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NC_016571.1__YP_004958191.1__OBP_284__00284
Bact-VirNC_016571.1__YP_004958191.1__OBP_284__00284
Identity
- Accession:
- NC_016571 ↗
- Kingdom:
- phage
Quality
73.4
mean pLDDT
Taxonomy
TaxID: 1124849
Cluster
View cluster (2 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 56-165
Domain cluster:
rep: OR493421.1__WNY41022.1__X__00138__D25-130
CATH (9)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4zvaA00 | 1.10.490.10 | Mainly Alpha › Orthogonal Bundle › Globin-like › Globins | 0.59 | 44.0 | 3.95e-01 | 77.3% | 85.9% |
| 4aidA02 | 1.10.10.400 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Polyribonucleotide nucleotidyltransferase, RNA-binding domain | 0.59 | 36.0 | 4.08e-01 | 85.5% | 81.7% |
| 1ivhA03 | 1.20.140.10 | Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › Butyryl-CoA Dehydrogenase, subunit A, domain 3 | 0.58 | 40.0 | 3.66e-01 | 70.0% | 80.9% |
| 1dk8A02 | 1.10.167.10 | Mainly Alpha › Orthogonal Bundle › Regulator of G-protein Signalling 4; domain 2 › Regulator of G-protein Signalling 4, domain 2 | 0.57 | 41.0 | 4.52e-01 | 100.0% | 97.6% |
| 3a98B01 | 6.10.10.90 | Special › Helix non-globular › Helicase, Ruva Protein; domain 3 › | 0.56 | 33.0 | 3.74e-01 | 98.2% | 77.8% |
| 1yo7A00 | 1.20.120.230 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Alpha-catenin/vinculin-like | 0.53 | 37.0 | 3.68e-01 | 73.6% | 82.5% |
| 4p79A00 | 1.20.140.150 | Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › | 0.52 | 38.0 | 3.20e-01 | 75.5% | 78.5% |
| 1blwC00 | 1.20.1250.10 | Mainly Alpha › Up-down Bundle › Growth Hormone; Chain: A; › | 0.51 | 43.0 | 3.96e-01 | 90.0% | 70.2% |
| 2ib0A01 | 1.20.1260.10 | Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle | 0.50 | 36.0 | 3.41e-01 | 74.5% | 97.8% |
ECOD (8)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4020016 | 129.1.1.11 ↗ | alpha arrays › 6-phosphogluconate dehydrogenase C-terminal domain-like › 6-phosphogluconate dehydrogenase C-terminal domain-like › 6-phosphogluconate dehydrogenase C-terminal domain-like › ApbA_C | 0.61 | 43.0 | 4.73e-01 | 81.8% | 94.1% |
| 4615235 | 101.11.1.1 ↗ | alpha arrays › HTH › Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 › Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 › PNPase | 0.57 | 38.0 | 4.07e-01 | 81.8% | 78.9% |
| 4033997 | 4070.1.1.3 ↗ | alpha arrays › FtsH protease domain-like › FtsH protease domain-like › FtsH protease domain-like › DUF3267 | 0.56 | 42.0 | 3.77e-01 | 79.1% | 71.6% |
| 3268032 | 192.29.1.0 ↗ | alpha bundles › Long alpha-hairpin › bMERB domain (bivalent Mical/EHBP Rab binding) › bMERB domain (bivalent Mical/EHBP Rab binding) | 0.54 | 44.0 | 4.34e-01 | 99.1% | 80.0% |
| 3934868 | 168.1.1.0 ↗ | alpha arrays › Sec7 domain › Sec7 domain › Sec7 domain | 0.54 | 48.0 | 4.52e-01 | 100.0% | 79.3% |
| 3697273 | 109.3.1.179 ↗ | alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › DUF7708 | 0.54 | 40.0 | 3.31e-01 | 78.2% | 72.5% |
| 3986405 | 604.39.1.26 ↗ | alpha bundles › Spectrin repeat-like › S-component of energy-coupling factor (ECF) transporters › S-component of energy-coupling factor (ECF) transporters › 5TM-5TMR_LYT | 0.54 | 47.0 | 3.95e-01 | 99.1% | 89.7% |
| 3178386 | 246.2.1.15 ↗ | a+b four layers › Carbon-nitrogen hydrolase-like › Metallo-dependent phosphatases › Metallo-dependent phosphatases › PhoD_2 | 0.50 | 45.0 | 2.98e-01 | 100.0% | 54.2% |
D2
medium
residues 40-55_168-218