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NC_015286.1__YP_004323852.1__Syn19_014__00014
Bact-VirNC_015286.1__YP_004323852.1__Syn19_014__00014
Identity
- Accession:
- NC_015286 ↗
- Kingdom:
- phage
Quality
45.3
mean pLDDT
Taxonomy
Heunggongvirae›
Uroviricota›
Caudoviricetes›
Pantevenvirales›
Kyanoviridae›
Pontusvirus›
Synechococcus_phage_Syn19
TaxID: 445684
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 1-55
D2
medium
residues 107-213
D3
medium
residues 501-578
D4
medium
residues 748-838
Domain cluster:
rep: NC_013021.1__YP_003084158.1__PSS2_gp014__00014__D65-154
D5
medium
residues 839-942
Domain cluster:
representative
CATH (3)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1wgqA00 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.56 | 35.0 | 3.49e-01 | 95.2% | 59.6% |
| 7yulA01 | 1.10.10.2590 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › BEN domain | 0.53 | 35.0 | 3.75e-01 | 87.5% | 81.2% |
| 1gkuB06 | 1.10.460.10 | Mainly Alpha › Orthogonal Bundle › Topoisomerase I; domain 2 › Topoisomerase I, domain 2 | 0.53 | 39.0 | 3.43e-01 | 77.9% | 94.2% |
ECOD (2)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3598647 | 632.19.1.0 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Choline binding protein A › Choline binding protein A | 0.63 | 33.0 | 3.64e-01 | 73.1% | 62.4% |
| 3654522 | 166.1.1.1 ↗ | alpha superhelices › 1-deoxy-D-xylulose-5-phosphate reductoisomerase-C › 1-deoxy-D-xylulose-5-phosphate reductoisomerase-C › 1-deoxy-D-xylulose-5-phosphate reductoisomerase-C › DXPR_C | 0.57 | 27.0 | 2.78e-01 | 71.2% | 43.8% |