NC_016650.1__YP_005087004.1__RoPhRGL3_gp46__00046

Bact-Vir

Identity

87.0 mean pLDDT

Heunggongvirae› Uroviricota› Caudoviricetes› Rerduovirus› Rhodococcus_phage_RGL3

TaxID: 2922221

Singleton — not in a non-trivial cluster

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high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 7-113

PDB

Domain cluster: representative

CATH (3)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
5yixA00	1.10.601.10	Mainly Alpha › Orthogonal Bundle › RNA Polymerase Primary Sigma Factor › RNA Polymerase Primary Sigma Factor	0.57	42.0	2.98e-01	77.6%	54.3%
4f0uA00	1.10.490.20	Mainly Alpha › Orthogonal Bundle › Globin-like › Phycocyanins	0.53	38.0	3.34e-01	74.8%	65.0%
1kn1B00	1.10.490.20	Mainly Alpha › Orthogonal Bundle › Globin-like › Phycocyanins	0.51	36.0	3.17e-01	74.8%	62.7%

ECOD (4)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
3940244	5001.1.1.35 ↗	alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › 7TM_GPCR_Srsx	0.59	46.0	3.40e-01	86.0%	54.8%
4234968	3291.1.1.0 ↗	alpha bundles › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related	0.55	45.0	4.24e-01	88.8%	88.5%
4878766	1075.4.1.9 ↗	alpha bundles › Type II ABC exporter transmembrane domain fold › Type I ABC exporter transmembrane domain fold › Type I ABC exporter transmembrane domain fold › ABC_tran+ABC_membrane	0.53	38.0	3.66e-01	80.4%	64.8%
3497154	109.4.1.0 ↗	alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat	0.50	40.0	3.01e-01	87.9%	67.6%