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NC_015157.1__YP_004251061.1__ViPhICP1_gp120__00120
Bact-VirNC_015157.1__YP_004251061.1__ViPhICP1_gp120__00120
Identity
- Accession:
- NC_015157 ↗
- Kingdom:
- phage
Quality
78.8
mean pLDDT
Cluster
View cluster (2 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 28-120
Domain cluster:
rep: NC_025470.1__YP_009104113.1__S140_115__00112__D172-266
CATH (7)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3jv1A00 | 3.10.280.10 | Alpha Beta › Roll › Mitochondrial Matrix Protein; Chain A › Mitochondrial glycoprotein | 0.62 | 43.0 | 3.43e-01 | 100.0% | 36.8% |
| 1ulvA04 | 2.60.40.1190 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.59 | 53.0 | 3.83e-01 | 96.8% | 98.4% |
| 4mlgG00 | 2.115.10.20 | Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 | 0.53 | 42.0 | 2.96e-01 | 87.1% | 63.3% |
| 6ap4B02 | 3.10.150.10 | Alpha Beta › Roll › DNA Polymerase III; Chain A, domain 2 › DNA Polymerase III, subunit A, domain 2 | 0.52 | 41.0 | 3.60e-01 | 84.9% | 85.8% |
| 3qwmA00 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.51 | 38.0 | 3.42e-01 | 78.5% | 67.7% |
| 7uhyA01 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.50 | 40.0 | 2.81e-01 | 87.1% | 61.9% |
| 4nkbA01 | 3.30.1120.120 | Alpha Beta › 2-Layer Sandwich › Arylsulfatase, C-terminal domain › | 0.50 | 38.0 | 3.57e-01 | 80.6% | 75.4% |
ECOD (10)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1383 | 11.1.1.133 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Glucodextran_C | 0.60 | 51.0 | 3.77e-01 | 93.5% | 98.4% |
| 5015011 | 11.1.1.133 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Glucodextran_C | 0.58 | 50.0 | 3.66e-01 | 94.6% | 97.1% |
| 3865052 | 220.1.1.21 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › SPT16 | 0.55 | 41.0 | 3.59e-01 | 78.5% | 94.3% |
| 3969999 | 10.12.1.0 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix | 0.54 | 46.0 | 3.99e-01 | 94.6% | 88.3% |
| 3737177 | 241.1.1.0 ↗ | a+b two layers › Type III secretory system chaperone-like › Type III secretory system chaperone › Type III secretory system chaperone | 0.54 | 37.0 | 3.53e-01 | 71.0% | 63.6% |
| 5032655 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.53 | 45.0 | 3.48e-01 | 92.5% | 96.0% |
| 3921144 | 5.1.4.179 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Beta-prop_Vps41 | 0.52 | 43.0 | 2.93e-01 | 89.2% | 86.5% |
| 3174498 | 3257.1.1.1 ↗ | a+b complex topology › Phosphoinositide phosphatase SAC1 N-terminal domain › Phosphoinositide phosphatase SAC1 N-terminal domain › Phosphoinositide phosphatase SAC1 N-terminal domain › Syja_N | 0.52 | 43.0 | 3.34e-01 | 95.7% | 70.2% |
| 5003221 | 241.15.1.0 ↗ | a+b two layers › Type III secretory system chaperone-like › FP (Fbxo7/PI31) dimerization domain › FP (Fbxo7/PI31) dimerization domain | 0.51 | 35.0 | 3.32e-01 | 71.0% | 60.9% |
| 3348604 | 9.1.1.0 ↗ | beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins | 0.50 | 43.0 | 3.67e-01 | 96.8% | 96.2% |