NC_015208.1__YP_004286184.1__PsPphi15_gp06__00006

Bact-Vir

Identity

74.6 mean pLDDT

Heunggongvirae› Uroviricota› Caudoviricetes› Autographivirales› Autotranscriptaviridae› Troedvirus› Pseudomonas_phage_phi15

TaxID: 988656

Singleton — not in a non-trivial cluster

Download PDB Download Scores JSON

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 18-73

PDB

Domain cluster: representative

CATH (4)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
4xt1A00	1.20.1070.10	Mainly Alpha › Up-down Bundle › Rhopdopsin 7-helix transmembrane proteins › Rhodopsin 7-helix transmembrane proteins	0.72	49.0	3.13e-01	73.2%	94.8%
2itaA01	1.20.5.920	Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › rhodobacter sphaeroides pufx membrane protein	0.60	44.0	4.42e-01	83.9%	100.0%
2lp7A00	1.10.287.210	Mainly Alpha › Orthogonal Bundle › Helix Hairpins ›	0.56	47.0	4.68e-01	100.0%	94.9%
1kkmB00	3.40.50.300	Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases	0.52	43.0	3.10e-01	96.4%	65.0%

ECOD (5)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
None	—		0.71	54.0	2.92e-01	80.4%	4.8%
3463832	386.1.1.334 ↗	few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › Utp11	0.64	57.0	4.30e-01	98.2%	42.3%
3985609	304.55.1.8 ↗	a+b two layers › Alpha-beta plaits › Origin of replication-binding domains › Origin of replication-binding domains › TrwC	0.62	44.0	3.19e-01	73.2%	77.5%
3964295	230.4.1.1 ↗	a+b two layers › T-fold › ApbE-like › ApbE-like › ApbE	0.59	42.0	3.62e-01	76.8%	56.7%
3386828	2488.1.1.3 ↗	a/b three-layered sandwiches › alpha/beta knot › alpha/beta knot › alpha/beta knot › tRNA_m1G_MT	0.54	37.0	2.54e-01	75.0%	51.7%