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NC_013644.1__YP_003347373.1__EP-phiFL1A_gp19__00019
Bact-VirNC_013644.1__YP_003347373.1__EP-phiFL1A_gp19__00019
Identity
- Accession:
- NC_013644 ↗
- Kingdom:
- phage
Quality
82.1
mean pLDDT
Cluster
View cluster (3 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 7-58
Domain cluster:
rep: KX190835.1__ANT40106.1__BMBtpLA4_12__00012__D2-56
CATH (33)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1kq1H00 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.66 | 52.0 | 4.89e-01 | 90.4% | 90.9% |
| 1u1sA00 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.64 | 51.0 | 4.81e-01 | 92.3% | 90.9% |
| 1u3eM02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.62 | 43.0 | 4.01e-01 | 75.0% | 80.9% |
| 4chkB00 | 3.10.20.90 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 | 0.62 | 52.0 | 4.41e-01 | 98.1% | 84.6% |
| 1z8rA01 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.60 | 36.0 | 3.91e-01 | 100.0% | 73.8% |
| 3nyiB01 | 3.40.50.10170 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.59 | 44.0 | 3.27e-01 | 84.6% | 59.2% |
| 3fb9B00 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.59 | 46.0 | 4.08e-01 | 92.3% | 83.3% |
| 4kh9A03 | 2.60.120.1370 | Mainly Beta › Sandwich › Jelly Rolls › | 0.59 | 51.0 | 4.03e-01 | 100.0% | 75.2% |
| 5c3pD00 | 2.60.120.330 | Mainly Beta › Sandwich › Jelly Rolls › B-lactam Antibiotic, Isopenicillin N Synthase; Chain | 0.58 | 51.0 | 3.15e-01 | 100.0% | 22.1% |
| 1oeyL00 | 3.10.20.90 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 | 0.57 | 49.0 | 4.10e-01 | 100.0% | 82.7% |
| 3a7sA00 | 3.40.532.10 | Alpha Beta › 3-Layer(aba) Sandwich › Ubiquitin C-terminal Hydrolase UCH-l3 › Peptidase C12, ubiquitin carboxyl-terminal hydrolase | 0.57 | 46.0 | 3.26e-01 | 100.0% | 95.6% |
| 4chjA00 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.57 | 43.0 | 3.38e-01 | 86.5% | 69.4% |
| 1hufA00 | 3.30.1570.10 | Alpha Beta › 2-Layer Sandwich › YopH tyrosine phosphatase N-terminal domain › Protein-tyrosine phosphatase, YopH, N-terminal domain | 0.56 | 42.0 | 3.29e-01 | 82.7% | 97.6% |
| 1gsaA03 | 3.30.1490.20 | Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › ATP-grasp fold, A domain | 0.54 | 42.0 | 4.08e-01 | 98.1% | 96.9% |
| 3tiiA03 | 3.30.1490.20 | Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › ATP-grasp fold, A domain | 0.54 | 43.0 | 4.13e-01 | 98.1% | 98.5% |
| 4mamA02 | 3.30.1490.20 | Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › ATP-grasp fold, A domain | 0.54 | 43.0 | 3.88e-01 | 98.1% | 80.2% |
| 4dguA01 | 2.60.40.2680 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.54 | 42.0 | 3.39e-01 | 90.4% | 76.8% |
| 2re7A00 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.54 | 39.0 | 2.99e-01 | 78.8% | 52.3% |
| 1wgyA01 | 3.10.20.90 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 | 0.54 | 44.0 | 4.03e-01 | 100.0% | 93.4% |
| 3lp8A02 | 3.30.1490.20 | Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › ATP-grasp fold, A domain | 0.53 | 43.0 | 4.03e-01 | 100.0% | 95.7% |
| 3orqA03 | 3.30.1490.20 | Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › ATP-grasp fold, A domain | 0.53 | 41.0 | 4.05e-01 | 100.0% | 100.0% |
| 4nn5C01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.53 | 42.0 | 3.69e-01 | 92.3% | 75.0% |
| 2al3A00 | 3.10.20.90 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 | 0.53 | 43.0 | 3.93e-01 | 100.0% | 86.8% |
| 1z2nX03 | 3.30.1490.220 | Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › | 0.52 | 41.0 | 3.49e-01 | 98.1% | 54.7% |
| 3purA01 | 3.30.40.10 | Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) | 0.52 | 41.0 | 3.73e-01 | 88.5% | 79.7% |
| 3c9fA01 | 3.60.21.10 | Alpha Beta › 4-Layer Sandwich › Purple Acid Phosphatase; chain A, domain 2 › Metallo-dependent phosphatases | 0.52 | 35.0 | 2.19e-01 | 71.2% | 24.5% |
| 3ffyA00 | 3.30.950.10 | Alpha Beta › 2-Layer Sandwich › Methyltransferase, Cobalt-precorrin-4 Transmethylase; Domain 2 › Tetrapyrrole methylase, C-terminal domain | 0.51 | 42.0 | 3.44e-01 | 100.0% | 93.8% |
| 5t17A00 | 3.30.1340.10 | Alpha Beta › 2-Layer Sandwich › Histidine-containing Protein; Chain: A; › HPr-like | 0.51 | 40.0 | 3.65e-01 | 100.0% | 77.6% |
| 1vkzA02 | 3.30.1490.20 | Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › ATP-grasp fold, A domain | 0.51 | 40.0 | 3.80e-01 | 100.0% | 98.6% |
| 2dl9A01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.51 | 39.0 | 3.47e-01 | 94.2% | 84.3% |
| 4bpuC00 | 3.90.920.10 | Alpha Beta › Alpha-Beta Complex › DNA primase, PRIM domain › DNA primase, PRIM domain | 0.51 | 39.0 | 2.42e-01 | 88.5% | 61.9% |
| 4xmqA01 | 3.30.450.20 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain | 0.51 | 40.0 | 3.16e-01 | 96.2% | 94.0% |
| 2id5D02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.51 | 40.0 | 3.46e-01 | 94.2% | 81.9% |
ECOD (19)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2876 | 101.1.14.2 ↗ | alpha arrays › HTH › HTH › DNA-binding domain of intron-encoded endonucleases › I-HmuI_NUMOD-like | 0.62 | 43.0 | 4.00e-01 | 75.0% | 79.7% |
| 3346140 | 221.1.1.0 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like | 0.62 | 52.0 | 4.36e-01 | 98.1% | 87.4% |
| 3971321 | 4.1.1.28 ↗ | beta barrels › SH3 › SH3 › SH3 › BPL_C | 0.61 | 49.0 | 4.54e-01 | 92.3% | 98.6% |
| 5053864 | 206.1.3.21 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › ATP-grasp › RimK | 0.61 | 53.0 | 3.69e-01 | 100.0% | 33.9% |
| 3373620 | 221.1.1.0 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like | 0.61 | 51.0 | 4.34e-01 | 98.1% | 85.6% |
| 4945544 | 7587.1.1.0 ↗ | a/b three-layered sandwiches › Rossmann-like domain in carbohydrate phosphatases › Rossmann-like domain in carbohydrate phosphatases › Rossmann-like domain in carbohydrate phosphatases | 0.59 | 49.0 | 3.83e-01 | 100.0% | 47.7% |
| 3630011 | 633.23.1.0 ↗ | alpha bundles › Bromodomain-like › Claudin › Claudin | 0.59 | 40.0 | 2.81e-01 | 73.1% | 71.1% |
| 3163824 | 4091.1.1.1 ↗ | beta complex topology › L,D-transpeptidase catalytic domain-like › L,D-transpeptidase catalytic domain-like › L,D-transpeptidase catalytic domain-like › YkuD | 0.59 | 47.0 | 3.12e-01 | 100.0% | 22.2% |
| 4887308 | 275.1.1.0 ↗ | a+b two layers › MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase › MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase › MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase | 0.59 | 48.0 | 4.70e-01 | 100.0% | 100.0% |
| 3556111 | 275.1.1.1 ↗ | a+b two layers › MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase › MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase › MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase › RNA_pol_Rpb1_2 | 0.56 | 44.0 | 4.29e-01 | 100.0% | 95.4% |
| 4486867 | 3351.1.1.0 ↗ | a/b three-layered sandwiches › Atg7 N-terminal domain-like › N-terminal domain in E1 enzyme Atg7 › N-terminal domain in E1 enzyme Atg7 | 0.55 | 40.0 | 3.30e-01 | 100.0% | 42.0% |
| 4031509 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.55 | 44.0 | 4.27e-01 | 94.2% | 98.3% |
| 4983428 | 210.1.3.5 ↗ | a+b four layers › Ntn/PP2C › Ntn › Class II glutamine amidotransferases › GATase_7 | 0.54 | 44.0 | 3.14e-01 | 100.0% | 32.8% |
| 5037556 | 2003.1.5.81 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_25 | 0.53 | 42.0 | 2.85e-01 | 96.2% | 78.8% |
| 3938764 | 2.1.1.37 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › OB_NTP_bind | 0.53 | 42.0 | 3.45e-01 | 86.5% | 64.2% |
| 3229211 | 11.1.1.179 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Ig_3 | 0.52 | 43.0 | 3.67e-01 | 98.1% | 83.3% |
| 4113243 | 223.1.1.0 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains | 0.51 | 40.0 | 2.94e-01 | 88.5% | 60.0% |
| 3726371 | 206.1.3.10 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › ATP-grasp › CPSase_L_D2 | 0.51 | 41.0 | 2.86e-01 | 100.0% | 31.8% |
| 4002587 | 221.1.1.0 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like | 0.50 | 39.0 | 3.68e-01 | 94.2% | 95.7% |