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NC_015251.1__YP_004301031.1__ST65p194__00193
Bact-VirNC_015251.1__YP_004301031.1__ST65p194__00193
Identity
- Accession:
- NC_015251 ↗
- Kingdom:
- phage
Quality
74.1
mean pLDDT
Taxonomy
Heunggongvirae›
Uroviricota›
Caudoviricetes›
Pantevenvirales›
Straboviridae›
Ishigurovirus›
Aeromonas_phage_65
TaxID: 2919549
Cluster
View cluster (3 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 3-74
Domain cluster:
representative
CATH (31)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 6t5kC00 | 3.60.15.10 | Alpha Beta › 4-Layer Sandwich › Metallo-beta-lactamase; Chain A › Ribonuclease Z/Hydroxyacylglutathione hydrolase-like | 0.70 | 55.0 | 3.83e-01 | 84.7% | 94.6% |
| 2lpuA00 | 3.30.1460.50 | Alpha Beta › 2-Layer Sandwich › Yope Regulator; Chain: A, › | 0.69 | 61.0 | 4.85e-01 | 100.0% | 90.5% |
| 4pdyA01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.66 | 48.0 | 4.37e-01 | 77.8% | 89.9% |
| 4kcaA03 | 2.40.128.10 | Mainly Beta › Beta Barrel › Lipocalin › | 0.66 | 52.0 | 4.74e-01 | 87.5% | 100.0% |
| 1ygyB03 | 3.30.1330.90 | Alpha Beta › 2-Layer Sandwich › 60s Ribosomal Protein L30; Chain: A; › D-3-phosphoglycerate dehydrogenase; domain 3 | 0.64 | 51.0 | 4.23e-01 | 90.3% | 92.1% |
| 3qf7A01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.63 | 47.0 | 3.13e-01 | 79.2% | 43.5% |
| 2v4jB01 | 3.30.70.3340 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.63 | 44.0 | 3.63e-01 | 72.2% | 59.1% |
| 1bp1A01 | 3.15.10.10 | Alpha Beta › Super Roll › Bactericidal permeability-increasing protein; domain 1 › Bactericidal permeability-increasing protein; domain 1 | 0.62 | 50.0 | 3.80e-01 | 90.3% | 97.2% |
| 3ijtB00 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.62 | 54.0 | 4.39e-01 | 100.0% | 75.5% |
| 4hbrA00 | 3.10.450.360 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.60 | 48.0 | 3.93e-01 | 90.3% | 71.4% |
| 3d9rB00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.59 | 43.0 | 3.55e-01 | 77.8% | 91.0% |
| 2fe7B00 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.59 | 44.0 | 3.40e-01 | 80.6% | 78.9% |
| 6u5vB07 | 3.30.1120.100 | Alpha Beta › 2-Layer Sandwich › Arylsulfatase, C-terminal domain › | 0.59 | 48.0 | 3.98e-01 | 90.3% | 78.3% |
| 1khiA01 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.58 | 48.0 | 4.77e-01 | 91.7% | 88.0% |
| 1e5pA00 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.57 | 48.0 | 3.91e-01 | 98.6% | 98.7% |
| 2el8A01 | 3.30.505.10 | Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › SH2 domain | 0.57 | 44.0 | 4.12e-01 | 86.1% | 76.9% |
| 2euiA01 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.56 | 40.0 | 3.33e-01 | 77.8% | 94.3% |
| 4lgvD02 | 3.30.360.10 | Alpha Beta › 2-Layer Sandwich › Dihydrodipicolinate Reductase; domain 2 › Dihydrodipicolinate Reductase; domain 2 | 0.56 | 44.0 | 2.98e-01 | 84.7% | 42.6% |
| 2crfA01 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.55 | 42.0 | 3.64e-01 | 87.5% | 72.0% |
| 6n90A00 | 3.30.2310.20 | Alpha Beta › 2-Layer Sandwich › YaeB-like fold › RelE-like | 0.54 | 38.0 | 3.59e-01 | 79.2% | 60.2% |
| 1avwB00 | 2.80.10.50 | Mainly Beta › Trefoil › Trefoil (Acidic Fibroblast Growth Factor, subunit A) › | 0.54 | 44.0 | 3.50e-01 | 97.2% | 83.0% |
| 3h6qA00 | 2.80.10.50 | Mainly Beta › Trefoil › Trefoil (Acidic Fibroblast Growth Factor, subunit A) › | 0.54 | 44.0 | 3.52e-01 | 97.2% | 84.5% |
| 4g7nA01 | 3.30.1120.120 | Alpha Beta › 2-Layer Sandwich › Arylsulfatase, C-terminal domain › | 0.54 | 39.0 | 3.40e-01 | 79.2% | 57.0% |
| 4ml0B00 | 3.30.2310.20 | Alpha Beta › 2-Layer Sandwich › YaeB-like fold › RelE-like | 0.53 | 36.0 | 3.38e-01 | 73.6% | 55.6% |
| 4q8gA00 | 3.90.70.10 | Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases | 0.53 | 40.0 | 2.69e-01 | 84.7% | 91.0% |
| 5fgoA00 | 3.10.450.700 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.53 | 37.0 | 3.95e-01 | 93.1% | 85.5% |
| 2v8qB00 | 6.20.250.60 | Special › Other non-globular › Double Stranded RNA Binding Domain › | 0.53 | 35.0 | 3.53e-01 | 77.8% | 67.1% |
| 1pguA02 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.53 | 43.0 | 2.97e-01 | 100.0% | 63.6% |
| 1h6lA00 | 2.120.10.30 | Mainly Beta › 6 Propeller › Neuraminidase › TolB, C-terminal domain | 0.52 | 45.0 | 2.89e-01 | 97.2% | 92.6% |
| 1kfiA04 | 3.30.310.50 | Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › Alpha-D-phosphohexomutase, C-terminal domain | 0.51 | 41.0 | 3.56e-01 | 94.4% | 76.8% |
| 1f20A02 | 1.20.990.10 | Mainly Alpha › Up-down Bundle › NADPH-cytochrome p450 Reductase; Chain A, domain 3 › NADPH-cytochrome p450 Reductase; Chain A, domain 3 | 0.50 | 34.0 | 2.72e-01 | 100.0% | 32.1% |
ECOD (41)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3174465 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.71 | 52.0 | 4.52e-01 | 77.8% | 53.6% |
| 3944588 | 241.1.1.9 ↗ | a+b two layers › Type III secretory system chaperone-like › Type III secretory system chaperone › Type III secretory system chaperone › DUF3156 | 0.70 | 62.0 | 4.73e-01 | 100.0% | 92.9% |
| 3832160 | 243.3.1.1 ↗ | a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin › Cystatin | 0.69 | 51.0 | 4.24e-01 | 79.2% | 91.5% |
| 4992408 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.69 | 37.0 | 4.58e-01 | 79.2% | 84.4% |
| 3813591 | 243.3.1.0 ↗ | a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin | 0.69 | 51.0 | 4.12e-01 | 79.2% | 85.7% |
| 3177659 | 5.1.4.307 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › PF29630 | 0.68 | 54.0 | 3.34e-01 | 87.5% | 33.6% |
| 4357447 | 5.1.4.158 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Beta-prop_HPS5 | 0.68 | 50.0 | 3.09e-01 | 77.8% | 23.8% |
| 3316780 | 252.1.1.1 ↗ | a+b two layers › DNA-binding domain › Methyl-CpG-binding domain, MBD › Methyl-CpG-binding domain, MBD › MBD | 0.67 | 52.0 | 5.56e-01 | 100.0% | 100.0% |
| 3967996 | 223.1.1.76 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_7 | 0.66 | 48.0 | 4.14e-01 | 77.8% | 48.7% |
| 3383781 | 252.1.1.0 ↗ | a+b two layers › DNA-binding domain › Methyl-CpG-binding domain, MBD › Methyl-CpG-binding domain, MBD | 0.65 | 40.0 | 4.57e-01 | 81.9% | 88.0% |
| 3176295 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.65 | 48.0 | 3.08e-01 | 79.2% | 25.8% |
| 3476215 | 5.1.4.224 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40_RFWD3 | 0.64 | 47.0 | 3.00e-01 | 79.2% | 27.8% |
| 3785991 | 241.15.1.3 ↗ | a+b two layers › Type III secretory system chaperone-like › FP (Fbxo7/PI31) dimerization domain › FP (Fbxo7/PI31) dimerization domain › SPC25 | 0.63 | 56.0 | 4.96e-01 | 100.0% | 83.7% |
| 4991452 | 304.37.1.1 ↗ | a+b two layers › Alpha-beta plaits › Sulfite reductase, domains 1 and 3 › Sulfite reductase, domains 1 and 3 › NIR_SIR_ferr | 0.63 | 45.0 | 3.92e-01 | 73.6% | 79.0% |
| 3902438 | 386.1.1.0 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers | 0.63 | 47.0 | 4.23e-01 | 100.0% | 57.3% |
| 5072279 | 2004.1.1.198 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_23 | 0.63 | 47.0 | 2.95e-01 | 80.6% | 82.1% |
| 3487292 | 5.1.4.34 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Nup88 | 0.62 | 46.0 | 2.78e-01 | 80.6% | 30.1% |
| 3243790 | 239.3.1.0 ↗ | beta barrels › Ribosomal protein L25-like › FAS1 domain › FAS1 domain | 0.62 | 48.0 | 3.70e-01 | 87.5% | 68.9% |
| 5024450 | 331.3.1.0 ↗ | a+b two layers › TBP-like › Bet v1-like › Bet v1-like | 0.61 | 52.0 | 4.37e-01 | 100.0% | 76.3% |
| 3518229 | 239.3.1.1 ↗ | beta barrels › Ribosomal protein L25-like › FAS1 domain › FAS1 domain › Fasciclin | 0.61 | 48.0 | 3.71e-01 | 90.3% | 69.4% |
| 3228051 | 295.1.1.3 ↗ | a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain › PurA | 0.61 | 42.0 | 4.38e-01 | 72.2% | 90.8% |
| 3257727 | 216.1.1.0 ↗ | a+b two layers › UBC-like › UBC-like › UBC-like | 0.60 | 52.0 | 4.37e-01 | 100.0% | 65.4% |
| 3177333 | 59.1.2.0 ↗ | beta complex topology › triple barrel › triple barrel › RNase H2 subunits B and C | 0.59 | 43.0 | 4.44e-01 | 77.8% | 100.0% |
| 3929507 | 243.3.1.0 ↗ | a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin | 0.58 | 43.0 | 3.94e-01 | 79.2% | 97.9% |
| 3273263 | 5.1.4.169 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Beta-prop_RSE1_2nd | 0.58 | 43.0 | 2.70e-01 | 80.6% | 15.7% |
| 4987228 | 331.3.1.0 ↗ | a+b two layers › TBP-like › Bet v1-like › Bet v1-like | 0.58 | 50.0 | 3.87e-01 | 100.0% | 60.4% |
| 3700010 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.57 | 47.0 | 3.10e-01 | 87.5% | 39.6% |
| 3742766 | 5.1.4.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 | 0.57 | 41.0 | 2.75e-01 | 79.2% | 24.8% |
| 5071179 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.57 | 34.0 | 3.70e-01 | 75.0% | 71.7% |
| 3496419 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.56 | 47.0 | 2.72e-01 | 98.6% | 33.7% |
| 3488471 | 5.1.2.41 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 5-bladed › WD40_RFWD3 | 0.56 | 40.0 | 3.49e-01 | 77.8% | 48.7% |
| 3404671 | 6.1.1.1 ↗ | beta duplicates or obligate multimers › beta-Trefoil › beta-Trefoil › beta-Trefoil › FGF | 0.56 | 48.0 | 3.96e-01 | 100.0% | 81.3% |
| 3924385 | 1.1.15.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › PK beta-barrel domain-like | 0.55 | 49.0 | 3.23e-01 | 100.0% | 31.8% |
| 3960676 | 298.1.1.0 ↗ | a+b two layers › FwdE/GAPDH domain-like › Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain › Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain | 0.54 | 42.0 | 2.77e-01 | 87.5% | 60.9% |
| 2491145 | 219.1.1.50 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › UCH_1 | 0.53 | 40.0 | 2.47e-01 | 83.3% | 71.1% |
| 3510918 | 9.1.1.0 ↗ | beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins | 0.53 | 41.0 | 3.51e-01 | 90.3% | 91.9% |
| 3600338 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.53 | 39.0 | 3.80e-01 | 91.7% | 72.5% |
| 5034142 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.52 | 42.0 | 2.70e-01 | 94.4% | 43.6% |
| 3760107 | 10.1.1.3 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Calreticulin | 0.51 | 39.0 | 2.65e-01 | 84.7% | 62.8% |
| 2411452 | 101.1.9.0 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain | 0.51 | 39.0 | 3.29e-01 | 87.5% | 77.8% |
| 5004087 | 243.3.1.0 ↗ | a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin | 0.50 | 40.0 | 3.95e-01 | 90.3% | 92.5% |