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NC_015721.1__YP_004678832.1__BdPhPhi1402_gp05__00005
Bact-VirNC_015721.1__YP_004678832.1__BdPhPhi1402_gp05__00005
Identity
- Accession:
- NC_015721 ↗
- Kingdom:
- phage
Quality
79.6
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 3-59
Domain cluster:
representative
CATH (12)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1vryA00 | 6.10.250.2810 | Special › Helix non-globular › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › | 0.64 | 54.0 | 5.32e-01 | 98.2% | 96.7% |
| 2lfrA00 | 1.10.287.130 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Signal transduction histidine kinase, dimerisation/phosphotransfer (DHp) domain | 0.59 | 42.0 | 3.59e-01 | 98.2% | 42.3% |
| 3swhA01 | 1.10.357.50 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › | 0.58 | 47.0 | 3.44e-01 | 91.2% | 35.2% |
| 3ehfD01 | 1.20.5.1930 | Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › | 0.58 | 46.0 | 4.54e-01 | 91.2% | 81.0% |
| 1urfA00 | 1.10.287.160 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › HR1 repeat | 0.58 | 50.0 | 4.50e-01 | 100.0% | 98.8% |
| 1s8nA02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.58 | 40.0 | 4.00e-01 | 93.0% | 69.0% |
| 3bbyA02 | 1.20.1050.10 | Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › | 0.57 | 44.0 | 3.55e-01 | 86.0% | 41.9% |
| 1s4eG02 | 3.30.70.890 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › GHMP kinase, C-terminal domain | 0.57 | 47.0 | 3.61e-01 | 100.0% | 87.6% |
| 4c0kA01 | 1.10.238.10 | Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › EF-hand | 0.56 | 43.0 | 3.61e-01 | 84.2% | 78.2% |
| 3sjqC00 | 1.10.287.70 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.55 | 48.0 | 4.26e-01 | 94.7% | 70.0% |
| 3icxA01 | 1.10.287.660 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin | 0.54 | 44.0 | 4.14e-01 | 100.0% | 76.0% |
| 2kw6A00 | 6.10.140.1300 | Special › Helix non-globular › Helix Hairpins › | 0.50 | 42.0 | 4.10e-01 | 98.2% | 87.7% |
ECOD (8)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3558280 | 603.1.1.114 ↗ | alpha bundles › STAT-like › t-snare proteins › t-snare proteins › HR1 | 0.65 | 48.0 | 4.10e-01 | 87.7% | 48.4% |
| 3311177 | 605.4.1.0 ↗ | alpha duplicates or obligate multimers › ROP-like › ROP protein › ROP protein | 0.62 | 43.0 | 4.07e-01 | 100.0% | 60.0% |
| 3969336 | 5054.1.1.8 ↗ | alpha complex topology › Voltage-gated ion channels › Voltage-gated ion channels › Voltage-gated ion channels › Ion_trans_2 | 0.61 | 43.0 | 3.65e-01 | 82.5% | 44.0% |
| 3941447 | 4168.1.1.1 ↗ | alpha duplicates or obligate multimers › HAMP domain › HAMP domain › HAMP domain › HAMP | 0.59 | 45.0 | 4.23e-01 | 82.5% | 91.4% |
| 2491941 | 192.31.1.1 ↗ | alpha bundles › Long alpha-hairpin › CP12 › CP12 › CP12 | 0.58 | 46.0 | 4.93e-01 | 96.5% | 100.0% |
| 4638004 | 192.29.1.1 ↗ | alpha bundles › Long alpha-hairpin › bMERB domain (bivalent Mical/EHBP Rab binding) › bMERB domain (bivalent Mical/EHBP Rab binding) › bMERB_dom | 0.57 | 47.0 | 4.41e-01 | 91.2% | 87.1% |
| 4026684 | 192.20.1.7 ↗ | alpha bundles › Long alpha-hairpin › helical hairpin domain in transcriptional anti-activator ExsD › helical hairpin domain in transcriptional anti-activator ExsD › PF26729 | 0.57 | 47.0 | 3.84e-01 | 91.2% | 55.2% |
| 3969065 | 4168.1.1.1 ↗ | alpha duplicates or obligate multimers › HAMP domain › HAMP domain › HAMP domain › HAMP | 0.55 | 38.0 | 3.91e-01 | 73.7% | 76.4% |