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NC_015262.1__YP_004306108.1__phiCD6356_07__00007
Bact-VirNC_015262.1__YP_004306108.1__phiCD6356_07__00007
Identity
- Accession:
- NC_015262 ↗
- Kingdom:
- phage
Quality
89.1
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 12-108
Domain cluster:
rep: LC625742.1__BCU41230.1__X__00055__D20-104
CATH (36)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2pp6A02 | 2.40.10.210 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Phage tail proteins (gpFII-like) | 0.81 | 51.0 | 6.31e-01 | 99.0% | 98.4% |
| 2kz4A00 | 2.40.10.270 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Bacteriophage SPP1 head-tail adaptor protein | 0.72 | 66.0 | 6.28e-01 | 100.0% | 91.1% |
| 3k6yA01 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.68 | 47.0 | 4.85e-01 | 100.0% | 75.0% |
| 3kyfA02 | 2.40.10.220 | Mainly Beta › Beta Barrel › Thrombin, subunit H › predicted glycosyltransferase like domains | 0.67 | 53.0 | 4.94e-01 | 100.0% | 68.4% |
| 2ra1A04 | 2.60.40.1220 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.67 | 41.0 | 4.19e-01 | 71.1% | 62.9% |
| 1yy3A02 | 2.40.10.240 | Mainly Beta › Beta Barrel › Thrombin, subunit H › QueA-like | 0.66 | 45.0 | 4.47e-01 | 100.0% | 67.7% |
| 3fawA01 | 2.60.40.1220 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.65 | 39.0 | 4.08e-01 | 72.2% | 64.1% |
| 3gs9A01 | 6.20.110.10 | Special › Other non-globular › Thrombin, subunit H › | 0.65 | 50.0 | 5.45e-01 | 99.0% | 100.0% |
| 3nziA01 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.64 | 47.0 | 4.64e-01 | 100.0% | 71.7% |
| 6toaE01 | 2.40.10.270 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Bacteriophage SPP1 head-tail adaptor protein | 0.63 | 57.0 | 5.75e-01 | 96.9% | 100.0% |
| 2zu2A01 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.63 | 47.0 | 4.74e-01 | 100.0% | 77.6% |
| 4p02A03 | 2.40.10.220 | Mainly Beta › Beta Barrel › Thrombin, subunit H › predicted glycosyltransferase like domains | 0.62 | 50.0 | 4.63e-01 | 100.0% | 68.0% |
| 3f3bA00 | 2.40.10.370 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Protein of unknown function DUF3599 | 0.60 | 56.0 | 5.25e-01 | 100.0% | 93.0% |
| 2c9aA02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.59 | 38.0 | 3.87e-01 | 71.1% | 64.9% |
| 3tviA02 | 3.30.2130.10 | Alpha Beta › 2-Layer Sandwich › VC0802-like › VC0802-like | 0.59 | 40.0 | 3.43e-01 | 70.1% | 84.9% |
| 2kcaA00 | 2.40.10.270 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Bacteriophage SPP1 head-tail adaptor protein | 0.59 | 53.0 | 5.12e-01 | 100.0% | 89.0% |
| 3szeA01 | 2.40.10.120 | Mainly Beta › Beta Barrel › Thrombin, subunit H › | 0.57 | 50.0 | 3.57e-01 | 100.0% | 66.2% |
| 1yoaA00 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.56 | 52.0 | 4.34e-01 | 100.0% | 75.5% |
| 3fgeA01 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.56 | 51.0 | 4.18e-01 | 100.0% | 73.3% |
| 2d37A00 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.56 | 51.0 | 4.32e-01 | 100.0% | 74.2% |
| 1rz1A00 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.56 | 50.0 | 4.33e-01 | 100.0% | 75.0% |
| 1i0rA00 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.55 | 50.0 | 4.22e-01 | 100.0% | 75.2% |
| 2r6vA01 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.55 | 50.0 | 4.19e-01 | 100.0% | 73.2% |
| 1y12B00 | 2.30.110.20 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Hcp1-like | 0.55 | 50.0 | 4.24e-01 | 100.0% | 76.9% |
| 3pftA00 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.54 | 48.0 | 4.16e-01 | 100.0% | 75.0% |
| 4ci2B02 | 2.30.130.40 | Mainly Beta › Roll › Archaeosine Trna-guanine Transglycosylase; Chain: A, domain 4 › LON domain-like | 0.54 | 47.0 | 4.31e-01 | 93.8% | 72.8% |
| 1wxrA01 | 2.40.10.120 | Mainly Beta › Beta Barrel › Thrombin, subunit H › | 0.54 | 48.0 | 3.59e-01 | 100.0% | 78.2% |
| 4f07E00 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.54 | 48.0 | 4.22e-01 | 100.0% | 76.5% |
| 3nfwA00 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.54 | 47.0 | 3.92e-01 | 100.0% | 65.4% |
| 2x8kA01 | 2.40.30.200 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › | 0.53 | 46.0 | 4.51e-01 | 100.0% | 87.6% |
| 1uscA00 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.53 | 48.0 | 3.93e-01 | 100.0% | 68.0% |
| 4rzkA00 | 2.60.40.790 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.53 | 37.0 | 3.90e-01 | 72.2% | 92.0% |
| 4rt0A00 | 2.40.10.220 | Mainly Beta › Beta Barrel › Thrombin, subunit H › predicted glycosyltransferase like domains | 0.51 | 41.0 | 3.97e-01 | 100.0% | 77.1% |
| 2kmwA01 | 2.60.40.790 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.51 | 34.0 | 3.40e-01 | 70.1% | 72.1% |
| 6vbkA01 | 2.30.130.40 | Mainly Beta › Roll › Archaeosine Trna-guanine Transglycosylase; Chain: A, domain 4 › LON domain-like | 0.50 | 37.0 | 3.61e-01 | 79.4% | 80.2% |
| 5e7gA02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.50 | 34.0 | 3.53e-01 | 70.1% | 75.6% |
ECOD (50)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3587815 | 1.1.13.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins | 0.82 | 77.0 | 7.51e-01 | 100.0% | 94.3% |
| 3963092 | 1.1.5.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel | 0.78 | 55.0 | 5.57e-01 | 100.0% | 73.7% |
| 4032900 | 1.1.13.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins | 0.77 | 72.0 | 6.98e-01 | 100.0% | 98.1% |
| 4032883 | 1.1.13.3 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Phage_H_T_join | 0.77 | 71.0 | 6.96e-01 | 100.0% | 95.2% |
| 3975275 | 1.1.13.15 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Gifsy-2 | 0.77 | 55.0 | 5.56e-01 | 100.0% | 74.7% |
| 4034130 | 1.1.13.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins | 0.74 | 66.0 | 6.56e-01 | 100.0% | 95.0% |
| 119252 | 1.1.13.3 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Phage_H_T_join | 0.72 | 66.0 | 6.28e-01 | 100.0% | 91.1% |
| 4669352 | 1.1.13.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins | 0.71 | 63.0 | 6.07e-01 | 100.0% | 84.5% |
| 3943285 | 1.1.13.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins | 0.69 | 64.0 | 6.18e-01 | 100.0% | 97.2% |
| 3058418 | 1.1.13.2 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Phage_attach | 0.68 | 55.0 | 5.45e-01 | 100.0% | 81.4% |
| 4954563 | 1.1.13.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins | 0.68 | 56.0 | 5.94e-01 | 99.0% | 98.8% |
| 1878750 | 11.1.1.171 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Big_5 | 0.67 | 42.0 | 4.25e-01 | 72.2% | 63.9% |
| 185291 | 1.1.13.20 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Prophage_tailD1 | 0.65 | 51.0 | 5.52e-01 | 100.0% | 100.0% |
| 5003311 | 1.1.13.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins | 0.65 | 60.0 | 5.78e-01 | 100.0% | 97.3% |
| 3289002 | 206.1.1.20 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › PK_Tyr_Ser-Thr | 0.65 | 42.0 | 2.83e-01 | 100.0% | 18.5% |
| 3513184 | 1.1.5.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel | 0.64 | 52.0 | 3.91e-01 | 100.0% | 36.9% |
| 4092486 | 1.1.17.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 | 0.64 | 42.0 | 3.45e-01 | 100.0% | 35.6% |
| 4487049 | 1.1.5.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel | 0.64 | 42.0 | 3.47e-01 | 100.0% | 36.6% |
| 2642578 | 1.1.13.3 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Phage_H_T_join | 0.64 | 60.0 | 5.72e-01 | 100.0% | 92.7% |
| 3272845 | 206.1.1.70 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase, ABC1 | 0.64 | 42.0 | 2.77e-01 | 70.1% | 17.1% |
| 4257535 | 1.1.5.25 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › PilZ | 0.64 | 48.0 | 4.58e-01 | 100.0% | 67.8% |
| 4031786 | 1.1.13.20 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Prophage_tailD1 | 0.63 | 52.0 | 5.56e-01 | 96.9% | 100.0% |
| 4883825 | 1.1.13.20 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Prophage_tailD1 | 0.63 | 54.0 | 5.52e-01 | 100.0% | 95.7% |
| 1309427 | 1.1.5.13 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Peptidase_S6 | 0.61 | 55.0 | 4.08e-01 | 100.0% | 80.6% |
| 3416144 | 1.1.17.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 | 0.60 | 53.0 | 4.13e-01 | 96.9% | 87.1% |
| 140973 | 1.1.17.3 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin_2 | 0.60 | 53.0 | 4.10e-01 | 100.0% | 82.4% |
| 169594 | 1.1.13.14 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › DUF3599 | 0.60 | 56.0 | 5.25e-01 | 100.0% | 93.0% |
| 3715260 | 206.1.1.78 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase, Kinase-like | 0.60 | 42.0 | 3.74e-01 | 100.0% | 51.4% |
| 119197 | 1.1.13.3 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Phage_H_T_join | 0.59 | 53.0 | 5.12e-01 | 100.0% | 89.0% |
| 3254065 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.59 | 37.0 | 3.63e-01 | 74.2% | 58.1% |
| 5051220 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.58 | 40.0 | 4.12e-01 | 74.2% | 75.6% |
| 4995815 | 1.1.13.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins | 0.57 | 52.0 | 4.74e-01 | 100.0% | 75.2% |
| 3331837 | 206.1.1.1 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase | 0.57 | 43.0 | 3.23e-01 | 100.0% | 33.5% |
| 3611892 | 1.1.5.33 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Trypsin_2 | 0.56 | 49.0 | 4.00e-01 | 100.0% | 92.1% |
| 3274538 | 11.1.1.698 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Ig_TgrO1 | 0.55 | 35.0 | 3.67e-01 | 71.1% | 71.8% |
| 4260208 | 1.1.13.62 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › PF27197 | 0.55 | 49.0 | 4.84e-01 | 96.9% | 100.0% |
| 5013196 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.54 | 37.0 | 3.74e-01 | 100.0% | 70.5% |
| 3977382 | 1.1.13.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins | 0.54 | 48.0 | 4.86e-01 | 99.0% | 97.9% |
| 1320672 | 1.1.9.5 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain › LON_substr_bdg | 0.54 | 47.0 | 3.40e-01 | 93.8% | 34.6% |
| 4949592 | 873.1.1.22 ↗ | a+b complex topology › H-NOX domain › H-NOX domain › H-NOX domain › PF25939 | 0.54 | 47.0 | 3.80e-01 | 96.9% | 84.1% |
| 4033714 | 1.1.13.7 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Prophage_tail | 0.54 | 44.0 | 4.54e-01 | 94.8% | 90.5% |
| 3058416 | 1.1.5.39 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › TssD | 0.54 | 50.0 | 4.53e-01 | 100.0% | 85.0% |
| 2060704 | 1.1.5.13 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Peptidase_S6 | 0.53 | 48.0 | 3.52e-01 | 100.0% | 78.6% |
| 4413783 | 1.1.9.5 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain › LON_substr_bdg | 0.53 | 40.0 | 3.08e-01 | 82.5% | 38.3% |
| 3942090 | 1.1.5.77 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Phage_tube | 0.53 | 49.0 | 4.04e-01 | 100.0% | 74.5% |
| 4629425 | 11.1.1.1369 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › DUF1410 | 0.53 | 36.0 | 3.72e-01 | 72.2% | 72.6% |
| 1954221 | 2.26.1.1 ↗ | beta barrels › OB-fold › Arcadin-1 › Arcadin-1 › Arcadin_1 | 0.52 | 30.0 | 3.32e-01 | 100.0% | 70.7% |
| 4586641 | 1.1.9.5 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain › LON_substr_bdg | 0.52 | 44.0 | 3.25e-01 | 92.8% | 36.7% |
| 4930489 | 1.1.9.23 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain › DUF473 | 0.52 | 38.0 | 3.67e-01 | 76.3% | 71.6% |
| 3399218 | 4081.1.1.5 ↗ | beta sandwiches › Baculovirus p35 protein-related › Baculovirus p35 protein-related › Baculovirus p35 protein-related › Peptidase_M1_N | 0.52 | 36.0 | 2.83e-01 | 73.2% | 48.6% |
D2
high
residues 115-215
Domain cluster:
rep: NC_073317.1__YP_010749072.1__QCF72_gp16__00016__D4-119
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF05521.19 best | Phage_HCP | 35.6 | 1.60e-08 | 92.1% | 68.9% |
CATH (28)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 6toaE01 | 2.40.10.270 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Bacteriophage SPP1 head-tail adaptor protein | 0.74 | 67.0 | 6.85e-01 | 97.0% | 100.0% |
| 2kz4A00 | 2.40.10.270 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Bacteriophage SPP1 head-tail adaptor protein | 0.73 | 69.0 | 6.68e-01 | 100.0% | 90.2% |
| 3gs9A01 | 6.20.110.10 | Special › Other non-globular › Thrombin, subunit H › | 0.72 | 54.0 | 6.03e-01 | 99.0% | 100.0% |
| 3nziA01 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.70 | 51.0 | 5.08e-01 | 100.0% | 72.6% |
| 2o8lA02 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.70 | 54.0 | 5.44e-01 | 100.0% | 81.2% |
| 3kyfA02 | 2.40.10.220 | Mainly Beta › Beta Barrel › Thrombin, subunit H › predicted glycosyltransferase like domains | 0.68 | 52.0 | 4.92e-01 | 100.0% | 69.2% |
| 2kcaA00 | 2.40.10.270 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Bacteriophage SPP1 head-tail adaptor protein | 0.66 | 57.0 | 5.61e-01 | 100.0% | 89.0% |
| 2bhgA01 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.65 | 47.0 | 4.90e-01 | 100.0% | 83.7% |
| 3oo2A01 | 2.40.37.10 | Mainly Beta › Beta Barrel › Lyase, Ornithine Decarboxylase; Chain A, domain 1 › Lyase, Ornithine Decarboxylase; Chain A, domain 1 | 0.62 | 47.0 | 4.10e-01 | 100.0% | 54.0% |
| 5cenA01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.61 | 37.0 | 4.10e-01 | 100.0% | 78.2% |
| 3fgeA01 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.60 | 54.0 | 4.52e-01 | 100.0% | 73.3% |
| 1a6aB02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.59 | 39.0 | 3.96e-01 | 76.2% | 68.4% |
| 4lusB01 | 2.40.37.10 | Mainly Beta › Beta Barrel › Lyase, Ornithine Decarboxylase; Chain A, domain 1 › Lyase, Ornithine Decarboxylase; Chain A, domain 1 | 0.59 | 46.0 | 4.00e-01 | 100.0% | 55.7% |
| 5yycA01 | 2.40.37.10 | Mainly Beta › Beta Barrel › Lyase, Ornithine Decarboxylase; Chain A, domain 1 › Lyase, Ornithine Decarboxylase; Chain A, domain 1 | 0.57 | 45.0 | 4.05e-01 | 100.0% | 62.2% |
| 3k6yA02 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.56 | 44.0 | 4.37e-01 | 100.0% | 80.4% |
| 2mklC00 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.55 | 36.0 | 3.64e-01 | 76.2% | 64.8% |
| 4gucA00 | 2.60.40.3720 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.54 | 35.0 | 3.42e-01 | 84.2% | 57.4% |
| 5zl6A01 | 2.40.37.10 | Mainly Beta › Beta Barrel › Lyase, Ornithine Decarboxylase; Chain A, domain 1 › Lyase, Ornithine Decarboxylase; Chain A, domain 1 | 0.54 | 46.0 | 4.00e-01 | 100.0% | 61.6% |
| 4eqmA01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.54 | 37.0 | 3.94e-01 | 100.0% | 80.9% |
| 4gn2A00 | 3.40.710.10 | Alpha Beta › 3-Layer(aba) Sandwich › Beta-lactamase › DD-peptidase/beta-lactamase superfamily | 0.54 | 33.0 | 2.50e-01 | 100.0% | 25.8% |
| 3co8A01 | 2.40.37.10 | Mainly Beta › Beta Barrel › Lyase, Ornithine Decarboxylase; Chain A, domain 1 › Lyase, Ornithine Decarboxylase; Chain A, domain 1 | 0.53 | 44.0 | 3.89e-01 | 100.0% | 62.2% |
| 3kw3B01 | 2.40.37.10 | Mainly Beta › Beta Barrel › Lyase, Ornithine Decarboxylase; Chain A, domain 1 › Lyase, Ornithine Decarboxylase; Chain A, domain 1 | 0.52 | 45.0 | 3.96e-01 | 100.0% | 65.3% |
| 1r3eA01 | 3.30.2350.10 | Alpha Beta › 2-Layer Sandwich › Pseudouridine synthase › Pseudouridine synthase | 0.51 | 42.0 | 3.36e-01 | 92.1% | 43.9% |
| 3nrfA00 | 2.60.40.4110 | Mainly Beta › Sandwich › Immunoglobulin-like › Protein of unknown function DUF4354 | 0.51 | 38.0 | 3.81e-01 | 79.2% | 81.4% |
| 4wksC02 | 2.30.120.10 | Mainly Beta › Roll › Penicillin G acylase, beta-roll domain › Aminohydrolase, N-terminal nucleophile (Ntn) domain, beta-sheet knob region | 0.51 | 34.0 | 3.82e-01 | 84.2% | 90.7% |
| 5i4nA01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.51 | 37.0 | 3.86e-01 | 100.0% | 83.7% |
| 4beuA01 | 2.40.37.10 | Mainly Beta › Beta Barrel › Lyase, Ornithine Decarboxylase; Chain A, domain 1 › Lyase, Ornithine Decarboxylase; Chain A, domain 1 | 0.51 | 45.0 | 3.76e-01 | 100.0% | 56.6% |
| 1rcqA01 | 2.40.37.10 | Mainly Beta › Beta Barrel › Lyase, Ornithine Decarboxylase; Chain A, domain 1 › Lyase, Ornithine Decarboxylase; Chain A, domain 1 | 0.50 | 44.0 | 3.92e-01 | 100.0% | 66.7% |
ECOD (21)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4954563 | 1.1.13.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins | 0.75 | 59.0 | 6.43e-01 | 99.0% | 98.8% |
| 2642578 | 1.1.13.3 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Phage_H_T_join | 0.74 | 69.0 | 6.75e-01 | 100.0% | 91.8% |
| 4879695 | 1.1.13.29 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › E217_gp28 | 0.73 | 67.0 | 6.13e-01 | 100.0% | 76.5% |
| 4032883 | 1.1.13.3 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Phage_H_T_join | 0.73 | 67.0 | 6.64e-01 | 100.0% | 94.3% |
| 4034130 | 1.1.13.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins | 0.73 | 64.0 | 6.49e-01 | 100.0% | 94.0% |
| 3288253 | 1.1.13.55 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › DUF4873 | 0.72 | 55.0 | 5.79e-01 | 100.0% | 90.0% |
| 3943285 | 1.1.13.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins | 0.72 | 68.0 | 6.63e-01 | 100.0% | 97.2% |
| 4141852 | 1.1.13.56 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › YQBQ | 0.72 | 57.0 | 6.14e-01 | 100.0% | 98.8% |
| 3587815 | 1.1.13.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins | 0.71 | 65.0 | 6.46e-01 | 100.0% | 94.3% |
| 4032900 | 1.1.13.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins | 0.71 | 66.0 | 6.56e-01 | 100.0% | 97.1% |
| 3949274 | 1.1.13.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins | 0.71 | 64.0 | 6.13e-01 | 100.0% | 89.6% |
| 4669352 | 1.1.13.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins | 0.70 | 60.0 | 5.87e-01 | 100.0% | 84.5% |
| 4260208 | 1.1.13.62 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › PF27197 | 0.66 | 60.0 | 5.94e-01 | 97.0% | 100.0% |
| 119197 | 1.1.13.3 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Phage_H_T_join | 0.66 | 57.0 | 5.61e-01 | 100.0% | 89.0% |
| 5082328 | 1.1.13.77 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Phage_H_T_join_3 | 0.66 | 57.0 | 5.94e-01 | 98.0% | 98.9% |
| 3597372 | 1.1.17.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 | 0.61 | 54.0 | 3.96e-01 | 100.0% | 43.5% |
| 3933576 | 11.1.1.9 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Arrestin_N | 0.60 | 36.0 | 2.87e-01 | 76.2% | 29.2% |
| 3881484 | 1.1.5.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel | 0.58 | 51.0 | 4.61e-01 | 100.0% | 97.9% |
| 3622133 | 1.1.9.5 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain › LON_substr_bdg | 0.55 | 43.0 | 3.22e-01 | 84.2% | 33.6% |
| 4395919 | 11.1.1.66 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › MdoG | 0.53 | 38.0 | 3.63e-01 | 78.2% | 62.4% |
| 5061502 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.52 | 34.0 | 3.25e-01 | 83.2% | 57.4% |