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NC_015280.1__YP_004322478.1__PHM1_053__00053

Bact-Vir

NC_015280.1__YP_004322478.1__PHM1_053__00053

Identity

Accession:
NC_015280 ↗
Kingdom:
phage

Quality

93.8 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 3-50
PDB
Domain cluster: representative
CATH (4)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2nr4A02 1.20.58.290 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Hypothetical membrane protein ta0354_69_121. 0.65 48.0 4.65e-01 85.4% 82.8%
5n17A01 1.20.920.10 Mainly Alpha › Up-down Bundle › Histone Acetyltransferase; Chain A › Bromodomain-like 0.58 48.0 3.80e-01 93.8% 73.1%
1gvnD00 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.54 45.0 2.86e-01 95.8% 43.0%
3cf6E01 1.10.8.1240 Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › 0.53 41.0 4.22e-01 89.6% 88.9%
ECOD (5)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3993717 109.4.1.123 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › U3_assoc_6 0.69 60.0 3.40e-01 100.0% 10.0%
3926411 109.4.1.0 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.65 53.0 4.29e-01 100.0% 76.2%
4615565 101.1.1.249 alpha arrays › HTH › HTH › Three-helical HTH › SGIII 0.54 42.0 3.74e-01 100.0% 71.8%
3427630 145.1.1.0 alpha arrays › F-box domain › F-box domain › F-box domain 0.50 36.0 3.63e-01 85.4% 80.0%
4930093 103.1.1.0 alpha arrays › RuvA-C › RuvA-C, UBA, CRAL/TRIO-N, HBS1 › UBA-like domain 0.50 36.0 3.55e-01 70.8% 68.0%