NC_015287.1__YP_004324085.1__SSSM7_032__00032

Bact-Vir

Identity

92.0 mean pLDDT

Heunggongvirae› Uroviricota› Caudoviricetes› Pantevenvirales› Kyanoviridae› Lipsvirus› Synechococcus_phage_S-SSM7

TaxID: 445686

Singleton — not in a non-trivial cluster

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high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 17-227

PDB

Domain cluster: representative

CATH (3)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
4r03A00	2.40.128.720	Mainly Beta › Beta Barrel › Lipocalin ›	0.59	30.0	4.07e-01	100.0%	93.6%
1yxsA01	3.30.200.20	Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1	0.54	24.0	3.42e-01	80.6%	90.2%
2i79D00	3.40.630.30	Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT)	0.50	31.0	3.44e-01	76.3%	75.4%

ECOD (6)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
141116	4194.1.1.1 ↗	a+b duplicates or obligate multimers › Prenyltransferase-like › Prenyltransferase-like › Prenyltransferase-like › PTase_Orf2	0.70	66.0	5.66e-01	100.0%	89.2%
4466226	5087.1.1.1 ↗	beta meanders › Lipovitellin-phosvitin complex › Lipovitellin LV-2 › Lipovitellin LV-2 › Vit_b-sht_shell	0.58	25.0	3.41e-01	70.6%	77.1%
4953347	375.1.1.299 ↗	few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › CPxCG_zf	0.56	15.0	3.06e-01	89.1%	96.0%
3061502	10.1.1.51 ↗	beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › M2AP_beta_dom	0.55	35.0	3.86e-01	87.2%	78.0%
3706182	3270.1.1.0 ↗	a+b two layers › a+b domain in heme oxygenase › a+b domain in heme oxygenase › a+b domain in heme oxygenase	0.51	22.0	3.06e-01	72.5%	80.0%
4973694	2004.1.1.0 ↗	a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases	0.50	46.0	3.96e-01	100.0%	78.8%

D2 medium residues 228-309

PDB

Domain cluster: representative

CATH (6)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
1zmbA02	6.10.170.10	Special › Helix non-globular › Non-ribosomal Peptide Synthetase Peptidyl Carrier Protein; Chain A ›	0.82	37.0	5.40e-01	72.0%	100.0%
4kb2A01	1.10.132.20	Mainly Alpha › Orthogonal Bundle › Topoisomerase I; Chain A, domain 4 › Ribosome-recycling factor	0.78	54.0	4.87e-01	72.0%	76.1%
1jswA01	1.10.275.10	Mainly Alpha › Orthogonal Bundle › Fumarase C; Chain B, domain 1 › Fumarase/aspartase (N-terminal domain)	0.57	47.0	3.96e-01	90.2%	79.6%
4hasA00	3.30.1520.10	Alpha Beta › 2-Layer Sandwich › PX Domain › Phox-like domain	0.54	40.0	3.70e-01	78.0%	82.7%
1tj7A01	1.10.275.10	Mainly Alpha › Orthogonal Bundle › Fumarase C; Chain B, domain 1 › Fumarase/aspartase (N-terminal domain)	0.53	44.0	4.09e-01	91.5%	77.1%
4l4qA03	3.30.300.10	Alpha Beta › 2-Layer Sandwich › GMP Synthetase; Chain A, domain 3 ›	0.51	39.0	3.36e-01	80.5%	85.6%

ECOD (7)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
3932435	5001.1.1.0 ↗	alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like	0.65	52.0	3.50e-01	89.0%	74.9%
3964909	3016.1.1.0 ↗	a+b two layers › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases	0.62	48.0	3.92e-01	82.9%	96.0%
4029392	375.1.1.179 ↗	few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › TFIIE_alpha	0.60	47.0	3.52e-01	82.9%	50.3%
4962836	5001.1.1.292 ↗	alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › HisKA_7TM	0.59	48.0	3.48e-01	90.2%	67.8%
3497617	221.4.1.0 ↗	a+b two layers › beta-Grasp › Nudix › Nudix	0.53	47.0	3.20e-01	96.3%	50.2%
4949473	5086.1.1.230 ↗	alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › ATP-synt_D	0.51	41.0	3.04e-01	86.6%	45.8%
3506687	304.48.1.17 ↗	a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like › DNA_pol_B_2	0.51	45.0	2.87e-01	98.8%	64.2%