | 83.2% |
| 2oauA01 | 1.10.287.1260 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.54 | 45.0 | 4.14e-01 | 97.3% | 69.6% |
ECOD (9)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4972124 | 601.23.1.0 ↗ | alpha bundles › Four-helical up-and-down bundle › DNA repair protein MutS, domain III › DNA repair protein MutS, domain III | 0.65 | 50.0 | 3.37e-01 | 86.7% | 20.7% |
| 4057021 | 605.4.1.20 ↗ | alpha duplicates or obligate multimers › ROP-like › ROP protein › ROP protein › DUF6092 | 0.65 | 47.0 | 4.44e-01 | 86.7% | 63.3% |
| 3299872 | 5063.1.1.3 ↗ | alpha bundles › Photosystem I reaction center subunit X, PsaK › Photosystem I reaction center subunit X, PsaK › Photosystem I reaction center subunit X, PsaK › NADH-u_ox-rdase | 0.65 | 44.0 | 4.27e-01 | 70.7% | 63.5% |
| 4616055 | 5059.1.1.2 ↗ | alpha bundles › Drug/Metabolite transporter › Drug/Metabolite transporter › Drug/Metabolite transporter › Multi_Drug_Res | 0.59 | 45.0 | 4.02e-01 | 82.7% | 72.7% |
| 4390324 | 5059.1.1.2 ↗ | alpha bundles › Drug/Metabolite transporter › Drug/Metabolite transporter › Drug/Metabolite transporter › Multi_Drug_Res | 0.59 | 45.0 | 4.07e-01 | 82.7% | 76.9% |
| 3972954 | 5059.1.1.0 ↗ | alpha bundles › Drug/Metabolite transporter › Drug/Metabolite transporter › Drug/Metabolite transporter | 0.58 | 46.0 | 4.24e-01 | 86.7% | 78.0% |
| 5040955 | 5058.1.1.2 ↗ | alpha bundles › Mechanosensitive channel protein MscS (YggB), transmembrane region › Mechanosensitive channel protein MscS (YggB), transmembrane region › Mechanosensitive channel protein MscS (YggB), transmembrane region › MS_channel_1st | 0.58 | 46.0 | 4.16e-01 | 86.7% | 68.6% |
| 3723170 | 207.1.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats | 0.54 | 41.0 | 2.49e-01 | 84.0% | 12.1% |
| 4930860 | 5058.1.1.16 ↗ | alpha bundles › Mechanosensitive channel protein MscS (YggB), transmembrane region › Mechanosensitive channel protein MscS (YggB), transmembrane region › Mechanosensitive channel protein MscS (YggB), transmembrane region › MS_channel_1st_1 | 0.51 | 43.0 | 4.09e-01 | 97.3% | 78.9% |