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YP_003591099.1

Arc-Vir

NC_014099__YP_003591099.1__STIV2-B66__00025

Identity

Accession:
NC_014099 ↗
Protein ID:
YP_003591099.1 ↗
Kingdom:
archaea

Quality

73.8 mean pLDDT

Taxonomy

Abadenavirae› Produgelaviricota› Belvinaviricetes› Belfryvirales› Turriviridae› Alphaturrivirus› Sulfolobus_turreted_icosahedral_virus_2

TaxID: 754004

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 5-65
PDB
Domain cluster: representative
CATH (12)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4hv0C00 1.10.1220.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant › Met repressor-like 0.72 43.0 3.83e-01 93.4% 41.6%
4rs8A00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.60 41.0 3.63e-01 70.5% 64.3%
2isyA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.60 42.0 3.35e-01 77.0% 98.6%
2p4wA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.59 41.0 3.34e-01 72.1% 56.3%
2f2eA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.58 39.0 3.38e-01 70.5% 60.4%
2d1hB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.57 48.0 4.07e-01 91.8% 73.5%
2x4hA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.56 42.0 3.21e-01 78.7% 65.1%
3urrA00 3.40.930.10 Alpha Beta › 3-Layer(aba) Sandwich › Mannitol-specific EII; Chain A › Mannitol-specific EII; Chain A 0.55 41.0 3.14e-01 82.0% 63.8%
3iwgA02 3.40.630.30 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) 0.53 39.0 3.04e-01 80.3% 66.7%
4b3hA03 1.10.1040.50 Mainly Alpha › Orthogonal Bundle › N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 › 0.52 40.0 2.76e-01 82.0% 93.9%
1xhcA02 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.52 35.0 2.95e-01 72.1% 40.7%
2i7xA02 3.40.50.10890 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.51 40.0 2.85e-01 86.9% 92.0%
ECOD (8)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3839132 2008.1.1.0 ↗ a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like 0.60 42.0 2.84e-01 72.1% 33.3%
4360311 7577.1.1.2 ↗ a/b three-layered sandwiches › PLP-dependent transferases › PLP-dependent transferases › PLP-dependent transferases › Aminotran_3 0.60 42.0 2.66e-01 85.2% 12.7%
3285724 101.1.2.26 ↗ alpha arrays › HTH › HTH › winged helix domain › HxlR 0.60 41.0 2.98e-01 70.5% 37.9%
4032512 101.1.2.6 ↗ alpha arrays › HTH › HTH › winged helix domain › GntR 0.58 39.0 3.54e-01 70.5% 60.0%
4632163 101.1.2.112 ↗ alpha arrays › HTH › HTH › winged helix domain › FtsK_gamma 0.53 33.0 3.17e-01 80.3% 55.9%
1267700 213.1.1.1 ↗ a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › Acetyltransf_1 0.52 39.0 3.12e-01 82.0% 72.4%
3088563 7577.1.1.1 ↗ a/b three-layered sandwiches › PLP-dependent transferases › PLP-dependent transferases › PLP-dependent transferases › Aminotran_1_2 0.51 43.0 2.83e-01 96.7% 45.6%
3285571 7577.1.1.1 ↗ a/b three-layered sandwiches › PLP-dependent transferases › PLP-dependent transferases › PLP-dependent transferases › Aminotran_1_2 0.51 44.0 2.90e-01 100.0% 44.7%