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NC_016164.1__YP_004934620.1__S-CBS1_gp20__00020

Bact-Vir

NC_016164.1__YP_004934620.1__S-CBS1_gp20__00020

Identity

Accession:
NC_016164 ↗
Kingdom:
phage

Quality

84.6 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 13-56
PDB
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF18454.8 best Mtd_N 44.9 1.20e-11 81.8% 89.2%
D2 medium residues 69-120
PDB
Domain cluster: representative
CATH (5)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4yy8A02 2.120.10.80 Mainly Beta › 6 Propeller › Neuraminidase › Kelch-type beta propeller 0.54 46.0 2.91e-01 100.0% 52.3%
4nehA01 2.130.10.130 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › Integrin alpha, N-terminal 0.52 44.0 2.64e-01 94.2% 90.3%
2iieA01 4.10.520.10 Few Secondary Structures › Irregular › HU Protein; Chain A › IHF-like DNA-binding proteins 0.52 35.0 2.85e-01 73.1% 47.2%
4dlqA03 2.60.220.50 Mainly Beta › Sandwich › Chondroitinase Ac; Chain A, domain 3 › 0.51 39.0 2.81e-01 94.2% 96.5%
2ewlA00 3.30.160.330 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.51 31.0 3.04e-01 75.0% 53.6%
ECOD (2)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3816372 5.1.4.550 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Kelch_FKB95 0.54 40.0 2.65e-01 86.5% 35.2%
3993237 387.1.5.24 few secondary structure elements › omega toxin-like › omega toxin-related › Scorpion toxin-like › Lustrin_cystein 0.51 40.0 3.65e-01 90.4% 66.2%
D3 medium residues 127-177
PDB