NC_013693.1__YP_003358601.1__phiSboM-AG3_gp114__00114

Bact-Vir

Identity

74.4 mean pLDDT

Heunggongvirae› Uroviricota› Caudoviricetes› Pantevenvirales› Ackermannviridae› Agtrevirus› Shigella_phage_Ag3

TaxID: 637730

Singleton — not in a non-trivial cluster

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high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 5-79

PDB

Domain cluster: representative

CATH (4)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
1ybyA02	2.40.50.140	Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins	0.61	29.0	3.16e-01	81.3%	50.0%
3g7gH00	2.40.160.20	Mainly Beta › Beta Barrel › Porin ›	0.53	40.0	3.19e-01	81.3%	57.9%
1l3iA00	3.40.50.150	Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39	0.53	38.0	2.83e-01	74.7%	37.8%
4grhA00	3.60.120.10	Alpha Beta › 4-Layer Sandwich › Anthranilate synthase › Anthranilate synthase	0.53	46.0	2.90e-01	100.0%	33.8%

ECOD (8)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
3584364	4.1.1.0 ↗	beta barrels › SH3 › SH3 › SH3	0.69	33.0	3.91e-01	80.0%	66.0%
3275404	4.1.1.0 ↗	beta barrels › SH3 › SH3 › SH3	0.66	33.0	3.62e-01	85.3%	58.3%
4968628	375.1.1.0 ↗	few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related	0.64	35.0	4.40e-01	96.0%	97.5%
3795223	4.1.1.0 ↗	beta barrels › SH3 › SH3 › SH3	0.63	34.0	3.24e-01	94.7%	44.7%
4002896	4.1.1.9 ↗	beta barrels › SH3 › SH3 › SH3 › TUDOR	0.55	34.0	3.25e-01	97.3%	53.3%
3580020	1.1.13.0 ↗	beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins	0.54	45.0	3.35e-01	93.3%	77.9%
4025700	304.9.1.0 ↗	a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD	0.52	36.0	3.17e-01	72.0%	56.4%
3845425	4.1.1.9 ↗	beta barrels › SH3 › SH3 › SH3 › TUDOR	0.50	34.0	3.23e-01	97.3%	58.9%