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NC_014260.1__YP_003734344.1__IME08_gp193__00194
Bact-VirNC_014260.1__YP_003734344.1__IME08_gp193__00194
Identity
- Accession:
- NC_014260 ↗
- Kingdom:
- phage
Quality
67.2
mean pLDDT
Taxonomy
Heunggongvirae›
Uroviricota›
Caudoviricetes›
Pantevenvirales›
Straboviridae›
Dhakavirus›
Escherichia_phage_IME08
TaxID: 698728
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 6-57
Domain cluster:
rep: phosphoprotein__YP_009362168__La_Joya_virus__1272946__D113-162
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF11097.14 best | DUF2883 | 67.3 | 1.50e-18 | 100.0% | 68.0% |
CATH (88)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3evzA01 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.81 | 63.0 | 4.38e-01 | 100.0% | 26.5% |
| 2kl8A00 | 3.30.70.600 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Ribosomal protein S10 | 0.80 | 65.0 | 5.55e-01 | 100.0% | 55.3% |
| 2iruA02 | 3.30.70.3300 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.80 | 67.0 | 4.97e-01 | 100.0% | 36.2% |
| 4gt8A00 | 3.30.565.10 | Alpha Beta › 2-Layer Sandwich › Heat Shock Protein 90 › Histidine kinase-like ATPase, C-terminal domain | 0.79 | 61.0 | 4.53e-01 | 84.6% | 34.6% |
| 4atnA03 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.78 | 68.0 | 4.70e-01 | 100.0% | 31.9% |
| 7qh2C03 | 3.30.70.2740 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.78 | 66.0 | 5.77e-01 | 100.0% | 62.8% |
| 1yrxC01 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.77 | 63.0 | 5.05e-01 | 100.0% | 46.2% |
| 4djbA00 | 3.30.70.2870 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Mastadenovirus E4 ORF3 | 0.76 | 65.0 | 5.07e-01 | 100.0% | 55.1% |
| 6u26A01 | 3.30.70.80 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Peptidase S8 propeptide/proteinase inhibitor I9 | 0.76 | 66.0 | 5.58e-01 | 100.0% | 60.2% |
| 2pt7G02 | 3.30.1370.180 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › | 0.76 | 57.0 | 5.26e-01 | 92.3% | 64.2% |
| 3tm4A01 | 3.30.2130.30 | Alpha Beta › 2-Layer Sandwich › VC0802-like › | 0.75 | 62.0 | 4.26e-01 | 100.0% | 25.9% |
| 1b24A01 | 3.10.28.10 | Alpha Beta › Roll › Endonuclease I-creI › Homing endonucleases | 0.75 | 63.0 | 5.24e-01 | 100.0% | 53.7% |
| 3hyiA01 | 3.10.28.10 | Alpha Beta › Roll › Endonuclease I-creI › Homing endonucleases | 0.75 | 58.0 | 3.93e-01 | 100.0% | 23.0% |
| 2gukA00 | 3.30.2190.10 | Alpha Beta › 2-Layer Sandwich › PG1857-like › PG1857-like | 0.75 | 56.0 | 4.34e-01 | 100.0% | 37.8% |
| 2ebbA00 | 3.30.1360.20 | Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › Transcriptional coactivator/pterin dehydratase | 0.74 | 66.0 | 5.38e-01 | 100.0% | 56.2% |
| 2x3gA00 | 3.30.70.1910 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.74 | 64.0 | 4.97e-01 | 100.0% | 44.8% |
| 3g8qA02 | 3.30.70.1940 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.73 | 62.0 | 5.48e-01 | 100.0% | 65.0% |
| 3cxjA00 | 3.30.1460.10 | Alpha Beta › 2-Layer Sandwich › Yope Regulator; Chain: A, › | 0.72 | 63.0 | 4.60e-01 | 100.0% | 50.0% |
| 3qwuA03 | 3.30.70.2160 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.72 | 57.0 | 4.34e-01 | 100.0% | 35.3% |
| 2ln3A00 | 3.30.110.140 | Alpha Beta › 2-Layer Sandwich › Translation Initiation Factor IF3 › | 0.71 | 63.0 | 5.39e-01 | 100.0% | 86.7% |
| 4kyzA00 | 3.30.70.600 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Ribosomal protein S10 | 0.71 | 60.0 | 4.29e-01 | 100.0% | 68.3% |
| 1dcoA00 | 3.30.1360.20 | Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › Transcriptional coactivator/pterin dehydratase | 0.71 | 62.0 | 5.07e-01 | 100.0% | 54.5% |
| 1dq3A04 | 3.10.28.10 | Alpha Beta › Roll › Endonuclease I-creI › Homing endonucleases | 0.71 | 57.0 | 4.46e-01 | 100.0% | 41.2% |
| 4v1al00 | 3.30.780.10 | Alpha Beta › 2-Layer Sandwich › Translation Initiation Factor Eif1 › SUI1-like domain | 0.71 | 56.0 | 4.20e-01 | 96.2% | 34.6% |
| 5mmjh01 | 3.30.1370.30 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › | 0.71 | 53.0 | 4.81e-01 | 100.0% | 58.7% |
| 3keyA02 | 3.30.1370.230 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › Stn1, C-terminal wHTH domain | 0.70 | 59.0 | 5.08e-01 | 100.0% | 73.9% |
| 2cveA02 | 3.30.70.240 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.70 | 51.0 | 4.72e-01 | 100.0% | 60.6% |
| 1usmA00 | 3.30.1360.20 | Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › Transcriptional coactivator/pterin dehydratase | 0.69 | 61.0 | 5.36e-01 | 100.0% | 71.4% |
| 1tkjA00 | 3.40.630.10 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Zn peptidases | 0.69 | 53.0 | 3.38e-01 | 86.5% | 16.2% |
| 1khmA00 | 3.30.1370.10 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › K Homology domain, type 1 | 0.69 | 58.0 | 4.92e-01 | 100.0% | 56.2% |
| 2nrqA00 | 3.30.1440.10 | Alpha Beta › 2-Layer Sandwich › 50s Ribosomal Protein L5; Chain: A, › Ribosomal protein L5 | 0.69 | 59.0 | 4.42e-01 | 100.0% | 43.1% |
| 4q5eA01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.69 | 55.0 | 5.01e-01 | 100.0% | 65.3% |
| 3go9A02 | 3.30.830.10 | Alpha Beta › 2-Layer Sandwich › Cytochrome Bc1 Complex; Chain A, domain 1 › Metalloenzyme, LuxS/M16 peptidase-like | 0.69 | 59.0 | 3.98e-01 | 100.0% | 33.2% |
| 1yj7B01 | 3.30.70.1530 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Hypothetical protein rpa1041 | 0.69 | 50.0 | 4.66e-01 | 100.0% | 60.6% |
| 2uvaG03 | 3.30.70.3320 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.68 | 56.0 | 4.43e-01 | 94.2% | 44.4% |
| 2yweA03 | 3.30.70.870 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Elongation Factor G (Translational Gtpase), domain 3 | 0.68 | 53.0 | 4.72e-01 | 98.1% | 58.5% |
| 2f1fA01 | 3.30.70.260 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain | 0.67 | 55.0 | 4.92e-01 | 100.0% | 63.3% |
| 2onlC01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.67 | 54.0 | 4.77e-01 | 100.0% | 59.3% |
| 2mzwA01 | 3.30.70.870 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Elongation Factor G (Translational Gtpase), domain 3 | 0.66 | 50.0 | 4.55e-01 | 96.2% | 59.2% |
| 4qmfB01 | 3.30.1370.10 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › K Homology domain, type 1 | 0.66 | 52.0 | 4.64e-01 | 100.0% | 59.8% |
| 1vdhA01 | 3.30.70.1030 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Apc35880; domain 1 | 0.66 | 48.0 | 3.69e-01 | 78.8% | 38.8% |
| 1m1hA01 | 3.30.70.940 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › NusG, N-terminal domain | 0.64 | 56.0 | 4.58e-01 | 100.0% | 55.0% |
| 1j4wA01 | 3.30.1370.10 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › K Homology domain, type 1 | 0.64 | 53.0 | 4.85e-01 | 100.0% | 74.3% |
| 3hz7A00 | 3.30.110.40 | Alpha Beta › 2-Layer Sandwich › Translation Initiation Factor IF3 › TusA-like domain | 0.64 | 56.0 | 5.07e-01 | 100.0% | 97.3% |
| 2if1A00 | 3.30.780.10 | Alpha Beta › 2-Layer Sandwich › Translation Initiation Factor Eif1 › SUI1-like domain | 0.64 | 47.0 | 3.69e-01 | 94.2% | 34.9% |
| 2crqA01 | 3.30.110.10 | Alpha Beta › 2-Layer Sandwich › Translation Initiation Factor IF3 › Translation initiation factor 3 (IF-3), C-terminal domain | 0.63 | 51.0 | 4.49e-01 | 98.1% | 62.8% |
| 2jzxA02 | 3.30.1370.10 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › K Homology domain, type 1 | 0.63 | 54.0 | 4.74e-01 | 100.0% | 64.6% |
| 2cpxA01 | 3.30.70.330 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain | 0.63 | 52.0 | 4.71e-01 | 100.0% | 67.1% |
| 2rrnA01 | 3.30.70.2040 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.63 | 53.0 | 4.65e-01 | 100.0% | 61.4% |
| 1tigA00 | 3.30.110.10 | Alpha Beta › 2-Layer Sandwich › Translation Initiation Factor IF3 › Translation initiation factor 3 (IF-3), C-terminal domain | 0.63 | 51.0 | 4.51e-01 | 100.0% | 59.1% |
| 7n0eB02 | 3.30.565.10 | Alpha Beta › 2-Layer Sandwich › Heat Shock Protein 90 › Histidine kinase-like ATPase, C-terminal domain | 0.63 | 48.0 | 3.75e-01 | 86.5% | 62.3% |
| 2g0iA00 | 3.30.70.1490 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Cysteine protease Prp | 0.62 | 51.0 | 4.17e-01 | 100.0% | 55.9% |
| 2n8lA00 | 3.30.310.210 | Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › | 0.62 | 50.0 | 3.52e-01 | 100.0% | 26.7% |
| 1jw3A00 | 3.55.10.10 | Alpha Beta › 3-Layer(bab) Sandwich › Archease, Possible Chaperone; Chain: A; domain 1 › Archease domain | 0.61 | 51.0 | 3.89e-01 | 100.0% | 90.7% |
| 2zzeA04 | 3.30.980.10 | Alpha Beta › 2-Layer Sandwich › Threonyl-tRNA Synthetase; Chain A, domain 2 › Threonyl-trna Synthetase; Chain A, domain 2 | 0.61 | 53.0 | 4.37e-01 | 98.1% | 89.5% |
| 5w2fA01 | 3.30.780.10 | Alpha Beta › 2-Layer Sandwich › Translation Initiation Factor Eif1 › SUI1-like domain | 0.61 | 46.0 | 4.11e-01 | 96.2% | 54.7% |
| 2nvmA00 | 3.30.310.110 | Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › XisI-like | 0.61 | 46.0 | 3.72e-01 | 84.6% | 43.3% |
| 1tuwA00 | 3.30.70.1090 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Dimeric alpha+beta barrel. | 0.60 | 48.0 | 4.05e-01 | 100.0% | 50.0% |
| 3zxoA00 | 3.30.565.10 | Alpha Beta › 2-Layer Sandwich › Heat Shock Protein 90 › Histidine kinase-like ATPase, C-terminal domain | 0.60 | 49.0 | 3.90e-01 | 100.0% | 42.4% |
| 1wjwA01 | 3.30.310.50 | Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › Alpha-D-phosphohexomutase, C-terminal domain | 0.60 | 48.0 | 4.29e-01 | 100.0% | 74.1% |
| 4gs5A02 | 3.30.300.30 | Alpha Beta › 2-Layer Sandwich › GMP Synthetase; Chain A, domain 3 › ANL, C-terminal domain | 0.59 | 45.0 | 3.75e-01 | 90.4% | 52.4% |
| 1i5eA00 | 3.40.50.2020 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.59 | 52.0 | 3.44e-01 | 98.1% | 79.8% |
| 3pqvC01 | 3.65.10.20 | Alpha Beta › Alpha-beta prism › UDP-n-acetylglucosamine1-carboxyvinyl-transferase; Chain › RNA 3'-terminal phosphate cyclase domain | 0.59 | 48.0 | 3.22e-01 | 100.0% | 34.9% |
| 4qpkB02 | 3.30.565.10 | Alpha Beta › 2-Layer Sandwich › Heat Shock Protein 90 › Histidine kinase-like ATPase, C-terminal domain | 0.59 | 42.0 | 3.30e-01 | 84.6% | 32.1% |
| 4dzrA00 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.59 | 47.0 | 3.46e-01 | 98.1% | 87.7% |
| 3p9aF00 | 1.10.132.80 | Mainly Alpha › Orthogonal Bundle › Topoisomerase I; Chain A, domain 4 › | 0.57 | 47.0 | 3.53e-01 | 90.4% | 73.1% |
| 5e1wA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.57 | 43.0 | 3.05e-01 | 82.7% | 68.5% |
| 2p92A00 | 3.30.70.1490 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Cysteine protease Prp | 0.56 | 46.0 | 3.92e-01 | 100.0% | 54.7% |
| 4kt5C00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.56 | 49.0 | 4.13e-01 | 100.0% | 63.6% |
| 2nq2D00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.56 | 45.0 | 3.02e-01 | 98.1% | 25.0% |
| 4npjB01 | 2.60.40.150 | Mainly Beta › Sandwich › Immunoglobulin-like › C2 domain | 0.55 | 38.0 | 2.81e-01 | 73.1% | 50.0% |
| 1fpqA02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.55 | 47.0 | 3.63e-01 | 100.0% | 45.0% |
| 3l9fA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.55 | 48.0 | 4.06e-01 | 100.0% | 69.7% |
| 4evuB00 | 3.30.1660.10 | Alpha Beta › 2-Layer Sandwich › Dodecin subunit-like › Flavin-binding protein dodecin | 0.55 | 45.0 | 4.24e-01 | 100.0% | 75.0% |
| 5hvqC01 | 3.90.1150.220 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › | 0.54 | 46.0 | 4.07e-01 | 100.0% | 78.8% |
| 1yyvB00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.54 | 46.0 | 3.67e-01 | 100.0% | 47.3% |
| 1s12A00 | 3.30.70.1490 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Cysteine protease Prp | 0.54 | 41.0 | 3.61e-01 | 100.0% | 52.1% |
| 4cbgD02 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.54 | 44.0 | 3.14e-01 | 92.3% | 39.8% |
| 5hs7B00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.53 | 47.0 | 3.82e-01 | 100.0% | 56.1% |
| 4dzdA01 | 3.30.70.1200 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Crispr-associated protein; domain 1 | 0.53 | 43.0 | 4.01e-01 | 100.0% | 71.4% |
| 1kyzA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.53 | 46.0 | 3.71e-01 | 100.0% | 54.4% |
| 1k8kA04 | 3.90.640.10 | Alpha Beta › Alpha-Beta Complex › Actin; Chain A, domain 4 › ATPase, substrate binding domain, subdomain 4 | 0.53 | 38.0 | 3.26e-01 | 80.8% | 59.8% |
| 3l7wA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.52 | 44.0 | 3.59e-01 | 100.0% | 56.2% |
| 5dymA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.52 | 45.0 | 3.73e-01 | 100.0% | 65.6% |
| 1e3mA01 | 3.40.1170.10 | Alpha Beta › 3-Layer(aba) Sandwich › MutS, DNA mismatch repair protein, domain I › DNA repair protein MutS, domain I | 0.51 | 40.0 | 3.28e-01 | 98.1% | 78.0% |
| 2p4wA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.51 | 46.0 | 3.66e-01 | 100.0% | 74.8% |
| 1ub9A00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.51 | 41.0 | 3.49e-01 | 100.0% | 55.0% |
| 2dqlA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.50 | 44.0 | 3.44e-01 | 100.0% | 53.0% |
ECOD (94)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4943463 | 304.43.1.0 ↗ | a+b two layers › Alpha-beta plaits › Hypothetical protein TT1725 › Hypothetical protein TT1725 | 0.93 | 78.0 | 6.13e-01 | 100.0% | 47.0% |
| 3477897 | 304.44.1.0 ↗ | a+b two layers › Alpha-beta plaits › Ribosomal protein S10 › Ribosomal protein S10 | 0.81 | 69.0 | 5.79e-01 | 100.0% | 55.6% |
| 3929061 | 4955.1.1.0 ↗ | a+b two layers › permuted ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit › permuted ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit › permuted ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit | 0.81 | 71.0 | 5.83e-01 | 100.0% | 68.4% |
| 3898738 | 304.110.1.1 ↗ | a+b two layers › Alpha-beta plaits › Acylphosphatase-like › Acylphosphatase-like › Acylphosphatase | 0.80 | 61.0 | 5.44e-01 | 100.0% | 58.7% |
| 4153241 | 242.1.1.7 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_3 | 0.78 | 68.0 | 5.44e-01 | 100.0% | 54.3% |
| 3603739 | 101.1.1.498 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › LAGLIDADG_3 | 0.77 | 66.0 | 4.06e-01 | 100.0% | 18.2% |
| 3417366 | 312.1.1.19 ↗ | a+b three layers › HIT-like › HIT-related › HIT-related › PF26216 | 0.77 | 68.0 | 4.96e-01 | 100.0% | 64.3% |
| 4992480 | 242.1.1.0 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases | 0.77 | 60.0 | 5.04e-01 | 100.0% | 50.0% |
| 352463 | 304.7.1.2 ↗ | a+b two layers › Alpha-beta plaits › Protease propeptides/inhibitors › Protease propeptides/inhibitors › Inhibitor_I9 | 0.76 | 67.0 | 5.57e-01 | 100.0% | 57.0% |
| 4931923 | 304.5.1.7 ↗ | a+b two layers › Alpha-beta plaits › GlnB-like › GlnB-like › DUF2179 | 0.76 | 57.0 | 4.93e-01 | 100.0% | 52.5% |
| 4659154 | 242.1.1.7 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_3 | 0.76 | 65.0 | 4.70e-01 | 100.0% | 37.4% |
| 4497258 | 242.1.1.7 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_3 | 0.76 | 64.0 | 4.67e-01 | 100.0% | 36.8% |
| 3519958 | 327.11.2.0 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) | 0.76 | 69.0 | 6.21e-01 | 100.0% | 77.1% |
| 3602264 | 242.1.1.7 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_3 | 0.76 | 61.0 | 5.16e-01 | 100.0% | 54.1% |
| 4997522 | 304.12.1.0 ↗ | a+b two layers › Alpha-beta plaits › Ribosomal protein S6 › Ribosomal protein S6 | 0.75 | 62.0 | 5.51e-01 | 100.0% | 62.5% |
| 3415465 | 320.1.1.1 ↗ | a+b two layers › R3H domain-like › R3H domain › R3H domain › R3H | 0.75 | 60.0 | 5.15e-01 | 98.1% | 55.3% |
| 3730662 | 304.4.1.0 ↗ | a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel | 0.74 | 63.0 | 5.20e-01 | 100.0% | 55.0% |
| 139956 | 304.8.1.16 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › 117-like_vir | 0.74 | 64.0 | 4.97e-01 | 100.0% | 44.8% |
| 5023983 | 304.130.1.1 ↗ | a+b two layers › Alpha-beta plaits › Uncharacterized protein MK0293 N-terminal domain › Uncharacterized protein MK0293 N-terminal domain › Ni_insertion | 0.74 | 64.0 | 5.20e-01 | 100.0% | 53.0% |
| 3519959 | 327.11.2.0 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) | 0.74 | 57.0 | 5.34e-01 | 100.0% | 69.2% |
| 3732290 | 304.4.1.0 ↗ | a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel | 0.74 | 62.0 | 5.22e-01 | 100.0% | 57.9% |
| 4627709 | 304.120.1.2 ↗ | a+b two layers › Alpha-beta plaits › Ferredoxin-like domain in ThiI › Ferredoxin-like domain in ThiI › RlmM_FDX | 0.74 | 59.0 | 5.38e-01 | 100.0% | 67.1% |
| 4946421 | 2004.1.1.120 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ResIII | 0.74 | 62.0 | 3.45e-01 | 98.1% | 7.3% |
| 3965385 | 304.14.1.1 ↗ | a+b two layers › Alpha-beta plaits › Sporulation related repeat (SPOR) › Sporulation related repeat (SPOR) › SPOR | 0.73 | 58.0 | 5.32e-01 | 100.0% | 65.7% |
| 5005033 | 304.39.1.0 ↗ | a+b two layers › Alpha-beta plaits › Mechanosensitive channel protein MscS (YggB), C-terminal domain › Mechanosensitive channel protein MscS (YggB), C-terminal domain | 0.73 | 61.0 | 5.42e-01 | 100.0% | 65.0% |
| 4953987 | 241.1.1.5 ↗ | a+b two layers › Type III secretory system chaperone-like › Type III secretory system chaperone › Type III secretory system chaperone › DUF2299 | 0.73 | 64.0 | 4.63e-01 | 100.0% | 49.7% |
| 4806761 | 2002.1.1.0 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels | 0.73 | 56.0 | 4.55e-01 | 96.2% | 42.9% |
| 4274495 | 246.3.1.2 ↗ | a+b four layers › Carbon-nitrogen hydrolase-like › DNase I-like › DNase I-like › RNase_E_G | 0.73 | 61.0 | 4.70e-01 | 98.1% | 41.7% |
| 4130731 | 242.1.1.7 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_3 | 0.72 | 61.0 | 4.48e-01 | 100.0% | 38.7% |
| 3265590 | 2003.1.5.0 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases | 0.72 | 61.0 | 4.03e-01 | 100.0% | 23.6% |
| 3381288 | 304.24.1.0 ↗ | a+b two layers › Alpha-beta plaits › EF-G C-terminal domain-like › EF-G C-terminal domain-like | 0.71 | 57.0 | 4.94e-01 | 98.1% | 56.5% |
| 5046778 | 304.130.1.1 ↗ | a+b two layers › Alpha-beta plaits › Uncharacterized protein MK0293 N-terminal domain › Uncharacterized protein MK0293 N-terminal domain › Ni_insertion | 0.71 | 62.0 | 5.03e-01 | 100.0% | 53.0% |
| 3288688 | 304.43.1.1 ↗ | a+b two layers › Alpha-beta plaits › Hypothetical protein TT1725 › Hypothetical protein TT1725 › DUF503 | 0.71 | 60.0 | 5.01e-01 | 100.0% | 65.3% |
| 4165721 | 304.8.1.21 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › ACT_9 | 0.70 | 57.0 | 5.32e-01 | 100.0% | 71.4% |
| 4063927 | 304.24.1.1 ↗ | a+b two layers › Alpha-beta plaits › EF-G C-terminal domain-like › EF-G C-terminal domain-like › EFG_C | 0.70 | 56.0 | 3.88e-01 | 96.2% | 25.3% |
| 3173046 | 304.162.1.2 ↗ | a+b two layers › Alpha-beta plaits › Competence or damage-inducible protein CinA middle domain › Competence or damage-inducible protein CinA middle domain › FLAD1_M | 0.70 | 59.0 | 5.06e-01 | 100.0% | 60.7% |
| 5022357 | 242.1.1.0 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases | 0.70 | 54.0 | 5.22e-01 | 100.0% | 75.0% |
| 4439160 | 304.8.1.21 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › ACT_9 | 0.70 | 58.0 | 5.48e-01 | 100.0% | 76.9% |
| 5049638 | 304.8.1.0 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like | 0.70 | 55.0 | 5.30e-01 | 100.0% | 78.3% |
| 2533026 | 304.159.1.1 ↗ | a+b two layers › Alpha-beta plaits › Alpha-beta plait domain in NisB › Alpha-beta plait domain in NisB › Lant_dehydr_C | 0.70 | 59.0 | 4.78e-01 | 100.0% | 47.7% |
| 3512956 | 3914.1.1.11 ↗ | alpha bundles › TMEM16 lipid scramblase transmembrane domain › TMEM16 lipid scramblase transmembrane domain › TMEM16 lipid scramblase transmembrane domain › Anoct_dimer | 0.70 | 59.0 | 5.11e-01 | 100.0% | 60.7% |
| 4098328 | 304.24.1.3 ↗ | a+b two layers › Alpha-beta plaits › EF-G C-terminal domain-like › EF-G C-terminal domain-like › EFG_III | 0.70 | 55.0 | 4.47e-01 | 96.2% | 43.6% |
| 4943823 | 304.162.1.0 ↗ | a+b two layers › Alpha-beta plaits › Competence or damage-inducible protein CinA middle domain › Competence or damage-inducible protein CinA middle domain | 0.70 | 59.0 | 5.23e-01 | 100.0% | 65.0% |
| 3970164 | 330.10.1.0 ↗ | a+b two layers › dsRBD-like › Heterocyclase TruD C-terminal domain › Heterocyclase TruD C-terminal domain | 0.70 | 60.0 | 4.27e-01 | 100.0% | 45.0% |
| 5057183 | 242.1.1.0 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases | 0.69 | 60.0 | 4.97e-01 | 100.0% | 54.7% |
| 4945658 | 3501.1.1.0 ↗ | a+b two layers › protein PCC1 › protein PCC1 › protein PCC1 | 0.69 | 56.0 | 4.91e-01 | 100.0% | 59.0% |
| 3521944 | 327.11.2.26 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) › KH_N4BP1_1st | 0.69 | 54.0 | 5.00e-01 | 100.0% | 67.1% |
| 3725626 | 327.11.2.41 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) › PF26657 | 0.69 | 55.0 | 5.21e-01 | 100.0% | 73.8% |
| 4978118 | 241.1.1.5 ↗ | a+b two layers › Type III secretory system chaperone-like › Type III secretory system chaperone › Type III secretory system chaperone › DUF2299 | 0.68 | 58.0 | 4.21e-01 | 100.0% | 46.5% |
| 3617948 | 304.9.1.1 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD › RRM_1 | 0.68 | 57.0 | 4.62e-01 | 100.0% | 49.1% |
| 4941921 | 304.120.1.0 ↗ | a+b two layers › Alpha-beta plaits › Ferredoxin-like domain in ThiI › Ferredoxin-like domain in ThiI | 0.68 | 56.0 | 5.09e-01 | 98.1% | 67.1% |
| 4068249 | 331.2.1.1 ↗ | a+b two layers › TBP-like › Phosphoglucomutase, C-terminal domain › Phosphoglucomutase, C-terminal domain › PGM_PMM_IV | 0.67 | 56.0 | 4.99e-01 | 100.0% | 67.5% |
| 3365319 | 3012.1.1.11 ↗ | a+b two layers › Cof C2 cap domain › Cof C2 cap domain › Cof C2 cap domain › PF27677 | 0.67 | 54.0 | 4.84e-01 | 96.2% | 63.7% |
| 3927592 | 304.9.1.0 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD | 0.67 | 56.0 | 4.32e-01 | 100.0% | 41.5% |
| 3503198 | 3914.1.1.2 ↗ | alpha bundles › TMEM16 lipid scramblase transmembrane domain › TMEM16 lipid scramblase transmembrane domain › TMEM16 lipid scramblase transmembrane domain › Anoctamin,Anoct_dimer | 0.67 | 57.0 | 3.28e-01 | 100.0% | 10.8% |
| 3195325 | 304.162.1.2 ↗ | a+b two layers › Alpha-beta plaits › Competence or damage-inducible protein CinA middle domain › Competence or damage-inducible protein CinA middle domain › FLAD1_M | 0.67 | 56.0 | 4.96e-01 | 100.0% | 66.3% |
| 5041224 | 306.2.1.0 ↗ | a+b two layers › Glucose permease domain IIB-like › arginine repressor C terminal domain-related › C-terminal domain of arginine repressor | 0.66 | 57.0 | 4.91e-01 | 100.0% | 61.2% |
| 4523274 | 304.24.1.1 ↗ | a+b two layers › Alpha-beta plaits › EF-G C-terminal domain-like › EF-G C-terminal domain-like › EFG_C | 0.66 | 56.0 | 3.88e-01 | 100.0% | 26.7% |
| 3724442 | 327.11.2.0 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) | 0.66 | 56.0 | 5.18e-01 | 100.0% | 77.1% |
| 4629319 | 304.55.1.13 ↗ | a+b two layers › Alpha-beta plaits › Origin of replication-binding domains › Origin of replication-binding domains › Relaxase | 0.66 | 56.0 | 4.41e-01 | 100.0% | 45.8% |
| 3969151 | 304.14.1.1 ↗ | a+b two layers › Alpha-beta plaits › Sporulation related repeat (SPOR) › Sporulation related repeat (SPOR) › SPOR | 0.66 | 56.0 | 4.97e-01 | 100.0% | 68.8% |
| 3200904 | 304.162.1.2 ↗ | a+b two layers › Alpha-beta plaits › Competence or damage-inducible protein CinA middle domain › Competence or damage-inducible protein CinA middle domain › FLAD1_M | 0.66 | 55.0 | 5.02e-01 | 100.0% | 70.7% |
| 3494851 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.66 | 53.0 | 4.60e-01 | 96.2% | 83.3% |
| 3211626 | 304.162.1.2 ↗ | a+b two layers › Alpha-beta plaits › Competence or damage-inducible protein CinA middle domain › Competence or damage-inducible protein CinA middle domain › FLAD1_M | 0.65 | 54.0 | 4.76e-01 | 100.0% | 64.7% |
| 3924938 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.65 | 52.0 | 4.37e-01 | 100.0% | 49.0% |
| 3196489 | 328.7.1.1 ↗ | a+b two layers › IF3-like › Smr domain › Smr domain › Smr | 0.65 | 54.0 | 4.40e-01 | 100.0% | 48.2% |
| 3499766 | 3914.1.1.0 ↗ | alpha bundles › TMEM16 lipid scramblase transmembrane domain › TMEM16 lipid scramblase transmembrane domain › TMEM16 lipid scramblase transmembrane domain | 0.65 | 55.0 | 3.05e-01 | 100.0% | 7.2% |
| 4029253 | 327.11.2.0 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) | 0.65 | 49.0 | 4.60e-01 | 100.0% | 65.7% |
| 3952812 | 304.4.1.0 ↗ | a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel | 0.64 | 52.0 | 4.57e-01 | 100.0% | 62.2% |
| 3204194 | 101.1.2.86 ↗ | alpha arrays › HTH › HTH › winged helix domain › SMC_Nse1 | 0.64 | 53.0 | 4.49e-01 | 100.0% | 76.8% |
| 3940990 | 327.11.2.0 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) | 0.63 | 50.0 | 4.68e-01 | 100.0% | 71.4% |
| 3332888 | 101.1.2.86 ↗ | alpha arrays › HTH › HTH › winged helix domain › SMC_Nse1 | 0.63 | 52.0 | 4.65e-01 | 94.2% | 81.3% |
| 4538961 | 304.14.1.1 ↗ | a+b two layers › Alpha-beta plaits › Sporulation related repeat (SPOR) › Sporulation related repeat (SPOR) › SPOR | 0.63 | 52.0 | 4.74e-01 | 100.0% | 77.3% |
| 3396525 | 327.11.2.20 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) › BICC1_KH | 0.63 | 51.0 | 4.70e-01 | 100.0% | 73.3% |
| 3396990 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.62 | 49.0 | 4.43e-01 | 94.2% | 85.0% |
| 3487955 | 327.11.2.0 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) | 0.62 | 51.0 | 4.55e-01 | 100.0% | 63.7% |
| 3223461 | 304.8.1.0 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like | 0.62 | 51.0 | 4.58e-01 | 100.0% | 70.0% |
| 4330210 | 327.6.1.6 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › Fe-S cluster assembly (FSCA) domain-like › Fe-S cluster assembly (FSCA) domain-like › Secretin | 0.62 | 47.0 | 3.05e-01 | 98.1% | 16.7% |
| 4991352 | 2002.1.1.120 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM | 0.61 | 51.0 | 3.30e-01 | 100.0% | 27.4% |
| 3839430 | 331.2.1.1 ↗ | a+b two layers › TBP-like › Phosphoglucomutase, C-terminal domain › Phosphoglucomutase, C-terminal domain › PGM_PMM_IV | 0.61 | 48.0 | 4.46e-01 | 100.0% | 66.7% |
| 4974589 | 3501.1.1.1 ↗ | a+b two layers › protein PCC1 › protein PCC1 › protein PCC1 › Pcc1 | 0.61 | 49.0 | 4.36e-01 | 100.0% | 63.1% |
| 3388222 | 331.2.1.1 ↗ | a+b two layers › TBP-like › Phosphoglucomutase, C-terminal domain › Phosphoglucomutase, C-terminal domain › PGM_PMM_IV | 0.60 | 50.0 | 4.59e-01 | 100.0% | 73.3% |
| 4972691 | 304.5.1.0 ↗ | a+b two layers › Alpha-beta plaits › GlnB-like › GlnB-like | 0.60 | 51.0 | 4.22e-01 | 100.0% | 86.0% |
| 3848891 | 304.151.1.6 ↗ | a+b two layers › Alpha-beta plaits › Ferredoxin-like domain of receptor-type protein tyrosine phosphatase › Ferredoxin-like domain of receptor-type protein tyrosine phosphatase › PF29952 | 0.60 | 48.0 | 4.08e-01 | 98.1% | 54.0% |
| 3968643 | 241.1.1.8 ↗ | a+b two layers › Type III secretory system chaperone-like › Type III secretory system chaperone › Type III secretory system chaperone › DUF2170 | 0.60 | 49.0 | 3.78e-01 | 100.0% | 48.1% |
| 3503756 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.59 | 48.0 | 4.51e-01 | 98.1% | 94.3% |
| 3481585 | 304.9.1.0 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD | 0.59 | 49.0 | 4.24e-01 | 100.0% | 61.1% |
| 3797522 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.57 | 47.0 | 3.97e-01 | 100.0% | 60.0% |
| 3249790 | 4081.1.1.2 ↗ | beta sandwiches › Baculovirus p35 protein-related › Baculovirus p35 protein-related › Baculovirus p35 protein-related › VIT | 0.56 | 45.0 | 3.09e-01 | 100.0% | 43.5% |
| 3766984 | 304.120.1.15 ↗ | a+b two layers › Alpha-beta plaits › Ferredoxin-like domain in ThiI › Ferredoxin-like domain in ThiI › PF29952 | 0.55 | 43.0 | 3.78e-01 | 100.0% | 56.8% |
| 4099004 | 306.4.1.1 ↗ | a+b two layers › Glucose permease domain IIB-like › YggU-like › YggU-like › DUF167 | 0.52 | 41.0 | 3.56e-01 | 100.0% | 71.0% |
| 3894542 | 11.1.1.978 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › PF29952 | 0.51 | 40.0 | 3.56e-01 | 100.0% | 60.0% |
| 3347818 | 101.1.2.529 ↗ | alpha arrays › HTH › HTH › winged helix domain › DUF7599 | 0.51 | 44.0 | 3.92e-01 | 100.0% | 74.7% |
| 3898704 | 304.151.1.6 ↗ | a+b two layers › Alpha-beta plaits › Ferredoxin-like domain of receptor-type protein tyrosine phosphatase › Ferredoxin-like domain of receptor-type protein tyrosine phosphatase › PF29952 | 0.51 | 40.0 | 3.50e-01 | 100.0% | 60.0% |