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NC_014636.1__YP_003969314.1__phiAS5_ORF0025__00025

Bact-Vir

NC_014636.1__YP_003969314.1__phiAS5_ORF0025__00025

Identity

Accession:
NC_014636 ↗
Kingdom:
phage

Quality

89.4 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 4-60
PDB
Domain cluster: representative
CATH (46)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4izzB02 1.10.10.1680 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › HetR, N-terminal DNA-binding domain 0.90 65.0 6.08e-01 75.4% 67.6%
3vfzB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.86 66.0 6.44e-01 82.5% 84.1%
6g1dA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.86 60.0 5.29e-01 73.7% 52.4%
3p7nA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.86 60.0 5.53e-01 73.7% 59.7%
6uglB02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.85 59.0 5.87e-01 71.9% 72.4%
3hugA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.85 67.0 5.99e-01 86.0% 63.7%
1a04A02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.85 60.0 5.27e-01 73.7% 53.8%
1s7oB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.84 72.0 5.74e-01 91.2% 51.4%
3ulqB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.84 59.0 5.95e-01 73.7% 74.1%
5y9sC01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.84 59.0 5.18e-01 73.7% 52.4%
1rr7A02 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.84 57.0 6.11e-01 73.7% 83.3%
2esnA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.84 59.0 5.03e-01 73.7% 48.3%
6v7xB02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.83 58.0 5.91e-01 73.7% 76.8%
1j1vA00 1.10.1750.10 Mainly Alpha › Orthogonal Bundle › Chromosomal Replication Initiator Protein Dnaa; Chain: A; › DnaA protein, C-terminal DNA-binding domain 0.83 60.0 5.07e-01 77.2% 50.0%
1p4wA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.81 57.0 4.91e-01 73.7% 49.4%
3szpA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.80 56.0 4.82e-01 73.7% 48.3%
2w48B01 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.80 58.0 6.10e-01 77.2% 86.5%
6jqsA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.79 55.0 5.28e-01 73.7% 64.2%
2jn6A01 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.79 54.0 4.73e-01 71.9% 49.4%
5dukB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.77 53.0 5.02e-01 71.9% 61.2%
1l3lA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.77 54.0 5.22e-01 73.7% 68.3%
4ijaA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.76 52.0 5.07e-01 71.9% 65.1%
2z99A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.75 56.0 4.82e-01 78.9% 56.3%
1fc3B00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.75 58.0 4.80e-01 84.2% 60.4%
1g3nC01 1.10.472.10 Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like 0.75 62.0 4.78e-01 89.5% 81.7%
2lvsA01 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.75 55.0 5.56e-01 77.2% 80.4%
5y2vC01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.75 66.0 5.74e-01 96.5% 98.8%
1sfxB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.74 53.0 4.28e-01 75.4% 88.5%
4rocA01 1.10.472.10 Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like 0.73 53.0 4.33e-01 77.2% 64.1%
2w9zA01 1.10.472.10 Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like 0.73 61.0 4.67e-01 94.7% 61.7%
2nyxB01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.72 50.0 3.68e-01 71.9% 28.9%
2e7xA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.72 53.0 5.51e-01 77.2% 88.5%
4pcqA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.72 51.0 5.44e-01 75.4% 90.0%
6kf9G01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.71 49.0 4.30e-01 71.9% 64.6%
4pxoA02 1.20.1050.10 Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › 0.71 55.0 4.23e-01 91.2% 37.4%
2cfxA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.70 50.0 5.32e-01 75.4% 92.0%
5y6iA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.70 51.0 4.67e-01 77.2% 76.7%
3fxqB01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.70 58.0 4.96e-01 91.2% 94.4%
4rs8A00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.68 50.0 4.35e-01 77.2% 70.2%
3lmmB05 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.68 47.0 4.60e-01 71.9% 73.8%
3u5ei01 1.10.10.1760 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Ribosomal protein L36 0.68 50.0 4.75e-01 78.9% 74.6%
1fi2A00 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.65 47.0 3.17e-01 75.4% 57.2%
2r8qA00 1.10.1300.10 Mainly Alpha › Orthogonal Bundle › Catalytic domain of cyclic nucleotide phosphodiesterase 4b2b › 3'5'-cyclic nucleotide phosphodiesterase, catalytic domain 0.63 51.0 3.14e-01 87.7% 28.7%
3ecoB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.60 49.0 3.95e-01 98.2% 71.3%
1r4wA01 3.40.30.10 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin 0.53 39.0 2.80e-01 84.2% 36.5%
2jvwA01 1.10.720.30 Mainly Alpha › Orthogonal Bundle › Transcription Termination Factor Rho, Rna-binding Domain; Chain A, Domain 1 › SAP domain 0.53 37.0 3.68e-01 73.7% 75.0%
ECOD (58)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4141845 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.95 64.0 6.57e-01 75.4% 72.7%
3165428 101.1.1.43 alpha arrays › HTH › HTH › Three-helical HTH › Mor 0.91 74.0 7.02e-01 86.0% 75.4%
4347676 101.1.6.4 alpha arrays › HTH › HTH › TrpR › Bac_DnaA_C 0.90 67.0 5.59e-01 77.2% 51.1%
4982076 101.1.3.0 alpha arrays › HTH › HTH › tetra-helical, LuxR-like 0.88 78.0 5.73e-01 96.5% 51.4%
4197050 101.1.6.4 alpha arrays › HTH › HTH › TrpR › Bac_DnaA_C 0.88 64.0 5.13e-01 77.2% 43.8%
3972217 101.1.2.1 alpha arrays › HTH › HTH › winged helix domain › HTH_1 0.87 61.0 5.19e-01 73.7% 47.8%
4032354 101.1.2.1 alpha arrays › HTH › HTH › winged helix domain › HTH_1 0.87 61.0 5.17e-01 73.7% 47.8%
4258153 101.1.1.43 alpha arrays › HTH › HTH › Three-helical HTH › Mor 0.87 67.0 6.88e-01 82.5% 85.5%
4009354 101.1.2.1 alpha arrays › HTH › HTH › winged helix domain › HTH_1 0.87 61.0 5.16e-01 73.7% 47.8%
4605333 101.1.2.1 alpha arrays › HTH › HTH › winged helix domain › HTH_1 0.87 61.0 5.26e-01 73.7% 50.6%
4370821 101.1.2.1 alpha arrays › HTH › HTH › winged helix domain › HTH_1 0.87 61.0 5.25e-01 73.7% 50.6%
3966995 101.1.2.1 alpha arrays › HTH › HTH › winged helix domain › HTH_1 0.86 61.0 5.13e-01 73.7% 47.8%
3942639 101.1.2.1 alpha arrays › HTH › HTH › winged helix domain › HTH_1 0.86 61.0 5.13e-01 73.7% 47.8%
3503859 101.1.1.52 alpha arrays › HTH › HTH › Three-helical HTH › BrkDBD 0.86 59.0 6.07e-01 73.7% 74.5%
3290297 101.1.2.1 alpha arrays › HTH › HTH › winged helix domain › HTH_1 0.85 60.0 5.30e-01 73.7% 53.8%
3250165 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.85 59.0 5.78e-01 75.4% 68.3%
3981659 101.1.2.1 alpha arrays › HTH › HTH › winged helix domain › HTH_1 0.85 60.0 5.06e-01 73.7% 47.8%
3941182 101.1.1.52 alpha arrays › HTH › HTH › Three-helical HTH › BrkDBD 0.85 58.0 5.57e-01 73.7% 63.1%
2831957 101.1.2.1 alpha arrays › HTH › HTH › winged helix domain › HTH_1 0.84 59.0 5.04e-01 73.7% 48.3%
3986748 101.1.2.1 alpha arrays › HTH › HTH › winged helix domain › HTH_1 0.84 59.0 5.02e-01 73.7% 47.8%
3509240 101.1.1.24 alpha arrays › HTH › HTH › Three-helical HTH › CENP-B_N 0.84 58.0 5.51e-01 75.4% 63.1%
3224978 101.1.1.52 alpha arrays › HTH › HTH › Three-helical HTH › BrkDBD 0.84 58.0 5.41e-01 75.4% 60.3%
4148347 101.1.1.26 alpha arrays › HTH › HTH › Three-helical HTH › UPF0122 0.83 69.0 5.54e-01 89.5% 51.9%
3527457 101.1.1.52 alpha arrays › HTH › HTH › Three-helical HTH › BrkDBD 0.83 57.0 5.84e-01 75.4% 74.5%
3999777 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.83 56.0 6.17e-01 75.4% 88.9%
3978224 101.1.2.1 alpha arrays › HTH › HTH › winged helix domain › HTH_1 0.83 58.0 4.94e-01 73.7% 47.8%
3618452 101.1.1.52 alpha arrays › HTH › HTH › Three-helical HTH › BrkDBD 0.83 57.0 5.81e-01 73.7% 74.5%
3945690 101.1.2.1 alpha arrays › HTH › HTH › winged helix domain › HTH_1 0.82 58.0 4.92e-01 73.7% 47.8%
3977861 101.1.2.1 alpha arrays › HTH › HTH › winged helix domain › HTH_1 0.82 57.0 5.01e-01 73.7% 50.6%
3387117 101.1.2.1 alpha arrays › HTH › HTH › winged helix domain › HTH_1 0.82 58.0 5.12e-01 73.7% 53.8%
3589664 101.1.2.1 alpha arrays › HTH › HTH › winged helix domain › HTH_1 0.82 60.0 5.18e-01 77.2% 70.6%
3225517 101.1.1.24 alpha arrays › HTH › HTH › Three-helical HTH › CENP-B_N 0.82 56.0 5.23e-01 75.4% 58.6%
359006 101.1.2.1 alpha arrays › HTH › HTH › winged helix domain › HTH_1 0.81 57.0 5.14e-01 73.7% 56.6%
3946548 101.1.2.1 alpha arrays › HTH › HTH › winged helix domain › HTH_1 0.80 58.0 4.96e-01 77.2% 64.4%
3942028 101.1.2.1 alpha arrays › HTH › HTH › winged helix domain › HTH_1 0.79 57.0 4.92e-01 77.2% 64.4%
5074939 101.1.4.0 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like 0.79 53.0 5.42e-01 70.2% 74.5%
4032183 101.1.2.1 alpha arrays › HTH › HTH › winged helix domain › HTH_1 0.79 57.0 5.11e-01 77.2% 72.5%
5041148 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.77 57.0 5.26e-01 77.2% 64.3%
5023662 101.1.2.1 alpha arrays › HTH › HTH › winged helix domain › HTH_1 0.77 53.0 4.77e-01 73.7% 53.8%
3767621 101.1.1.24 alpha arrays › HTH › HTH › Three-helical HTH › CENP-B_N 0.76 53.0 4.74e-01 73.7% 55.0%
5060354 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.75 52.0 4.99e-01 71.9% 63.1%
4002185 101.1.1.24 alpha arrays › HTH › HTH › Three-helical HTH › CENP-B_N 0.75 53.0 4.88e-01 75.4% 60.0%
4945903 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.74 54.0 5.53e-01 77.2% 87.3%
5055914 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.74 51.0 5.17e-01 71.9% 83.6%
4945888 5041.1.1.0 extended segments › F1F0 ATP synthase subunit C › F1F0 ATP synthase subunit C › F1F0 ATP synthase subunit C 0.74 62.0 5.54e-01 94.7% 66.3%
5042767 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.74 53.0 4.45e-01 77.2% 61.2%
5062184 101.1.2.141 alpha arrays › HTH › HTH › winged helix domain › HTH_24 0.73 51.0 5.04e-01 71.9% 68.3%
5068679 101.1.2.30 alpha arrays › HTH › HTH › winged helix domain › TrmB 0.73 50.0 5.16e-01 71.9% 74.5%
4945141 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.72 49.0 5.06e-01 71.9% 74.5%
3943559 101.1.2.1 alpha arrays › HTH › HTH › winged helix domain › HTH_1 0.72 58.0 5.01e-01 89.5% 93.3%
3282811 101.1.6.0 alpha arrays › HTH › HTH › TrpR 0.71 48.0 5.58e-01 70.2% 100.0%
4977346 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.70 51.0 5.44e-01 77.2% 94.0%
4971366 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.68 46.0 4.25e-01 71.9% 54.7%
4297810 101.1.2.1 alpha arrays › HTH › HTH › winged helix domain › HTH_1 0.67 58.0 5.01e-01 98.2% 94.4%
3754249 109.26.1.12 alpha superhelices › Repetitive alpha hairpins › Nuclear pore complex component Nup133/Nup170/Nup157 C-terminal domains › Nuclear pore complex component Nup133/Nup170/Nup157 C-terminal domains › TPR_Nup160_C, TPR_NUP160_120_M 0.66 51.0 3.39e-01 82.5% 43.1%
3279636 101.1.2.1 alpha arrays › HTH › HTH › winged helix domain › HTH_1 0.64 57.0 4.89e-01 100.0% 92.2%
5055912 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.63 52.0 4.84e-01 89.5% 75.7%
4665755 101.1.1.470 alpha arrays › HTH › HTH › Three-helical HTH › Phage_terminase 0.62 45.0 4.73e-01 77.2% 92.0%