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NC_015286.1__YP_004323852.1__Syn19_014__00014

Bact-Vir

NC_015286.1__YP_004323852.1__Syn19_014__00014

Identity

Accession:
NC_015286 ↗
Kingdom:
phage

Quality

45.3 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 1-55
PDB
D2 medium residues 107-213
PDB
D3 medium residues 501-578
PDB
D4 medium residues 748-838
PDB
D5 medium residues 839-942
PDB
Domain cluster: representative
CATH (3)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1wgqA00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.56 35.0 3.49e-01 95.2% 59.6%
7yulA01 1.10.10.2590 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › BEN domain 0.53 35.0 3.75e-01 87.5% 81.2%
1gkuB06 1.10.460.10 Mainly Alpha › Orthogonal Bundle › Topoisomerase I; domain 2 › Topoisomerase I, domain 2 0.53 39.0 3.43e-01 77.9% 94.2%
ECOD (2)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3598647 632.19.1.0 alpha bundles › immunoglobulin/albumin-binding domain-like › Choline binding protein A › Choline binding protein A 0.63 33.0 3.64e-01 73.1% 62.4%
3654522 166.1.1.1 alpha superhelices › 1-deoxy-D-xylulose-5-phosphate reductoisomerase-C › 1-deoxy-D-xylulose-5-phosphate reductoisomerase-C › 1-deoxy-D-xylulose-5-phosphate reductoisomerase-C › DXPR_C 0.57 27.0 2.78e-01 71.2% 43.8%