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NC_015251.1__YP_004301048.1__ST65p211__00210

Bact-Vir

NC_015251.1__YP_004301048.1__ST65p211__00210

Identity

Accession:
NC_015251 ↗
Kingdom:
phage

Quality

83.2 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Pantevenvirales› Straboviridae› Ishigurovirus› Aeromonas_phage_65

TaxID: 2919549

Cluster

Singleton — not in a non-trivial cluster

3D Structure

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Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 30-127
PDB
Domain cluster: representative
CATH (16)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3bxoA02 2.20.130.10 Mainly Beta › Single Sheet › S-adenosyl-L-methionine-dependent methyltransferases › CAC2371-like domains 0.64 36.0 4.50e-01 94.9% 91.5%
3ci0I00 3.30.1300.30 Alpha Beta › 2-Layer Sandwich › Pantoate--beta-alanine Ligase; Chain: A,domain 2 › GSPII I/J protein-like 0.64 35.0 3.84e-01 94.9% 65.1%
2retA00 3.30.1300.30 Alpha Beta › 2-Layer Sandwich › Pantoate--beta-alanine Ligase; Chain: A,domain 2 › GSPII I/J protein-like 0.63 35.0 3.79e-01 94.9% 64.3%
3ke6B01 3.60.40.10 Alpha Beta › 4-Layer Sandwich › Phosphatase 2c; domain 1 › PPM-type phosphatase domain 0.62 55.0 4.23e-01 98.0% 91.0%
3bxpB00 3.40.50.1820 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain 0.62 41.0 3.04e-01 94.9% 25.2%
5bw0F00 3.30.1300.30 Alpha Beta › 2-Layer Sandwich › Pantoate--beta-alanine Ligase; Chain: A,domain 2 › GSPII I/J protein-like 0.61 37.0 3.85e-01 95.9% 64.8%
1pcfA00 2.30.31.10 Mainly Beta › Roll › Transcriptional Co-activator pc4; Chain A › Transcriptional Coactivator Pc4; Chain A 0.60 36.0 4.32e-01 83.7% 89.4%
7a0hA02 3.90.1150.210 Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › F-actin capping protein, beta subunit 0.57 48.0 4.04e-01 94.9% 79.9%
3e8tA00 3.15.10.30 Alpha Beta › Super Roll › Bactericidal permeability-increasing protein; domain 1 › TULIP domain 0.56 39.0 3.07e-01 70.4% 64.8%
3soyA00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.55 35.0 3.08e-01 73.5% 45.1%
3gkeA02 3.90.380.10 Alpha Beta › Alpha-Beta Complex › Naphthalene 1,2-dioxygenase Alpha Subunit; Chain A, domain 1 › Naphthalene 1,2-dioxygenase Alpha Subunit; Chain A, domain 1 0.54 40.0 3.17e-01 79.6% 66.7%
4pswA02 3.40.630.30 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) 0.53 39.0 3.59e-01 78.6% 84.2%
4jglA00 2.40.128.530 Mainly Beta › Beta Barrel › Lipocalin › 0.52 44.0 3.84e-01 92.9% 79.6%
1tkjA00 3.40.630.10 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Zn peptidases 0.52 45.0 3.32e-01 99.0% 98.9%
2jkbA02 2.120.10.10 Mainly Beta › 6 Propeller › Neuraminidase › 0.51 43.0 2.96e-01 94.9% 85.4%
1orvA02 3.40.50.1820 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain 0.50 43.0 3.27e-01 99.0% 79.1%
ECOD (17)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3534691 4051.1.1.2 ↗ a+b two layers › a+b domain in Capz › a+b domain in Capz › a+b domain in Capz › F-actin_cap_A 0.63 53.0 4.45e-01 91.8% 67.3%
3056279 4051.1.1.2 ↗ a+b two layers › a+b domain in Capz › a+b domain in Capz › a+b domain in Capz › F-actin_cap_A 0.63 52.0 4.44e-01 91.8% 68.1%
3724000 4099.1.1.0 ↗ a+b two layers › Kinetochore globular domain-like › Kinetochore globular domain-like › Kinetochore globular domain-like 0.61 51.0 4.79e-01 91.8% 88.3%
3990957 216.1.1.4 ↗ a+b two layers › UBC-like › UBC-like › UBC-like › RWD 0.59 52.0 4.65e-01 95.9% 81.5%
3993690 216.1.1.35 ↗ a+b two layers › UBC-like › UBC-like › UBC-like › Rgr-1_C 0.59 50.0 3.73e-01 95.9% 47.7%
3592053 71.1.1.0 ↗ beta meanders › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB 0.56 43.0 3.40e-01 82.7% 97.1%
3430977 213.1.1.0 ↗ a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) 0.55 44.0 3.72e-01 87.8% 96.0%
3619456 216.1.1.24 ↗ a+b two layers › UBC-like › UBC-like › UBC-like › Med14_C 0.55 46.0 3.48e-01 95.9% 46.0%
3690327 4099.1.1.2 ↗ a+b two layers › Kinetochore globular domain-like › Kinetochore globular domain-like › Kinetochore globular domain-like › Spindle_Spc25 0.54 45.0 4.39e-01 94.9% 85.5%
5075730 3435.1.1.0 ↗ a+b two layers › Recombination-associated protein rdgC › Recombination-associated protein rdgC › Recombination-associated protein rdgC 0.53 42.0 3.99e-01 83.7% 71.3%
3784839 319.1.1.0 ↗ beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones 0.52 30.0 3.05e-01 90.8% 52.0%
5055689 243.3.1.0 ↗ a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin 0.51 38.0 4.20e-01 100.0% 100.0%
3650579 3459.1.1.3 ↗ beta sandwiches › Fas apoptotic inhibitory molecule › Fas apoptotic inhibitory molecule › Fas apoptotic inhibitory molecule › DUF868 0.51 41.0 3.78e-01 91.8% 87.9%
3299711 3459.1.1.3 ↗ beta sandwiches › Fas apoptotic inhibitory molecule › Fas apoptotic inhibitory molecule › Fas apoptotic inhibitory molecule › DUF868 0.51 41.0 3.81e-01 91.8% 91.9%
3786448 5.1.4.242 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › PEP5_VPS11_N 0.50 39.0 2.76e-01 87.8% 59.2%
3373176 3459.1.1.3 ↗ beta sandwiches › Fas apoptotic inhibitory molecule › Fas apoptotic inhibitory molecule › Fas apoptotic inhibitory molecule › DUF868 0.50 41.0 3.70e-01 90.8% 90.6%
3465939 5.1.3.68 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › DUF1618 0.50 43.0 2.92e-01 93.9% 83.6%