←Back to structures
NC_015288.1__YP_004324460.1__Syn1_089__00088
Bact-VirNC_015288.1__YP_004324460.1__Syn1_089__00088
Identity
- Accession:
- NC_015288 ↗
- Kingdom:
- phage
Quality
81.1
mean pLDDT
Taxonomy
Heunggongvirae›
Uroviricota›
Caudoviricetes›
Pantevenvirales›
Kyanoviridae›
Vellamovirus›
Prochlorococcus_phage_Syn1
TaxID: 444861
Cluster
View cluster (2 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 4-116
Domain cluster:
representative
CATH (5)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4ku0D00 | 2.60.200.60 | Mainly Beta › Sandwich › Tumour Suppressor Smad4 › | 0.83 | 65.0 | 7.03e-01 | 99.1% | 96.9% |
| 1t9fA00 | 2.80.10.50 | Mainly Beta › Trefoil › Trefoil (Acidic Fibroblast Growth Factor, subunit A) › | 0.55 | 48.0 | 4.12e-01 | 94.7% | 97.2% |
| 4r3dA03 | 2.60.120.1680 | Mainly Beta › Sandwich › Jelly Rolls › | 0.53 | 28.0 | 2.65e-01 | 97.3% | 38.7% |
| 6oqrA01 | 2.40.30.20 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › | 0.52 | 29.0 | 3.26e-01 | 91.2% | 67.8% |
| 2jlpB00 | 2.60.40.200 | Mainly Beta › Sandwich › Immunoglobulin-like › Superoxide dismutase, copper/zinc binding domain | 0.51 | 44.0 | 3.94e-01 | 96.5% | 93.4% |
ECOD (2)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4957571 | 3174.3.1.1 ↗ | beta barrels › Ribosomal protein L14-like › PAAR-repeat protein › PAAR-repeat protein › PAAR_motif | 0.75 | 69.0 | 6.58e-01 | 99.1% | 96.9% |
| 3970456 | 3174.3.1.2 ↗ | beta barrels › Ribosomal protein L14-like › PAAR-repeat protein › PAAR-repeat protein › DUF4280 | 0.71 | 64.0 | 6.12e-01 | 99.1% | 96.2% |