←Back to structures
NC_015251.1__YP_004301194.1__ST65p357__00356
Bact-VirNC_015251.1__YP_004301194.1__ST65p357__00356
Identity
- Accession:
- NC_015251 ↗
- Kingdom:
- phage
Quality
80.2
mean pLDDT
Taxonomy
Heunggongvirae›
Uroviricota›
Caudoviricetes›
Pantevenvirales›
Straboviridae›
Ishigurovirus›
Aeromonas_phage_65
TaxID: 2919549
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 2-47
Domain cluster:
representative
CATH (36)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1b69A00 | 3.30.160.60 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Classic Zinc Finger | 0.70 | 57.0 | 5.12e-01 | 97.8% | 88.4% |
| 3kifD00 | 2.20.25.650 | Mainly Beta › Single Sheet › N-terminal domain of TfIIb › Tachylectin-2-like | 0.69 | 52.0 | 4.29e-01 | 87.0% | 80.2% |
| 4u3qB00 | 2.40.128.640 | Mainly Beta › Beta Barrel › Lipocalin › | 0.63 | 47.0 | 3.72e-01 | 82.6% | 97.0% |
| 4a2lB01 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.62 | 48.0 | 3.00e-01 | 91.3% | 32.0% |
| 2jrbA00 | 3.30.250.20 | Alpha Beta › 2-Layer Sandwich › Rec A Protein; domain 2 › L1 transposable element, C-terminal domain | 0.62 | 47.0 | 4.25e-01 | 84.8% | 86.2% |
| 6uzjA00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.62 | 43.0 | 3.92e-01 | 73.9% | 96.8% |
| 1z1bA01 | 3.30.160.60 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Classic Zinc Finger | 0.62 | 49.0 | 4.64e-01 | 91.3% | 77.2% |
| 1wmvA01 | 2.20.70.10 | Mainly Beta › Single Sheet › Ubiquitin Ligase Nedd4; Chain: W; › | 0.61 | 31.0 | 3.79e-01 | 93.5% | 83.3% |
| 1vq8Q00 | 2.30.30.70 | Mainly Beta › Roll › SH3 type barrels. › Ribosomal protein L21 | 0.61 | 42.0 | 3.45e-01 | 76.1% | 66.3% |
| 1y2mD01 | 1.10.275.10 | Mainly Alpha › Orthogonal Bundle › Fumarase C; Chain B, domain 1 › Fumarase/aspartase (N-terminal domain) | 0.60 | 49.0 | 3.24e-01 | 100.0% | 69.1% |
| 3f0zA01 | 3.30.310.260 | Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › | 0.59 | 43.0 | 3.30e-01 | 76.1% | 78.6% |
| 3kz5E00 | 6.10.140.1550 | Special › Helix non-globular › Helix Hairpins › | 0.58 | 37.0 | 3.65e-01 | 82.6% | 56.2% |
| 2eayB02 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.58 | 39.0 | 3.93e-01 | 73.9% | 100.0% |
| 1ncsA00 | 3.30.160.60 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Classic Zinc Finger | 0.57 | 41.0 | 4.16e-01 | 100.0% | 78.7% |
| 4dguA02 | 2.60.40.2670 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.57 | 41.0 | 3.30e-01 | 78.3% | 100.0% |
| 1alyA00 | 2.60.120.40 | Mainly Beta › Sandwich › Jelly Rolls › | 0.57 | 48.0 | 3.43e-01 | 100.0% | 97.9% |
| 4x9cD00 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.57 | 39.0 | 3.65e-01 | 73.9% | 88.3% |
| 3dsoA00 | 2.40.10.300 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Copper resistance protein K | 0.56 | 41.0 | 3.64e-01 | 78.3% | 81.8% |
| 4nkbB02 | 3.30.1120.130 | Alpha Beta › 2-Layer Sandwich › Arylsulfatase, C-terminal domain › | 0.55 | 41.0 | 3.38e-01 | 84.8% | 68.9% |
| 4h0oA01 | 3.30.420.40 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain | 0.53 | 43.0 | 3.04e-01 | 100.0% | 36.0% |
| 2x4jA01 | 2.30.30.600 | Mainly Beta › Roll › SH3 type barrels. › | 0.53 | 42.0 | 3.39e-01 | 93.5% | 65.7% |
| 6gfaA02 | 3.30.30.30 | Alpha Beta › 2-Layer Sandwich › Defensin A-like › | 0.53 | 42.0 | 4.06e-01 | 95.7% | 100.0% |
| 7ffnN01 | 2.60.40.3200 | Mainly Beta › Sandwich › Immunoglobulin-like › Alphavirus E2 glycoprotein, A domain | 0.53 | 44.0 | 3.04e-01 | 100.0% | 49.2% |
| 3bfmA02 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.53 | 40.0 | 4.13e-01 | 89.1% | 90.7% |
| 1m3qA01 | 3.30.310.40 | Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › | 0.53 | 39.0 | 3.28e-01 | 76.1% | 67.4% |
| 2d5wA03 | 3.10.105.10 | Alpha Beta › Roll › Dipeptide-binding Protein; domain 3 › Dipeptide-binding Protein; Domain 3 | 0.52 | 44.0 | 2.78e-01 | 95.7% | 55.2% |
| 4tvcA01 | 2.10.270.10 | Mainly Beta › Ribbon › left handed beta-beta-3-solenoid › Cholin Binding | 0.52 | 40.0 | 2.82e-01 | 95.7% | 78.7% |
| 2dy1A01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.52 | 39.0 | 2.51e-01 | 87.0% | 20.4% |
| 5kmpB00 | 3.50.50.100 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › | 0.52 | 43.0 | 2.57e-01 | 100.0% | 83.5% |
| 3hrsA02 | 2.30.30.90 | Mainly Beta › Roll › SH3 type barrels. › Ferrous iron transport protein A (FeoA) | 0.52 | 43.0 | 3.69e-01 | 95.7% | 92.1% |
| 4chjA00 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.51 | 42.0 | 3.20e-01 | 97.8% | 65.3% |
| 2hzmA02 | 2.20.140.20 | Mainly Beta › Single Sheet › q64v53_bacfr protein fold › | 0.51 | 39.0 | 3.35e-01 | 91.3% | 90.6% |
| 3f7sA00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.51 | 36.0 | 2.75e-01 | 84.8% | 87.3% |
| 2wvxA01 | 2.70.98.10 | Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › | 0.51 | 44.0 | 2.72e-01 | 100.0% | 89.3% |
| 2fjrA02 | 2.10.109.10 | Mainly Beta › Ribbon › Umud Fragment, subunit A › Umud Fragment, subunit A | 0.50 | 40.0 | 3.13e-01 | 95.7% | 41.6% |
| 6i7eA01 | 1.20.58.530 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.50 | 42.0 | 2.86e-01 | 95.7% | 61.1% |
ECOD (29)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4056113 | 1.1.7.80 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › RND-MFP_C | 0.69 | 47.0 | 3.69e-01 | 71.7% | 49.0% |
| 389722 | 5.1.2.12 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 5-bladed › Tachylectin | 0.69 | 52.0 | 4.25e-01 | 87.0% | 77.7% |
| 3586825 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.67 | 51.0 | 3.06e-01 | 87.0% | 24.6% |
| 3691998 | 386.1.1.18 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › zf-C2H2_jaz | 0.64 | 50.0 | 4.53e-01 | 84.8% | 63.1% |
| 4240808 | 325.1.7.4 ↗ | a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Single hybrid motif › GCV_H | 0.64 | 44.0 | 3.27e-01 | 73.9% | 76.2% |
| 3997581 | 5.1.3.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed | 0.63 | 50.0 | 3.06e-01 | 95.7% | 27.2% |
| 3788416 | 5.1.4.155 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › MIOS_WD40 | 0.63 | 49.0 | 2.90e-01 | 91.3% | 29.6% |
| 3748837 | 330.9.1.1 ↗ | a+b two layers › dsRBD-like › C-terminal domain in LINE-1 ORF1p › C-terminal domain in LINE-1 ORF1p › Tnp_22_dsRBD | 0.63 | 50.0 | 4.26e-01 | 91.3% | 80.0% |
| 3941391 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.62 | 44.0 | 4.14e-01 | 78.3% | 96.7% |
| 185542 | 304.35.1.1 ↗ | a+b two layers › Alpha-beta plaits › Methyl-coenzyme M reductase subunits › Methyl-coenzyme M reductase subunits › MCR_gamma | 0.61 | 46.0 | 2.91e-01 | 87.0% | 16.9% |
| 3221711 | 221.1.1.112 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › ULD_3 | 0.60 | 47.0 | 3.57e-01 | 89.1% | 93.9% |
| 4937731 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.60 | 45.0 | 4.14e-01 | 82.6% | 95.0% |
| 3270724 | 206.1.3.4 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › ATP-grasp › mRNA_cap_enzyme | 0.59 | 38.0 | 2.49e-01 | 95.7% | 12.8% |
| 4629529 | 2002.1.1.420 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › HpcH_HpaI, PF25918 | 0.59 | 44.0 | 2.58e-01 | 100.0% | 9.3% |
| 3756676 | 4.1.1.118 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_15 | 0.59 | 42.0 | 3.37e-01 | 76.1% | 69.0% |
| 134297 | 331.1.1.5 ↗ | a+b two layers › TBP-like › TATA-box binding protein-like › TATA-box binding protein-like › OGG_N | 0.59 | 41.0 | 3.21e-01 | 76.1% | 48.7% |
| 1141926 | 3433.1.1.0 ↗ | a+b duplicates or obligate multimers › ParB dimerization domain › ParB dimerization domain › Plasmid-encoded ParB dimerization domain | 0.58 | 37.0 | 3.65e-01 | 82.6% | 56.2% |
| 3563240 | 387.1.1.55 ↗ | few secondary structure elements › omega toxin-like › omega toxin-related › omega toxin-related › TAFA | 0.58 | 39.0 | 3.27e-01 | 71.7% | 45.5% |
| 3476478 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.58 | 40.0 | 3.28e-01 | 73.9% | 53.7% |
| 5033892 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.57 | 41.0 | 3.77e-01 | 80.4% | 98.5% |
| 4026056 | 221.1.1.7 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › UBX | 0.56 | 46.0 | 3.50e-01 | 100.0% | 68.0% |
| 5035483 | 3755.3.1.0 ↗ | alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin | 0.55 | 39.0 | 2.71e-01 | 76.1% | 24.7% |
| 5066058 | 7571.1.1.1 ↗ | a/b three-layered sandwiches › Formyltransferase › Formyltransferase › Formyltransferase › Formyl_trans_N | 0.55 | 41.0 | 2.72e-01 | 89.1% | 94.0% |
| 4525683 | 4.11.1.3 ↗ | beta barrels › SH3 › LexA/Signal peptidase › LexA/Signal peptidase › Phage_CI_C | 0.54 | 43.0 | 3.29e-01 | 93.5% | 43.2% |
| 5048065 | 295.1.1.0 ↗ | a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain | 0.54 | 45.0 | 3.60e-01 | 100.0% | 61.0% |
| 3976863 | 4.11.1.3 ↗ | beta barrels › SH3 › LexA/Signal peptidase › LexA/Signal peptidase › Phage_CI_C | 0.54 | 43.0 | 3.37e-01 | 93.5% | 47.6% |
| 5041793 | 2003.1.10.0 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › PreATP-grasp domain | 0.53 | 43.0 | 3.46e-01 | 89.1% | 63.3% |
| 3799652 | 4184.1.1.2 ↗ | beta barrels › MFPT repeat › MFPT repeat › MFPT repeat › MFP2b | 0.53 | 42.0 | 3.45e-01 | 93.5% | 67.4% |
| 3895018 | 4.1.1.118 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_15 | 0.50 | 39.0 | 3.61e-01 | 91.3% | 95.4% |
D2
high
residues 62-123
Domain cluster:
representative
CATH (33)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2jxtA01 | 3.10.20.10 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › | 0.73 | 57.0 | 5.37e-01 | 100.0% | 69.7% |
| 4tqrA01 | 3.30.70.270 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Reverse transcriptase/Diguanylate cyclase domain | 0.70 | 61.0 | 5.31e-01 | 100.0% | 79.6% |
| 4a18X01 | 3.10.20.10 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › | 0.68 | 57.0 | 5.24e-01 | 100.0% | 72.2% |
| 1y7xA02 | 2.30.30.550 | Mainly Beta › Roll › SH3 type barrels. › Major Vault Protein repeat | 0.68 | 47.0 | 4.93e-01 | 100.0% | 82.1% |
| 1gtdA00 | 3.30.1280.10 | Alpha Beta › 2-Layer Sandwich › Mth169; Chain: A , › Phosphoribosylformylglycinamidine synthase subunit PurS | 0.68 | 60.0 | 5.50e-01 | 100.0% | 97.5% |
| 2zw2A00 | 3.30.1280.10 | Alpha Beta › 2-Layer Sandwich › Mth169; Chain: A , › Phosphoribosylformylglycinamidine synthase subunit PurS | 0.67 | 60.0 | 5.39e-01 | 100.0% | 95.3% |
| 2cuwA00 | 3.30.1280.10 | Alpha Beta › 2-Layer Sandwich › Mth169; Chain: A , › Phosphoribosylformylglycinamidine synthase subunit PurS | 0.67 | 60.0 | 5.43e-01 | 100.0% | 95.2% |
| 1vq3B00 | 3.30.1280.10 | Alpha Beta › 2-Layer Sandwich › Mth169; Chain: A , › Phosphoribosylformylglycinamidine synthase subunit PurS | 0.66 | 59.0 | 5.29e-01 | 98.4% | 94.0% |
| 4njcA00 | 3.10.20.730 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › RNAP, epsilon subunit-like | 0.66 | 50.0 | 5.09e-01 | 100.0% | 85.0% |
| 2b7nA01 | 3.90.1170.20 | Alpha Beta › Alpha-Beta Complex › Aldehyde Oxidoreductase; domain 3 › Quinolinate phosphoribosyl transferase, N-terminal domain | 0.66 | 55.0 | 4.50e-01 | 98.4% | 76.4% |
| 3h8uA00 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.64 | 38.0 | 3.11e-01 | 100.0% | 29.5% |
| 2qsdA01 | 3.10.20.10 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › | 0.64 | 48.0 | 4.72e-01 | 100.0% | 77.6% |
| 1t4aA00 | 3.30.1280.10 | Alpha Beta › 2-Layer Sandwich › Mth169; Chain: A , › Phosphoribosylformylglycinamidine synthase subunit PurS | 0.63 | 55.0 | 5.13e-01 | 100.0% | 100.0% |
| 2q1zB02 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.59 | 44.0 | 3.89e-01 | 98.4% | 53.8% |
| 3eo6A00 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.59 | 46.0 | 3.88e-01 | 96.8% | 50.0% |
| 3pe0A03 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.58 | 46.0 | 4.60e-01 | 98.4% | 84.4% |
| 1zpvA00 | 3.30.70.260 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain | 0.58 | 48.0 | 4.45e-01 | 100.0% | 94.1% |
| 4emeC02 | 2.30.250.10 | Mainly Beta › Roll › Aminopeptidase i, Domain 2 › Aminopeptidase i, Domain 2 | 0.57 | 48.0 | 3.86e-01 | 100.0% | 71.9% |
| 2nytD00 | 3.40.140.10 | Alpha Beta › 3-Layer(aba) Sandwich › Cytidine Deaminase; domain 2 › Cytidine Deaminase, domain 2 | 0.57 | 44.0 | 3.25e-01 | 100.0% | 30.2% |
| 1o6uA02 | 2.60.120.680 | Mainly Beta › Sandwich › Jelly Rolls › GOLD domain | 0.57 | 49.0 | 4.18e-01 | 100.0% | 76.4% |
| 3w9iA06 | 3.30.70.1430 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Multidrug efflux transporter AcrB pore domain | 0.56 | 46.0 | 4.05e-01 | 98.4% | 98.0% |
| 6d92A01 | 3.30.420.10 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H | 0.56 | 48.0 | 3.30e-01 | 100.0% | 84.0% |
| 5bpxA00 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.55 | 43.0 | 3.24e-01 | 98.4% | 34.6% |
| 4ojdH03 | 2.60.40.3980 | Mainly Beta › Sandwich › Immunoglobulin-like › Cell-cell fusogen EFF/AFF, domain 3 | 0.55 | 47.0 | 4.05e-01 | 100.0% | 78.8% |
| 5k9fA00 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.55 | 47.0 | 4.04e-01 | 100.0% | 92.2% |
| 1yq2A04 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.53 | 45.0 | 3.72e-01 | 96.8% | 79.1% |
| 4owpB00 | 3.40.140.10 | Alpha Beta › 3-Layer(aba) Sandwich › Cytidine Deaminase; domain 2 › Cytidine Deaminase, domain 2 | 0.53 | 45.0 | 3.38e-01 | 100.0% | 37.3% |
| 6jptA00 | 3.30.230.90 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S5; domain 2 › | 0.52 | 37.0 | 3.08e-01 | 87.1% | 39.7% |
| 1zoyB01 | 3.10.20.30 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › Beta-grasp domain | 0.52 | 44.0 | 3.77e-01 | 100.0% | 77.4% |
| 5adxA01 | 3.30.420.40 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain | 0.52 | 42.0 | 3.22e-01 | 98.4% | 55.6% |
| 1s9iB01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.51 | 38.0 | 3.40e-01 | 80.6% | 88.2% |
| 3bzwF00 | 3.40.50.1110 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › SGNH hydrolase | 0.51 | 44.0 | 2.99e-01 | 98.4% | 39.9% |
| 1j3qB00 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.51 | 44.0 | 3.21e-01 | 100.0% | 33.9% |
ECOD (34)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4084879 | 3115.1.1.1 ↗ | a+b two layers › GP2-like › RplX-like › RplX-like › Ribosomal_L18A | 0.74 | 62.0 | 5.62e-01 | 100.0% | 68.2% |
| 3593797 | 3529.1.1.0 ↗ | beta sandwiches › Major vault protein (MVP) structural repeat domain › Major vault protein (MVP) structural repeat domain › Major vault protein (MVP) structural repeat domain | 0.72 | 51.0 | 5.39e-01 | 100.0% | 83.6% |
| 3987406 | 3115.6.1.1 ↗ | a+b two layers › GP2-like › Bacterial RNA polymerase subunit epsilon › Bacterial RNA polymerase subunit epsilon › RpoY | 0.71 | 61.0 | 5.74e-01 | 100.0% | 78.7% |
| 4128974 | 3115.1.1.1 ↗ | a+b two layers › GP2-like › RplX-like › RplX-like › Ribosomal_L18A | 0.70 | 59.0 | 5.45e-01 | 100.0% | 72.5% |
| 4941949 | 304.100.1.1 ↗ | a+b two layers › Alpha-beta plaits › PurS-like › PurS-like › PurS | 0.68 | 60.0 | 5.52e-01 | 96.8% | 97.5% |
| 4947546 | 304.100.1.0 ↗ | a+b two layers › Alpha-beta plaits › PurS-like › PurS-like | 0.67 | 60.0 | 5.39e-01 | 100.0% | 96.5% |
| 159110 | 304.100.1.1 ↗ | a+b two layers › Alpha-beta plaits › PurS-like › PurS-like › PurS | 0.67 | 60.0 | 5.43e-01 | 100.0% | 95.2% |
| 3579398 | 11.1.1.2 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › fn3 | 0.66 | 48.0 | 4.22e-01 | 100.0% | 51.6% |
| 3623001 | 284.2.1.0 ↗ | a+b two layers › FKBP-like › Chitinase insertion domain › Chitinase insertion domain | 0.65 | 56.0 | 5.20e-01 | 100.0% | 96.2% |
| 3851316 | 223.2.1.19 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like › Intu_longin_1 | 0.63 | 45.0 | 3.24e-01 | 74.2% | 46.5% |
| 3905094 | 302.1.1.1 ↗ | a+b two layers › Reverse ferredoxin › Lesion bypass DNA polymerase (Y-family), little finger domain › Lesion bypass DNA polymerase (Y-family), little finger domain › IMS_C | 0.63 | 54.0 | 4.28e-01 | 100.0% | 45.9% |
| 3338688 | 3115.1.1.0 ↗ | a+b two layers › GP2-like › RplX-like › RplX-like | 0.60 | 49.0 | 4.88e-01 | 100.0% | 89.2% |
| 5036138 | 10.1.2.0 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) | 0.60 | 53.0 | 4.71e-01 | 96.8% | 72.9% |
| 3252771 | 821.1.1.0 ↗ | a+b three layers › GIY-YIG endonuclease › GIY-YIG endonuclease › GIY-YIG endonuclease | 0.59 | 48.0 | 4.37e-01 | 100.0% | 65.9% |
| 4648475 | 3115.1.1.0 ↗ | a+b two layers › GP2-like › RplX-like › RplX-like | 0.59 | 48.0 | 4.89e-01 | 100.0% | 96.7% |
| 4867394 | 3820.1.1.1 ↗ | a+b complex topology › CRISPR-associated endonuclease Cas9 C-terminal domain › CRISPR-associated endonuclease Cas9 C-terminal domain › CRISPR-associated endonuclease Cas9 C-terminal domain › Cas9_PI | 0.58 | 49.0 | 4.23e-01 | 100.0% | 59.6% |
| 3943661 | 304.5.1.13 ↗ | a+b two layers › Alpha-beta plaits › GlnB-like › GlnB-like › DUF3574 | 0.58 | 48.0 | 4.25e-01 | 100.0% | 98.0% |
| 2388610 | 304.6.1.5 ↗ | a+b two layers › Alpha-beta plaits › FAD-linked oxidases, C-terminal domain › FAD-linked oxidases, C-terminal domain › Cytokin-bind | 0.58 | 48.0 | 3.23e-01 | 100.0% | 39.2% |
| 5030560 | 3268.1.1.0 ↗ | a+b two layers › N-terminal domain in xanthine dehydrogenase › N-terminal domain in xanthine dehydrogenase › N-terminal domain in xanthine dehydrogenase | 0.57 | 49.0 | 4.29e-01 | 100.0% | 98.0% |
| 3881982 | 2492.1.1.14 ↗ | a+b three layers › Cytidine deaminase-like › Cytidine deaminase-like › Cytidine deaminase-like › APOBEC_N | 0.56 | 48.0 | 3.48e-01 | 100.0% | 32.6% |
| 3987995 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.55 | 41.0 | 4.00e-01 | 80.6% | 74.3% |
| 3274364 | 560.1.1.0 ↗ | few secondary structure elements › H-NS histone-like proteins, C-terminal domain › H-NS histone-like proteins, C-terminal domain › H-NS histone-like proteins, C-terminal domain | 0.55 | 38.0 | 4.11e-01 | 100.0% | 93.9% |
| 3538625 | 304.7.1.4 ↗ | a+b two layers › Alpha-beta plaits › Protease propeptides/inhibitors › Protease propeptides/inhibitors › S8_pro-domain | 0.55 | 47.0 | 4.29e-01 | 100.0% | 97.6% |
| 3274898 | 3156.1.1.0 ↗ | beta sandwiches › Cupredoxin-like › Cupredoxin-related › Cupredoxin-related | 0.54 | 33.0 | 3.04e-01 | 100.0% | 43.5% |
| 4029586 | 10.32.1.203 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › Seipin | 0.54 | 45.0 | 3.52e-01 | 100.0% | 71.3% |
| 1002449 | 3662.1.1.1 ↗ | a+b two layers › Proteasome assembling chaperone 3 (PAC3)-related › Proteasome assembling chaperone 3 (PAC3)-related › Proteasome assembling chaperone 3 (PAC3)-related › PAC3 | 0.53 | 38.0 | 3.13e-01 | 87.1% | 39.3% |
| 3251650 | 10.2.1.84 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Seipin | 0.53 | 40.0 | 3.08e-01 | 85.5% | 85.2% |
| 3992476 | 1116.1.1.2 ↗ | a+b two layers › Polycystin-mucolipin domain › Polycystin-mucolipin domain › Polycystin-mucolipin domain › MCLN_ECD | 0.53 | 47.0 | 3.58e-01 | 100.0% | 51.0% |
| 3714926 | 3529.1.1.1 ↗ | beta sandwiches › Major vault protein (MVP) structural repeat domain › Major vault protein (MVP) structural repeat domain › Major vault protein (MVP) structural repeat domain › Vault | 0.53 | 35.0 | 3.77e-01 | 100.0% | 84.0% |
| 3742058 | 2005.1.1.0 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains | 0.53 | 42.0 | 2.54e-01 | 91.9% | 15.7% |
| 4387576 | 304.5.1.1 ↗ | a+b two layers › Alpha-beta plaits › GlnB-like › GlnB-like › P-II | 0.52 | 43.0 | 3.76e-01 | 100.0% | 87.6% |
| 3486745 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.52 | 46.0 | 3.60e-01 | 100.0% | 48.1% |
| 3824339 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.52 | 43.0 | 3.21e-01 | 100.0% | 35.2% |
| 1145775 | 3268.1.1.1 ↗ | a+b two layers › N-terminal domain in xanthine dehydrogenase › N-terminal domain in xanthine dehydrogenase › N-terminal domain in xanthine dehydrogenase › XdhC_CoxI | 0.51 | 43.0 | 3.96e-01 | 98.4% | 82.4% |